RNA–Protein interactions for RNA: ENST00000490731.1

DEPDC5-218, Transcript of DEP domain containing 5, humanhuman

TSL 4

Gene DEPDC5, Length 602 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-218ENST00000490731 SMC1BQ8NDV3 1235 aa12.43□□□□□ -0.42
DEPDC5-218ENST00000490731 HMMRO75330 724 aa12.42□□□□□ -0.42
DEPDC5-218ENST00000490731 DDNO94850 711 aaPredicted RBP12.42□□□□□ -0.42
DEPDC5-218ENST00000490731 PCCAP05165 728 aaPredicted RBP12.42□□□□□ -0.42
DEPDC5-218ENST00000490731 NIM1KQ8IY84 436 aa12.42□□□□□ -0.42
DEPDC5-218ENST00000490731 MPNDQ8N594 471 aa12.42□□□□□ -0.42
DEPDC5-218ENST00000490731 VPS33BQ9H267 617 aa12.42□□□□□ -0.42
DEPDC5-218ENST00000490731 LRRFIP2Q9Y608 721 aaKnown RBP12.42□□□□□ -0.42
DEPDC5-218ENST00000490731 PPIP5K2O43314 1243 aa12.41□□□□□ -0.42
DEPDC5-218ENST00000490731 PDE8AO60658 829 aa12.41□□□□□ -0.42
DEPDC5-218ENST00000490731 APLP1P51693 650 aa12.41□□□□□ -0.42
DEPDC5-218ENST00000490731 CCDC152Q4G0S7 254 aa12.41□□□□□ -0.42
DEPDC5-218ENST00000490731 SIRT2Q8IXJ6 389 aa12.41□□□□□ -0.42
DEPDC5-218ENST00000490731 SNED1Q8TER0 1413 aa12.41□□□□□ -0.42
DEPDC5-218ENST00000490731 ZNF541Q9H0D2 1346 aa12.4□□□□□ -0.42
DEPDC5-218ENST00000490731 H7C1W4 665 aa12.4□□□□□ -0.42
DEPDC5-218ENST00000490731 FZD9O00144 591 aa12.4□□□□□ -0.42
DEPDC5-218ENST00000490731 ATP8B2P98198 1209 aa12.4□□□□□ -0.42
DEPDC5-218ENST00000490731 GPC2Q8N158 579 aa12.4□□□□□ -0.42
DEPDC5-218ENST00000490731 GCC1Q96CN9 775 aa12.4□□□□□ -0.42
DEPDC5-218ENST00000490731 CDHR2Q9BYE9 1310 aa12.39□□□□□ -0.43
DEPDC5-218ENST00000490731 AOC3Q16853 763 aa12.39□□□□□ -0.43
DEPDC5-218ENST00000490731 UBE3BQ7Z3V4 1068 aa12.39□□□□□ -0.43
DEPDC5-218ENST00000490731 SMC5Q8IY18 1101 aa12.39□□□□□ -0.43
DEPDC5-218ENST00000490731 JARID2Q92833 1246 aaPredicted RBP12.39□□□□□ -0.43
DEPDC5-218ENST00000490731 CELF1Q92879 486 aaKnown RBP12.39□□□□□ -0.43
DEPDC5-218ENST00000490731 SUCLG2Q96I99 432 aa12.39□□□□□ -0.43
DEPDC5-218ENST00000490731 L3MBTL3Q96JM7 780 aaPredicted RBP12.39□□□□□ -0.43
DEPDC5-218ENST00000490731 RTFDC1Q9BY42 306 aaPredicted RBP12.39□□□□□ -0.43
DEPDC5-218ENST00000490731 GJA3Q9Y6H8 435 aa12.39□□□□□ -0.43
DEPDC5-218ENST00000490731 SCN4AP35499 1836 aa12.39□□□□□ -0.43
DEPDC5-218ENST00000490731 POTECB2RU33 542 aa12.38□□□□□ -0.43
DEPDC5-218ENST00000490731 LMOD1P29536 600 aaPredicted RBP12.38□□□□□ -0.43
DEPDC5-218ENST00000490731 CASP7P55210 303 aa12.38□□□□□ -0.43
DEPDC5-218ENST00000490731 RPS8P62241 208 aaKnown RBP12.38□□□□□ -0.43
DEPDC5-218ENST00000490731 MTX1Q13505 466 aa12.38□□□□□ -0.43
DEPDC5-218ENST00000490731 HACL1Q9UJ83 578 aa12.38□□□□□ -0.43
DEPDC5-218ENST00000490731 NSFL1CQ9UNZ2 370 aaKnown RBP12.38□□□□□ -0.43
DEPDC5-218ENST00000490731 TAF1P21675 1872 aa12.38□□□□□ -0.43
DEPDC5-218ENST00000490731 LRRC37AA6NMS7 1700 aa12.37□□□□□ -0.43
DEPDC5-218ENST00000490731 C6orf229H3BNL8 230 aa12.37□□□□□ -0.43
DEPDC5-218ENST00000490731 SLC51AQ86UW1 340 aa12.37□□□□□ -0.43
DEPDC5-218ENST00000490731 ANKRD18AQ8IVF6 992 aa12.37□□□□□ -0.43
DEPDC5-218ENST00000490731 SSH3Q8TE77 659 aa12.37□□□□□ -0.43
DEPDC5-218ENST00000490731 KAZALD1Q96I82 304 aa12.37□□□□□ -0.43
DEPDC5-218ENST00000490731 CCDC85AQ96PX6 553 aaPredicted RBP12.37□□□□□ -0.43
DEPDC5-218ENST00000490731 EYA3Q99504 573 aa12.37□□□□□ -0.43
DEPDC5-218ENST00000490731 BICC1Q9H694 974 aaKnown RBP12.37□□□□□ -0.43
DEPDC5-218ENST00000490731 DCTPP1Q9H773 170 aa12.37□□□□□ -0.43
DEPDC5-218ENST00000490731 ZNRF3Q9ULT6 936 aa12.37□□□□□ -0.43
DEPDC5-218ENST00000490731 PNMA6EA0A0J9YXQ4 647 aa12.36□□□□□ -0.43
DEPDC5-218ENST00000490731 SRGAP3O43295 1099 aa12.36□□□□□ -0.43
DEPDC5-218ENST00000490731 CTSWP56202 376 aa12.36□□□□□ -0.43
DEPDC5-218ENST00000490731 KIAA2012Q0VF49 1180 aa12.36□□□□□ -0.43
DEPDC5-218ENST00000490731 POLA2Q14181 598 aa12.36□□□□□ -0.43
DEPDC5-218ENST00000490731 WASHC4Q2M389 1173 aa12.36□□□□□ -0.43
DEPDC5-218ENST00000490731 EAPPQ56P03 285 aaPredicted RBP12.36□□□□□ -0.43
DEPDC5-218ENST00000490731 CHADLQ6NUI6 762 aa12.36□□□□□ -0.43
DEPDC5-218ENST00000490731 PNMA8AQ86V59 439 aaPredicted RBP12.36□□□□□ -0.43
DEPDC5-218ENST00000490731 CDC5LQ99459 802 aaKnown RBP12.36□□□□□ -0.43
DEPDC5-218ENST00000490731 TAF1DQ9H5J8 278 aaPredicted RBP12.36□□□□□ -0.43
DEPDC5-218ENST00000490731 SEC31BQ9NQW1 1179 aa12.36□□□□□ -0.43
DEPDC5-218ENST00000490731 ANKIB1Q9P2G1 1089 aa12.36□□□□□ -0.43
DEPDC5-218ENST00000490731 CLEC11AQ9Y240 323 aa12.36□□□□□ -0.43
DEPDC5-218ENST00000490731 G3V3G9 751 aa12.35□□□□□ -0.43
DEPDC5-218ENST00000490731 EPHX2P34913 555 aa12.35□□□□□ -0.43
DEPDC5-218ENST00000490731 GPSM2P81274 684 aa12.35□□□□□ -0.43
DEPDC5-218ENST00000490731 TNIP1Q15025 636 aa12.35□□□□□ -0.43
DEPDC5-218ENST00000490731 RABL6Q3YEC7 729 aaPredicted RBP12.35□□□□□ -0.43
DEPDC5-218ENST00000490731 DCAF8Q5TAQ9 597 aa12.35□□□□□ -0.43
DEPDC5-218ENST00000490731 LDHDQ86WU2 507 aa12.35□□□□□ -0.43
DEPDC5-218ENST00000490731 COL4A5P29400 1685 aa12.35□□□□□ -0.43
DEPDC5-218ENST00000490731 MYH3P11055 1940 aa12.35□□□□□ -0.43
DEPDC5-218ENST00000490731 FOXO4P98177 505 aa12.34□□□□□ -0.43
DEPDC5-218ENST00000490731 NUCB1Q02818 461 aa12.34□□□□□ -0.43
DEPDC5-218ENST00000490731 TTLL11Q8NHH1 800 aa12.34□□□□□ -0.43
DEPDC5-218ENST00000490731 PLA2G12BQ9BX93 195 aa12.34□□□□□ -0.43
DEPDC5-218ENST00000490731 ZBTB47Q9UFB7 747 aaPredicted RBP12.34□□□□□ -0.43
DEPDC5-218ENST00000490731 GGA1Q9UJY5 639 aa12.34□□□□□ -0.43
DEPDC5-218ENST00000490731 RIMBP2O15034 1052 aa12.33□□□□□ -0.44
DEPDC5-218ENST00000490731 IGHMBP2P38935 993 aaKnown RBP12.33□□□□□ -0.44
DEPDC5-218ENST00000490731 HSP90AB4PQ58FF6 505 aa12.33□□□□□ -0.44
DEPDC5-218ENST00000490731 EPHA10Q5JZY3 1008 aa12.33□□□□□ -0.44
DEPDC5-218ENST00000490731 ANKRD45Q5TZF3 282 aa12.33□□□□□ -0.44
DEPDC5-218ENST00000490731 CIAPIN1Q6FI81 312 aa12.33□□□□□ -0.44
DEPDC5-218ENST00000490731 ZC3H12CQ9C0D7 883 aaKnown RBP12.33□□□□□ -0.44
DEPDC5-218ENST00000490731 GREM2Q9H772 168 aa12.33□□□□□ -0.44
DEPDC5-218ENST00000490731 DUOX1Q9NRD9 1551 aa12.33□□□□□ -0.44
DEPDC5-218ENST00000490731 RTL9Q8NET4 1388 aa12.32□□□□□ -0.44
DEPDC5-218ENST00000490731 RAB11FIP3O75154 756 aa12.32□□□□□ -0.44
DEPDC5-218ENST00000490731 RAD17O75943 681 aa12.32□□□□□ -0.44
DEPDC5-218ENST00000490731 UFL1O94874 794 aa12.32□□□□□ -0.44
DEPDC5-218ENST00000490731 CXCL9Q07325 125 aa12.32□□□□□ -0.44
DEPDC5-218ENST00000490731 LMBR1LQ6UX01 489 aa12.32□□□□□ -0.44
DEPDC5-218ENST00000490731 CHD1LQ86WJ1 897 aa12.32□□□□□ -0.44
DEPDC5-218ENST00000490731 TBC1D16Q8TBP0 767 aa12.32□□□□□ -0.44
DEPDC5-218ENST00000490731 PODXL2Q9NZ53 605 aa12.32□□□□□ -0.44
DEPDC5-218ENST00000490731 POLLQ9UGP5 575 aa12.32□□□□□ -0.44
DEPDC5-218ENST00000490731 XDHP47989 1333 aa12.32□□□□□ -0.44
DEPDC5-218ENST00000490731 SURF6O75683 361 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms