RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 GPR162Q16538 588 aa16.81■□□□□ 0.28
ARHGEF39-205ENST00000490638 RNF214Q8ND24 703 aa16.81■□□□□ 0.28
ARHGEF39-205ENST00000490638 ALKQ9UM73 1620 aa16.81■□□□□ 0.28
ARHGEF39-205ENST00000490638 OFD1O75665 1012 aa16.8■□□□□ 0.28
ARHGEF39-205ENST00000490638 HSPA1LP34931 641 aa16.8■□□□□ 0.28
ARHGEF39-205ENST00000490638 PDE6BP35913 854 aa16.8■□□□□ 0.28
ARHGEF39-205ENST00000490638 IARSP41252 1262 aaKnown RBP16.8■□□□□ 0.28
ARHGEF39-205ENST00000490638 WWC2Q6AWC2 1192 aa16.8■□□□□ 0.28
ARHGEF39-205ENST00000490638 CUL5Q93034 780 aa16.8■□□□□ 0.28
ARHGEF39-205ENST00000490638 SPATA32Q96LK8 384 aa16.8■□□□□ 0.28
ARHGEF39-205ENST00000490638 RBM8AQ9Y5S9 174 aaKnown RBP16.8■□□□□ 0.28
ARHGEF39-205ENST00000490638 PPFIA3O75145 1194 aa16.8■□□□□ 0.28
ARHGEF39-205ENST00000490638 RBM6P78332 1123 aaKnown RBP16.8■□□□□ 0.28
ARHGEF39-205ENST00000490638 HOMER1Q86YM7 354 aa16.8■□□□□ 0.28
ARHGEF39-205ENST00000490638 ADGRB3O60242 1522 aa16.8■□□□□ 0.28
ARHGEF39-205ENST00000490638 CYP27B1O15528 508 aa16.8■□□□□ 0.28
ARHGEF39-205ENST00000490638 NLRP5P59047 1200 aa16.8■□□□□ 0.28
ARHGEF39-205ENST00000490638 MPNDQ8N594 471 aa16.8■□□□□ 0.28
ARHGEF39-205ENST00000490638 WTAPQ15007 396 aa16.8■□□□□ 0.28
ARHGEF39-205ENST00000490638 BRF1Q92994 677 aa16.8■□□□□ 0.28
ARHGEF39-205ENST00000490638 PLEKHF1Q96S99 279 aa16.8■□□□□ 0.28
ARHGEF39-205ENST00000490638 CCDC194A0A1B0GVG4 234 aa16.79■□□□□ 0.28
ARHGEF39-205ENST00000490638 RNF113AO15541 343 aaKnown RBP16.79■□□□□ 0.28
ARHGEF39-205ENST00000490638 JCADQ9P266 1359 aa16.79■□□□□ 0.28
ARHGEF39-205ENST00000490638 MYCNP04198 464 aaPredicted RBP16.79■□□□□ 0.28
ARHGEF39-205ENST00000490638 EIF6P56537 245 aaKnown RBP16.79■□□□□ 0.28
ARHGEF39-205ENST00000490638 PNMA6EA0A0J9YXQ4 647 aa16.79■□□□□ 0.28
ARHGEF39-205ENST00000490638 TNNI3KQ59H18 835 aa16.79■□□□□ 0.28
ARHGEF39-205ENST00000490638 LRRC2Q9BYS8 371 aa16.79■□□□□ 0.28
ARHGEF39-205ENST00000490638 KRT23Q9C075 422 aa16.79■□□□□ 0.28
ARHGEF39-205ENST00000490638 FPGT-TNNI3KV9GXZ4 949 aa16.79■□□□□ 0.28
ARHGEF39-205ENST00000490638 NMIQ13287 307 aaPredicted RBP16.78■□□□□ 0.28
ARHGEF39-205ENST00000490638 GSE1Q14687 1217 aa16.78■□□□□ 0.28
ARHGEF39-205ENST00000490638 GIGYF2Q6Y7W6 1299 aaKnown RBP16.78■□□□□ 0.28
ARHGEF39-205ENST00000490638 LPIN2Q92539 896 aa16.78■□□□□ 0.28
ARHGEF39-205ENST00000490638 XAGE2Q96GT9 111 aa16.78■□□□□ 0.28
ARHGEF39-205ENST00000490638 MAP3K15Q6ZN16 1313 aa16.78■□□□□ 0.28
ARHGEF39-205ENST00000490638 SSRP1Q08945 709 aaKnown RBP16.78■□□□□ 0.28
ARHGEF39-205ENST00000490638 USP44Q9H0E7 712 aa16.78■□□□□ 0.28
ARHGEF39-205ENST00000490638 TRAK2O60296 914 aa16.78■□□□□ 0.28
ARHGEF39-205ENST00000490638 TNIP1Q15025 636 aa16.78■□□□□ 0.28
ARHGEF39-205ENST00000490638 PROSER3Q2NL68 480 aa16.78■□□□□ 0.28
ARHGEF39-205ENST00000490638 ESYT1Q9BSJ8 1104 aa16.78■□□□□ 0.28
ARHGEF39-205ENST00000490638 ORC3Q9UBD5 711 aaPredicted RBP16.78■□□□□ 0.28
ARHGEF39-205ENST00000490638 AGLP35573 1532 aa16.78■□□□□ 0.28
ARHGEF39-205ENST00000490638 METAP2P50579 478 aaKnown RBP eCLIP16.77■□□□□ 0.28
ARHGEF39-205ENST00000490638 TEX11Q8IYF3 940 aa16.77■□□□□ 0.28
ARHGEF39-205ENST00000490638 CNNM2Q9H8M5 875 aa16.77■□□□□ 0.28
ARHGEF39-205ENST00000490638 PPIP5K2O43314 1243 aa16.77■□□□□ 0.28
ARHGEF39-205ENST00000490638 GNAT2P19087 354 aa16.77■□□□□ 0.28
ARHGEF39-205ENST00000490638 C2CD5Q86YS7 1000 aa16.77■□□□□ 0.28
ARHGEF39-205ENST00000490638 ZBTB38Q8NAP3 1195 aaPredicted RBP16.77■□□□□ 0.27
ARHGEF39-205ENST00000490638 SUPT20HQ8NEM7 779 aa16.77■□□□□ 0.27
ARHGEF39-205ENST00000490638 WDR66Q8TBY9 1149 aa16.77■□□□□ 0.27
ARHGEF39-205ENST00000490638 GJD4Q96KN9 370 aaPredicted RBP16.77■□□□□ 0.27
ARHGEF39-205ENST00000490638 KLF18A0A0U1RQI7 1052 aa16.76■□□□□ 0.27
ARHGEF39-205ENST00000490638 DIP2BQ9P265 1576 aa16.76■□□□□ 0.27
ARHGEF39-205ENST00000490638 CTSWP56202 376 aa16.76■□□□□ 0.27
ARHGEF39-205ENST00000490638 TMTC2Q8N394 836 aa16.76■□□□□ 0.27
ARHGEF39-205ENST00000490638 TNS3Q68CZ2 1445 aa16.76■□□□□ 0.27
ARHGEF39-205ENST00000490638 PRAMEF22A3QJZ6 481 aa16.76■□□□□ 0.27
ARHGEF39-205ENST00000490638 TNNI2P48788 182 aa16.76■□□□□ 0.27
ARHGEF39-205ENST00000490638 IFIT1BQ5T764 474 aaKnown RBP16.76■□□□□ 0.27
ARHGEF39-205ENST00000490638 TTC6Q86TZ1 520 aa16.76■□□□□ 0.27
ARHGEF39-205ENST00000490638 CIZ1Q9ULV3 898 aaPredicted RBP16.76■□□□□ 0.27
ARHGEF39-205ENST00000490638 C1orf167Q5SNV9 1468 aa16.75■□□□□ 0.27
ARHGEF39-205ENST00000490638 UNC13BO14795 1591 aa16.75■□□□□ 0.27
ARHGEF39-205ENST00000490638 PCCAP05165 728 aaPredicted RBP16.75■□□□□ 0.27
ARHGEF39-205ENST00000490638 NIM1KQ8IY84 436 aa16.75■□□□□ 0.27
ARHGEF39-205ENST00000490638 CEP131Q9UPN4 1083 aa16.75■□□□□ 0.27
ARHGEF39-205ENST00000490638 MBD4O95243 580 aa16.75■□□□□ 0.27
ARHGEF39-205ENST00000490638 PLEKHM2Q8IWE5 1019 aa16.75■□□□□ 0.27
ARHGEF39-205ENST00000490638 CCDC12Q8WUD4 166 aaPredicted RBP16.75■□□□□ 0.27
ARHGEF39-205ENST00000490638 CNKSR1Q969H4 720 aa16.75■□□□□ 0.27
ARHGEF39-205ENST00000490638 ZBTB43O43298 467 aa16.75■□□□□ 0.27
ARHGEF39-205ENST00000490638 STIM1Q13586 685 aa16.74■□□□□ 0.27
ARHGEF39-205ENST00000490638 PPP4R3BQ5MIZ7 849 aa16.74■□□□□ 0.27
ARHGEF39-205ENST00000490638 SLC26A6Q9BXS9 759 aa16.74■□□□□ 0.27
ARHGEF39-205ENST00000490638 CCDC178Q5BJE1 867 aa16.74■□□□□ 0.27
ARHGEF39-205ENST00000490638 CLTCQ00610 1675 aaKnown RBP16.74■□□□□ 0.27
ARHGEF39-205ENST00000490638 SERPINB2P05120 415 aa16.74■□□□□ 0.27
ARHGEF39-205ENST00000490638 PALLDQ8WX93 1383 aa16.73■□□□□ 0.27
ARHGEF39-205ENST00000490638 DHX8Q14562 1220 aaKnown RBP16.73■□□□□ 0.27
ARHGEF39-205ENST00000490638 TNMDQ9H2S6 317 aa16.73■□□□□ 0.27
ARHGEF39-205ENST00000490638 IBSPP21815 317 aaPredicted RBP16.73■□□□□ 0.27
ARHGEF39-205ENST00000490638 BRPF1P55201 1214 aaPredicted RBP16.73■□□□□ 0.27
ARHGEF39-205ENST00000490638 MAGEC2Q9UBF1 373 aaPredicted RBP16.73■□□□□ 0.27
ARHGEF39-205ENST00000490638 MROH5Q6ZUA9 1318 aa16.73■□□□□ 0.27
ARHGEF39-205ENST00000490638 LMTK2Q8IWU2 1503 aa16.73■□□□□ 0.27
ARHGEF39-205ENST00000490638 TRMT1LQ7Z2T5 733 aaKnown RBP16.73■□□□□ 0.27
ARHGEF39-205ENST00000490638 ZNF408Q9H9D4 720 aa16.73■□□□□ 0.27
ARHGEF39-205ENST00000490638 ATF5Q9Y2D1 282 aaPredicted RBP16.73■□□□□ 0.27
ARHGEF39-205ENST00000490638 CEP152O94986 1710 aa16.73■□□□□ 0.27
ARHGEF39-205ENST00000490638 BEND3Q5T5X7 828 aa16.72■□□□□ 0.27
ARHGEF39-205ENST00000490638 OTUD7AQ8TE49 926 aaPredicted RBP16.72■□□□□ 0.27
ARHGEF39-205ENST00000490638 BLMP54132 1417 aaPredicted RBP16.72■□□□□ 0.27
ARHGEF39-205ENST00000490638 GTF2IP78347 998 aa16.72■□□□□ 0.27
ARHGEF39-205ENST00000490638 RAB34Q9BZG1 259 aa16.72■□□□□ 0.27
ARHGEF39-205ENST00000490638 GNAQP50148 359 aa16.72■□□□□ 0.27
ARHGEF39-205ENST00000490638 ARHGAP27Q6ZUM4 889 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 1085.7 ms