RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 ANKRD2Q9GZV1 360 aa16.33■□□□□ 0.2
SNX12-205ENST00000490561 AKAP2Q9Y2D5 859 aa16.33■□□□□ 0.2
SNX12-205ENST00000490561 COL11A2P13942 1736 aaPredicted RBP16.32■□□□□ 0.2
SNX12-205ENST00000490561 LRRC24Q50LG9 513 aa16.32■□□□□ 0.2
SNX12-205ENST00000490561 PPEF1O14829 653 aaPredicted RBP16.31■□□□□ 0.2
SNX12-205ENST00000490561 SASH1O94885 1247 aa16.31■□□□□ 0.2
SNX12-205ENST00000490561 GRIPAP1Q4V328 841 aa16.31■□□□□ 0.2
SNX12-205ENST00000490561 PUS3Q9BZE2 481 aaKnown RBP16.31■□□□□ 0.2
SNX12-205ENST00000490561 DLEC1Q9Y238 1755 aa16.31■□□□□ 0.2
SNX12-205ENST00000490561 APBB1O00213 710 aa16.3■□□□□ 0.2
SNX12-205ENST00000490561 TFCP2Q12800 502 aa16.3■□□□□ 0.2
SNX12-205ENST00000490561 CC2D2BQ6DHV5 1058 aa16.3■□□□□ 0.2
SNX12-205ENST00000490561 SP8Q8IXZ3 490 aa16.3■□□□□ 0.2
SNX12-205ENST00000490561 MINPP1Q9UNW1 487 aa16.3■□□□□ 0.2
SNX12-205ENST00000490561 PDE8BO95263 885 aa16.29■□□□□ 0.2
SNX12-205ENST00000490561 DPEP1P16444 411 aa16.29■□□□□ 0.2
SNX12-205ENST00000490561 CHRNA5P30532 468 aa16.29■□□□□ 0.2
SNX12-205ENST00000490561 CHRNDQ07001 517 aa16.29■□□□□ 0.2
SNX12-205ENST00000490561 PUM3Q15397 648 aaKnown RBP16.29■□□□□ 0.2
SNX12-205ENST00000490561 TTLL6Q8N841 843 aa16.29■□□□□ 0.2
SNX12-205ENST00000490561 PIM2Q9P1W9 311 aa16.29■□□□□ 0.2
SNX12-205ENST00000490561 PPP1R1BQ9UD71 204 aaPredicted RBP16.29■□□□□ 0.2
SNX12-205ENST00000490561 ATP6V0A2Q9Y487 856 aa16.29■□□□□ 0.2
SNX12-205ENST00000490561 IFIT2P09913 472 aaKnown RBP16.28■□□□□ 0.2
SNX12-205ENST00000490561 TNNI3KQ59H18 835 aa16.28■□□□□ 0.2
SNX12-205ENST00000490561 SOGA3Q5TF21 947 aa16.28■□□□□ 0.2
SNX12-205ENST00000490561 PRPF40BQ6NWY9 871 aaKnown RBP16.28■□□□□ 0.2
SNX12-205ENST00000490561 VGLL2Q8N8G2 317 aa16.28■□□□□ 0.2
SNX12-205ENST00000490561 GPATCH3Q96I76 525 aa16.28■□□□□ 0.2
SNX12-205ENST00000490561 LNPKQ9C0E8 428 aa16.28■□□□□ 0.2
SNX12-205ENST00000490561 FPGT-TNNI3KV9GXZ4 949 aa16.28■□□□□ 0.2
SNX12-205ENST00000490561 XDHP47989 1333 aa16.27■□□□□ 0.2
SNX12-205ENST00000490561 UBE4AQ14139 1066 aa16.27■□□□□ 0.2
SNX12-205ENST00000490561 ATP2B3Q16720 1220 aa16.27■□□□□ 0.2
SNX12-205ENST00000490561 KLHL34Q8N239 644 aa16.27■□□□□ 0.2
SNX12-205ENST00000490561 LPIN2Q92539 896 aa16.27■□□□□ 0.2
SNX12-205ENST00000490561 IL1RAPL2Q9NP60 686 aa16.27■□□□□ 0.2
SNX12-205ENST00000490561 LEMD3Q9Y2U8 911 aa16.27■□□□□ 0.2
SNX12-205ENST00000490561 LRRC37AA6NMS7 1700 aa16.27■□□□□ 0.19
SNX12-205ENST00000490561 ZNF609O15014 1411 aa16.27■□□□□ 0.19
SNX12-205ENST00000490561 SPEF2Q9C093 1822 aa16.26■□□□□ 0.19
SNX12-205ENST00000490561 KIAA1551Q9HCM1 1747 aa16.26■□□□□ 0.19
SNX12-205ENST00000490561 A0A0G2JLW4 131 aa16.26■□□□□ 0.19
SNX12-205ENST00000490561 SMARCA5O60264 1052 aaPredicted RBP16.26■□□□□ 0.19
SNX12-205ENST00000490561 IFIT1P09914 478 aaKnown RBP16.26■□□□□ 0.19
SNX12-205ENST00000490561 SLC5A1P13866 664 aa16.26■□□□□ 0.19
SNX12-205ENST00000490561 KCNJ4P48050 445 aa16.26■□□□□ 0.19
SNX12-205ENST00000490561 DALRD3Q5D0E6 543 aaKnown RBP16.26■□□□□ 0.19
SNX12-205ENST00000490561 AACSQ86V21 672 aa16.26■□□□□ 0.19
SNX12-205ENST00000490561 PODXL2Q9NZ53 605 aa16.26■□□□□ 0.19
SNX12-205ENST00000490561 ANKIB1Q9P2G1 1089 aa16.26■□□□□ 0.19
SNX12-205ENST00000490561 COL4A1P02462 1669 aa16.25■□□□□ 0.19
SNX12-205ENST00000490561 KCNA3P22001 575 aa16.25■□□□□ 0.19
SNX12-205ENST00000490561 ATP2B4P23634 1241 aa16.25■□□□□ 0.19
SNX12-205ENST00000490561 AOX1Q06278 1338 aa16.24■□□□□ 0.19
SNX12-205ENST00000490561 A0A1B0GUL7 405 aa16.24■□□□□ 0.19
SNX12-205ENST00000490561 FGFR2P21802 821 aa16.24■□□□□ 0.19
SNX12-205ENST00000490561 EAF2Q96CJ1 260 aaPredicted RBP16.24■□□□□ 0.19
SNX12-205ENST00000490561 GGA1Q9UJY5 639 aa16.24■□□□□ 0.19
SNX12-205ENST00000490561 TTC41PQ6P2S7 1318 aa16.23■□□□□ 0.19
SNX12-205ENST00000490561 TAF1P21675 1872 aa16.23■□□□□ 0.19
SNX12-205ENST00000490561 MX1P20591 662 aa16.23■□□□□ 0.19
SNX12-205ENST00000490561 GORABQ5T7V8 394 aa16.23■□□□□ 0.19
SNX12-205ENST00000490561 RTKN2Q8IZC4 609 aa16.23■□□□□ 0.19
SNX12-205ENST00000490561 MPNDQ8N594 471 aa16.23■□□□□ 0.19
SNX12-205ENST00000490561 HELBQ8NG08 1087 aaPredicted RBP16.23■□□□□ 0.19
SNX12-205ENST00000490561 NEUROD6Q96NK8 337 aa16.23■□□□□ 0.19
SNX12-205ENST00000490561 ZNF804BA4D1E1 1349 aa16.22■□□□□ 0.19
SNX12-205ENST00000490561 ERC2O15083 957 aa16.22■□□□□ 0.19
SNX12-205ENST00000490561 TAF5LO75529 589 aa16.22■□□□□ 0.19
SNX12-205ENST00000490561 GPSM2P81274 684 aa16.22■□□□□ 0.19
SNX12-205ENST00000490561 CCDC93Q567U6 631 aa16.22■□□□□ 0.19
SNX12-205ENST00000490561 CCDC158Q5M9N0 1113 aa16.22■□□□□ 0.19
SNX12-205ENST00000490561 DPP8Q6V1X1 898 aaPredicted RBP16.22■□□□□ 0.19
SNX12-205ENST00000490561 C15orf52Q6ZUT6 534 aaKnown RBP16.22■□□□□ 0.19
SNX12-205ENST00000490561 SUPT20HQ8NEM7 779 aa16.22■□□□□ 0.19
SNX12-205ENST00000490561 C7orf43Q8WVR3 580 aa16.22■□□□□ 0.19
SNX12-205ENST00000490561 FHDC1Q9C0D6 1143 aaPredicted RBP16.22■□□□□ 0.19
SNX12-205ENST00000490561 OSBPL3Q9H4L5 887 aa16.22■□□□□ 0.19
SNX12-205ENST00000490561 STAP2Q9UGK3 403 aa16.22■□□□□ 0.19
SNX12-205ENST00000490561 NSFL1CQ9UNZ2 370 aaKnown RBP16.22■□□□□ 0.19
SNX12-205ENST00000490561 SALL3Q9BXA9 1300 aa16.21■□□□□ 0.19
SNX12-205ENST00000490561 A0A1B0GUL6 1792 aa16.21■□□□□ 0.19
SNX12-205ENST00000490561 PDE4AP27815 886 aa16.21■□□□□ 0.19
SNX12-205ENST00000490561 PLEKHM2Q8IWE5 1019 aa16.21■□□□□ 0.19
SNX12-205ENST00000490561 XAGE2Q96GT9 111 aa16.21■□□□□ 0.19
SNX12-205ENST00000490561 EYA3Q99504 573 aa16.21■□□□□ 0.19
SNX12-205ENST00000490561 CCDC8Q9H0W5 538 aaPredicted RBP16.21■□□□□ 0.19
SNX12-205ENST00000490561 ECHDC1Q9NTX5 307 aa16.21■□□□□ 0.19
SNX12-205ENST00000490561 ARAP2Q8WZ64 1704 aa16.2■□□□□ 0.18
SNX12-205ENST00000490561 SLX4Q8IY92 1834 aa16.2■□□□□ 0.18
SNX12-205ENST00000490561 ZBTB22O15209 634 aa16.2■□□□□ 0.18
SNX12-205ENST00000490561 UFL1O94874 794 aa16.2■□□□□ 0.18
SNX12-205ENST00000490561 PDE1AP54750 535 aa16.2■□□□□ 0.18
SNX12-205ENST00000490561 TIMM10P62072 90 aa16.2■□□□□ 0.18
SNX12-205ENST00000490561 CAVIN4Q5BKX8 364 aa16.2■□□□□ 0.18
SNX12-205ENST00000490561 C16orf71Q8IYS4 520 aaPredicted RBP16.2■□□□□ 0.18
SNX12-205ENST00000490561 TBC1D16Q8TBP0 767 aa16.2■□□□□ 0.18
SNX12-205ENST00000490561 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.2■□□□□ 0.18
SNX12-205ENST00000490561 BCL11AQ9H165 835 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms