RNA–Protein interactions for RNA: ENST00000490458.1

SNAP29-203, Transcript of synaptosome associated protein 29, humanhuman

TSL 2

Gene SNAP29, Length 972 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP29-203ENST00000490458 C2orf69Q8N8R5 385 aa21.3■■□□□ 1
SNAP29-203ENST00000490458 DCPSQ96C86 337 aaKnown RBP21.3■■□□□ 1
SNAP29-203ENST00000490458 EYA3Q99504 573 aa21.3■■□□□ 1
SNAP29-203ENST00000490458 ZEB1P37275 1124 aaPredicted RBP21.29■■□□□ 1
SNAP29-203ENST00000490458 TBC1D16Q8TBP0 767 aa21.29■■□□□ 1
SNAP29-203ENST00000490458 TRIM35Q9UPQ4 493 aa21.29■■□□□ 1
SNAP29-203ENST00000490458 IRS4O14654 1257 aaPredicted RBP21.28■■□□□ 1
SNAP29-203ENST00000490458 HOXB7P09629 217 aa21.28■■□□□ 1
SNAP29-203ENST00000490458 KIF23Q02241 960 aaPredicted RBP21.28■■□□□ 1
SNAP29-203ENST00000490458 GGA3Q9NZ52 723 aa21.28■■□□□ 1
SNAP29-203ENST00000490458 DBF4Q9UBU7 674 aaPredicted RBP21.28■■□□□ 1
SNAP29-203ENST00000490458 ZNF157P51786 506 aaPredicted RBP21.27■■□□□ 1
SNAP29-203ENST00000490458 RALBP1Q15311 655 aa21.27■■□□□ 1
SNAP29-203ENST00000490458 CCDC102AQ96A19 550 aa21.27■■□□□ 1
SNAP29-203ENST00000490458 SAGE1Q9NXZ1 904 aa21.27■■□□□ 1
SNAP29-203ENST00000490458 ASTN2O75129 1339 aaPredicted RBP21.27■□□□□ 0.99
SNAP29-203ENST00000490458 RPS8P62241 208 aaKnown RBP21.26■□□□□ 0.99
SNAP29-203ENST00000490458 SLC10A3P09131 477 aa21.25■□□□□ 0.99
SNAP29-203ENST00000490458 VIL1P09327 827 aaKnown RBP21.25■□□□□ 0.99
SNAP29-203ENST00000490458 SULF1Q8IWU6 871 aa21.25■□□□□ 0.99
SNAP29-203ENST00000490458 ZC3H12CQ9C0D7 883 aaKnown RBP21.25■□□□□ 0.99
SNAP29-203ENST00000490458 RNF186Q9NXI6 227 aa21.25■□□□□ 0.99
SNAP29-203ENST00000490458 ZNF609O15014 1411 aa21.24■□□□□ 0.99
SNAP29-203ENST00000490458 TRIM28Q13263 835 aaKnown RBP21.24■□□□□ 0.99
SNAP29-203ENST00000490458 DUSP27Q5VZP5 1158 aa21.24■□□□□ 0.99
SNAP29-203ENST00000490458 RUNDC1Q96C34 613 aa21.24■□□□□ 0.99
SNAP29-203ENST00000490458 CDCA5Q96FF9 252 aa21.24■□□□□ 0.99
SNAP29-203ENST00000490458 SEC31BQ9NQW1 1179 aa21.24■□□□□ 0.99
SNAP29-203ENST00000490458 HYPKQ9NX55 129 aa21.24■□□□□ 0.99
SNAP29-203ENST00000490458 PODXL2Q9NZ53 605 aa21.24■□□□□ 0.99
SNAP29-203ENST00000490458 PAPPA2Q9BXP8 1791 aa21.23■□□□□ 0.99
SNAP29-203ENST00000490458 TRPA1O75762 1119 aa21.23■□□□□ 0.99
SNAP29-203ENST00000490458 UFL1O94874 794 aa21.23■□□□□ 0.99
SNAP29-203ENST00000490458 ZBTB38Q8NAP3 1195 aaPredicted RBP21.22■□□□□ 0.99
SNAP29-203ENST00000490458 SPEF2Q9C093 1822 aa21.21■□□□□ 0.99
SNAP29-203ENST00000490458 G3V3G9 751 aa21.21■□□□□ 0.99
SNAP29-203ENST00000490458 DCAF8Q5TAQ9 597 aa21.21■□□□□ 0.99
SNAP29-203ENST00000490458 RIC3Q7Z5B4 369 aa21.21■□□□□ 0.99
SNAP29-203ENST00000490458 CSRNP1Q96S65 589 aa21.21■□□□□ 0.99
SNAP29-203ENST00000490458 ANKIB1Q9P2G1 1089 aa21.21■□□□□ 0.99
SNAP29-203ENST00000490458 GGA1Q9UJY5 639 aa21.21■□□□□ 0.99
SNAP29-203ENST00000490458 MYBBP1AQ9BQG0 1328 aaKnown RBP21.21■□□□□ 0.99
SNAP29-203ENST00000490458 SOX10P56693 466 aa21.2■□□□□ 0.98
SNAP29-203ENST00000490458 ZNF280AP59817 542 aaPredicted RBP21.2■□□□□ 0.98
SNAP29-203ENST00000490458 GOLGA2Q08379 1002 aa21.2■□□□□ 0.98
SNAP29-203ENST00000490458 ANGEL2Q5VTE6 544 aaKnown RBP21.2■□□□□ 0.98
SNAP29-203ENST00000490458 RSBN1LQ6PCB5 846 aaPredicted RBP21.2■□□□□ 0.98
SNAP29-203ENST00000490458 RASAL3Q86YV0 1011 aa21.2■□□□□ 0.98
SNAP29-203ENST00000490458 MBIPQ9NS73 344 aa21.2■□□□□ 0.98
SNAP29-203ENST00000490458 ZNF646O15015 1829 aaPredicted RBP21.2■□□□□ 0.98
SNAP29-203ENST00000490458 AGBL3Q8NEM8 1001 aa21.19■□□□□ 0.98
SNAP29-203ENST00000490458 PHAXQ9H814 394 aaKnown RBP21.19■□□□□ 0.98
SNAP29-203ENST00000490458 MYH3P11055 1940 aa21.18■□□□□ 0.98
SNAP29-203ENST00000490458 SCARF1Q14162 830 aa21.18■□□□□ 0.98
SNAP29-203ENST00000490458 WDR43Q15061 677 aaKnown RBP eCLIP21.18■□□□□ 0.98
SNAP29-203ENST00000490458 CCDC85AQ96PX6 553 aaPredicted RBP21.18■□□□□ 0.98
SNAP29-203ENST00000490458 MYD88Q99836 296 aa21.18■□□□□ 0.98
SNAP29-203ENST00000490458 PDE4DIPQ5VU43 2346 aa21.17■□□□□ 0.98
SNAP29-203ENST00000490458 CCDC152Q4G0S7 254 aa21.17■□□□□ 0.98
SNAP29-203ENST00000490458 PDE8AO60658 829 aa21.16■□□□□ 0.98
SNAP29-203ENST00000490458 PCCAP05165 728 aaPredicted RBP21.16■□□□□ 0.98
SNAP29-203ENST00000490458 HSP90B1P14625 803 aaKnown RBP21.16■□□□□ 0.98
SNAP29-203ENST00000490458 CTU1Q7Z7A3 348 aaKnown RBP21.16■□□□□ 0.98
SNAP29-203ENST00000490458 JARID2Q92833 1246 aaPredicted RBP21.16■□□□□ 0.98
SNAP29-203ENST00000490458 GMLQ99445 158 aa21.16■□□□□ 0.98
SNAP29-203ENST00000490458 XDHP47989 1333 aa21.15■□□□□ 0.98
SNAP29-203ENST00000490458 PITPNM2Q9BZ72 1349 aa21.15■□□□□ 0.98
SNAP29-203ENST00000490458 FKBP1BP68106 108 aa21.15■□□□□ 0.98
SNAP29-203ENST00000490458 CCDC191Q8NCU4 936 aa21.15■□□□□ 0.98
SNAP29-203ENST00000490458 MYOZ2Q9NPC6 264 aa21.15■□□□□ 0.98
SNAP29-203ENST00000490458 ADAMTS8Q9UP79 889 aa21.15■□□□□ 0.98
SNAP29-203ENST00000490458 SCAF8Q9UPN6 1271 aaKnown RBP21.15■□□□□ 0.98
SNAP29-203ENST00000490458 TNRC18O15417 2968 aaPredicted RBP21.14■□□□□ 0.97
SNAP29-203ENST00000490458 USP17L8P0C7I0 530 aa21.14■□□□□ 0.97
SNAP29-203ENST00000490458 ZNF853P0CG23 659 aa21.14■□□□□ 0.97
SNAP29-203ENST00000490458 MOB2Q70IA6 237 aa21.14■□□□□ 0.97
SNAP29-203ENST00000490458 ANKRD18AQ8IVF6 992 aa21.14■□□□□ 0.97
SNAP29-203ENST00000490458 REM2Q8IYK8 340 aaPredicted RBP21.14■□□□□ 0.97
SNAP29-203ENST00000490458 USP17L3A6NCW0 530 aa21.13■□□□□ 0.97
SNAP29-203ENST00000490458 USP17L4A6NCW7 530 aa21.13■□□□□ 0.97
SNAP29-203ENST00000490458 ATP2B4P23634 1241 aa21.13■□□□□ 0.97
SNAP29-203ENST00000490458 USP17L1Q7RTZ2 530 aa21.13■□□□□ 0.97
SNAP29-203ENST00000490458 CWC25Q9NXE8 425 aaPredicted RBP21.13■□□□□ 0.97
SNAP29-203ENST00000490458 ELL2O00472 640 aaPredicted RBP21.12■□□□□ 0.97
SNAP29-203ENST00000490458 PODNQ7Z5L7 613 aa21.11■□□□□ 0.97
SNAP29-203ENST00000490458 METTL22Q9BUU2 404 aaPredicted RBP21.11■□□□□ 0.97
SNAP29-203ENST00000490458 MED23Q9ULK4 1368 aa21.1■□□□□ 0.97
SNAP29-203ENST00000490458 PRAMEF18Q5VWM3 479 aa21.1■□□□□ 0.97
SNAP29-203ENST00000490458 IFT57Q9NWB7 429 aa21.1■□□□□ 0.97
SNAP29-203ENST00000490458 PCDH10Q9P2E7 1040 aa21.1■□□□□ 0.97
SNAP29-203ENST00000490458 WTIPA6NIX2 430 aaPredicted RBP21.09■□□□□ 0.97
SNAP29-203ENST00000490458 UBE2Q2LH0YL09 131 aa21.09■□□□□ 0.97
SNAP29-203ENST00000490458 CTSWP56202 376 aa21.09■□□□□ 0.97
SNAP29-203ENST00000490458 DDX10Q13206 875 aaKnown RBP21.09■□□□□ 0.97
SNAP29-203ENST00000490458 NBPF9Q3BBW0 867 aa21.09■□□□□ 0.97
SNAP29-203ENST00000490458 CDC5LQ99459 802 aaKnown RBP21.09■□□□□ 0.97
SNAP29-203ENST00000490458 MXD3Q9BW11 206 aa21.09■□□□□ 0.97
SNAP29-203ENST00000490458 HPS5Q9UPZ3 1129 aa21.09■□□□□ 0.97
SNAP29-203ENST00000490458 GNAI1P63096 354 aa21.08■□□□□ 0.97
SNAP29-203ENST00000490458 TBC1D8O95759 1140 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms