RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 UBTFL1P0CB47 393 aaPredicted RBP21.41■■□□□ 1.02
RAPGEF3-212ENST00000490387 CTSWP56202 376 aa21.41■■□□□ 1.02
RAPGEF3-212ENST00000490387 SP8Q8IXZ3 490 aa21.41■■□□□ 1.02
RAPGEF3-212ENST00000490387 DNAJC5GQ8N7S2 189 aa21.41■■□□□ 1.02
RAPGEF3-212ENST00000490387 TAF1DQ9H5J8 278 aaPredicted RBP21.41■■□□□ 1.02
RAPGEF3-212ENST00000490387 COL4A1P02462 1669 aa21.4■■□□□ 1.02
RAPGEF3-212ENST00000490387 RTL9Q8NET4 1388 aa21.4■■□□□ 1.02
RAPGEF3-212ENST00000490387 CSF1RP07333 972 aa21.4■■□□□ 1.02
RAPGEF3-212ENST00000490387 POTEIP0CG38 1075 aa21.4■■□□□ 1.02
RAPGEF3-212ENST00000490387 POTEJP0CG39 1038 aa21.4■■□□□ 1.02
RAPGEF3-212ENST00000490387 RABL6Q3YEC7 729 aaPredicted RBP21.4■■□□□ 1.02
RAPGEF3-212ENST00000490387 CHADLQ6NUI6 762 aa21.4■■□□□ 1.02
RAPGEF3-212ENST00000490387 DPP8Q6V1X1 898 aaPredicted RBP21.4■■□□□ 1.02
RAPGEF3-212ENST00000490387 NIM1KQ8IY84 436 aa21.4■■□□□ 1.02
RAPGEF3-212ENST00000490387 GPC2Q8N158 579 aa21.4■■□□□ 1.02
RAPGEF3-212ENST00000490387 ANKRD44Q8N8A2 993 aa21.4■■□□□ 1.02
RAPGEF3-212ENST00000490387 SUPT20HQ8NEM7 779 aa21.4■■□□□ 1.02
RAPGEF3-212ENST00000490387 TTLL11Q8NHH1 800 aa21.4■■□□□ 1.02
RAPGEF3-212ENST00000490387 HACL1Q9UJ83 578 aa21.4■■□□□ 1.02
RAPGEF3-212ENST00000490387 AOC3Q16853 763 aa21.39■■□□□ 1.01
RAPGEF3-212ENST00000490387 MPNDQ8N594 471 aa21.39■■□□□ 1.01
RAPGEF3-212ENST00000490387 BICC1Q9H694 974 aaKnown RBP21.39■■□□□ 1.01
RAPGEF3-212ENST00000490387 ZBTB40Q9NUA8 1239 aa21.39■■□□□ 1.01
RAPGEF3-212ENST00000490387 LRRFIP2Q9Y608 721 aaKnown RBP21.39■■□□□ 1.01
RAPGEF3-212ENST00000490387 GJA3Q9Y6H8 435 aa21.39■■□□□ 1.01
RAPGEF3-212ENST00000490387 EAPPQ56P03 285 aaPredicted RBP21.38■■□□□ 1.01
RAPGEF3-212ENST00000490387 TMC4Q7Z404 712 aa21.38■■□□□ 1.01
RAPGEF3-212ENST00000490387 LDHDQ86WU2 507 aa21.38■■□□□ 1.01
RAPGEF3-212ENST00000490387 VPS33BQ9H267 617 aa21.38■■□□□ 1.01
RAPGEF3-212ENST00000490387 LRRC37AA6NMS7 1700 aa21.38■■□□□ 1.01
RAPGEF3-212ENST00000490387 EPHX2P34913 555 aa21.37■■□□□ 1.01
RAPGEF3-212ENST00000490387 KLRG1Q96E93 195 aa21.37■■□□□ 1.01
RAPGEF3-212ENST00000490387 CRBNQ96SW2 442 aa21.37■■□□□ 1.01
RAPGEF3-212ENST00000490387 RTFDC1Q9BY42 306 aaPredicted RBP21.37■■□□□ 1.01
RAPGEF3-212ENST00000490387 HDAC5Q9UQL6 1122 aa21.37■■□□□ 1.01
RAPGEF3-212ENST00000490387 GNAI2P04899 355 aa21.36■■□□□ 1.01
RAPGEF3-212ENST00000490387 CCDC152Q4G0S7 254 aa21.36■■□□□ 1.01
RAPGEF3-212ENST00000490387 LMBR1LQ6UX01 489 aa21.36■■□□□ 1.01
RAPGEF3-212ENST00000490387 GREM2Q9H772 168 aa21.36■■□□□ 1.01
RAPGEF3-212ENST00000490387 LMOD1P29536 600 aaPredicted RBP21.35■■□□□ 1.01
RAPGEF3-212ENST00000490387 CELF1Q92879 486 aaKnown RBP21.35■■□□□ 1.01
RAPGEF3-212ENST00000490387 CHMP4BQ9H444 224 aaKnown RBP21.35■■□□□ 1.01
RAPGEF3-212ENST00000490387 CLEC11AQ9Y240 323 aa21.35■■□□□ 1.01
RAPGEF3-212ENST00000490387 MTX1Q13505 466 aa21.34■■□□□ 1.01
RAPGEF3-212ENST00000490387 FAM161AQ3B820 660 aa21.34■■□□□ 1.01
RAPGEF3-212ENST00000490387 PNMA8AQ86V59 439 aaPredicted RBP21.34■■□□□ 1.01
RAPGEF3-212ENST00000490387 ADAMTSL1Q8N6G6 1762 aa21.33■■□□□ 1.01
RAPGEF3-212ENST00000490387 CCDC85AQ96PX6 553 aaPredicted RBP21.33■■□□□ 1.01
RAPGEF3-212ENST00000490387 C1orf115Q9H7X2 142 aa21.33■■□□□ 1.01
RAPGEF3-212ENST00000490387 SEC31BQ9NQW1 1179 aa21.33■■□□□ 1.01
RAPGEF3-212ENST00000490387 LTBP1Q14766 1721 aa21.32■■□□□ 1
RAPGEF3-212ENST00000490387 DUOX1Q9NRD9 1551 aa21.32■■□□□ 1
RAPGEF3-212ENST00000490387 SPEF2Q9C093 1822 aa21.32■■□□□ 1
RAPGEF3-212ENST00000490387 KIAA2012Q0VF49 1180 aa21.32■■□□□ 1
RAPGEF3-212ENST00000490387 ZNRF3Q9ULT6 936 aa21.32■■□□□ 1
RAPGEF3-212ENST00000490387 ITGA6P23229 1130 aa21.31■■□□□ 1
RAPGEF3-212ENST00000490387 RFX5P48382 616 aaPredicted RBP21.3■■□□□ 1
RAPGEF3-212ENST00000490387 SCNN1DP51172 638 aa21.3■■□□□ 1
RAPGEF3-212ENST00000490387 NSFL1CQ9UNZ2 370 aaKnown RBP21.3■■□□□ 1
RAPGEF3-212ENST00000490387 RPS8P62241 208 aaKnown RBP21.29■■□□□ 1
RAPGEF3-212ENST00000490387 IRX6P78412 446 aaPredicted RBP21.29■■□□□ 1
RAPGEF3-212ENST00000490387 CEP85Q6P2H3 762 aa21.29■■□□□ 1
RAPGEF3-212ENST00000490387 EXOC6Q8TAG9 804 aa21.29■■□□□ 1
RAPGEF3-212ENST00000490387 CREBZFQ9NS37 354 aa21.29■■□□□ 1
RAPGEF3-212ENST00000490387 EPS15P42566 896 aa21.28■■□□□ 1
RAPGEF3-212ENST00000490387 CXCL9Q07325 125 aa21.28■■□□□ 1
RAPGEF3-212ENST00000490387 IFIT5Q13325 482 aaKnown RBP21.28■■□□□ 1
RAPGEF3-212ENST00000490387 JMYQ8N9B5 988 aa21.28■■□□□ 1
RAPGEF3-212ENST00000490387 CDC5LQ99459 802 aaKnown RBP21.28■■□□□ 1
RAPGEF3-212ENST00000490387 CHMP3Q9Y3E7 222 aa21.28■■□□□ 1
RAPGEF3-212ENST00000490387 PASKQ96RG2 1323 aa21.28■■□□□ 1
RAPGEF3-212ENST00000490387 PNMA6EA0A0J9YXQ4 647 aa21.27■■□□□ 1
RAPGEF3-212ENST00000490387 ANKRD18BA2A2Z9 1011 aa21.27■■□□□ 1
RAPGEF3-212ENST00000490387 C6orf229H3BNL8 230 aa21.27■■□□□ 1
RAPGEF3-212ENST00000490387 GPSM2P81274 684 aa21.27■■□□□ 1
RAPGEF3-212ENST00000490387 ATP8B2P98198 1209 aa21.27■■□□□ 1
RAPGEF3-212ENST00000490387 AAMPQ13685 434 aa21.27■■□□□ 1
RAPGEF3-212ENST00000490387 POLA2Q14181 598 aa21.27■■□□□ 1
RAPGEF3-212ENST00000490387 WASHC4Q2M389 1173 aa21.27■■□□□ 1
RAPGEF3-212ENST00000490387 CIAPIN1Q6FI81 312 aa21.27■■□□□ 1
RAPGEF3-212ENST00000490387 A0A1B0GUL6 1792 aa21.27■■□□□ 1
RAPGEF3-212ENST00000490387 RAD17O75943 681 aa21.26■□□□□ 0.99
RAPGEF3-212ENST00000490387 TNIP1Q15025 636 aa21.26■□□□□ 0.99
RAPGEF3-212ENST00000490387 CCDC57Q2TAC2 916 aa21.26■□□□□ 0.99
RAPGEF3-212ENST00000490387 MAP1SQ66K74 1059 aaPredicted RBP21.26■□□□□ 0.99
RAPGEF3-212ENST00000490387 SIRT2Q8IXJ6 389 aa21.26■□□□□ 0.99
RAPGEF3-212ENST00000490387 SSH3Q8TE77 659 aa21.26■□□□□ 0.99
RAPGEF3-212ENST00000490387 SRGAP3O43295 1099 aa21.25■□□□□ 0.99
RAPGEF3-212ENST00000490387 ITGBL1O95965 494 aaPredicted RBP21.25■□□□□ 0.99
RAPGEF3-212ENST00000490387 PTPN12Q05209 780 aaKnown RBP21.25■□□□□ 0.99
RAPGEF3-212ENST00000490387 USP50Q70EL3 339 aaPredicted RBP21.25■□□□□ 0.99
RAPGEF3-212ENST00000490387 ANKRD18AQ8IVF6 992 aa21.25■□□□□ 0.99
RAPGEF3-212ENST00000490387 RPAP2Q8IXW5 612 aaPredicted RBP21.25■□□□□ 0.99
RAPGEF3-212ENST00000490387 CNTROBQ8N137 903 aa21.25■□□□□ 0.99
RAPGEF3-212ENST00000490387 EYA3Q99504 573 aa21.25■□□□□ 0.99
RAPGEF3-212ENST00000490387 GPRC5DQ9NZD1 345 aa21.25■□□□□ 0.99
RAPGEF3-212ENST00000490387 POLLQ9UGP5 575 aa21.25■□□□□ 0.99
RAPGEF3-212ENST00000490387 RIMBP2O15034 1052 aa21.24■□□□□ 0.99
RAPGEF3-212ENST00000490387 GMPSP49915 693 aaPredicted RBP21.24■□□□□ 0.99
RAPGEF3-212ENST00000490387 ZNF594Q96JF6 807 aaPredicted RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms