RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 SEC31BQ9NQW1 1179 aa20.57■□□□□ 0.88
PLOD3-216ENST00000489927 IFT57Q9NWB7 429 aa20.57■□□□□ 0.88
PLOD3-216ENST00000489927 RPS12P25398 132 aaKnown RBP20.56■□□□□ 0.88
PLOD3-216ENST00000489927 MYD88Q99836 296 aa20.56■□□□□ 0.88
PLOD3-216ENST00000489927 BRPF1P55201 1214 aaPredicted RBP20.55■□□□□ 0.88
PLOD3-216ENST00000489927 GNAI1P63096 354 aa20.55■□□□□ 0.88
PLOD3-216ENST00000489927 HUNKP57058 714 aa20.54■□□□□ 0.88
PLOD3-216ENST00000489927 RBM26Q5T8P6 1007 aaKnown RBP20.54■□□□□ 0.88
PLOD3-216ENST00000489927 KRT26Q7Z3Y9 468 aa20.54■□□□□ 0.88
PLOD3-216ENST00000489927 ZC3H12CQ9C0D7 883 aaKnown RBP20.54■□□□□ 0.88
PLOD3-216ENST00000489927 PODXL2Q9NZ53 605 aa20.54■□□□□ 0.88
PLOD3-216ENST00000489927 CA12O43570 354 aa20.53■□□□□ 0.88
PLOD3-216ENST00000489927 UFL1O94874 794 aa20.53■□□□□ 0.88
PLOD3-216ENST00000489927 HSP90B1P14625 803 aaKnown RBP20.53■□□□□ 0.88
PLOD3-216ENST00000489927 CALD1Q05682 793 aaKnown RBP20.53■□□□□ 0.88
PLOD3-216ENST00000489927 C8orf58Q8NAV2 365 aa20.53■□□□□ 0.88
PLOD3-216ENST00000489927 CCDC191Q8NCU4 936 aa20.53■□□□□ 0.88
PLOD3-216ENST00000489927 JARID2Q92833 1246 aaPredicted RBP20.53■□□□□ 0.88
PLOD3-216ENST00000489927 ZIC5Q96T25 663 aa20.53■□□□□ 0.88
PLOD3-216ENST00000489927 ANKIB1Q9P2G1 1089 aa20.53■□□□□ 0.88
PLOD3-216ENST00000489927 ADM5C9JUS6 153 aa20.52■□□□□ 0.88
PLOD3-216ENST00000489927 PCCAP05165 728 aaPredicted RBP20.52■□□□□ 0.88
PLOD3-216ENST00000489927 CCDC152Q4G0S7 254 aa20.52■□□□□ 0.88
PLOD3-216ENST00000489927 DCPSQ96C86 337 aaKnown RBP20.52■□□□□ 0.88
PLOD3-216ENST00000489927 CCDC85AQ96PX6 553 aaPredicted RBP20.52■□□□□ 0.88
PLOD3-216ENST00000489927 VIL1P09327 827 aaKnown RBP20.51■□□□□ 0.87
PLOD3-216ENST00000489927 NOGQ13253 232 aa20.51■□□□□ 0.87
PLOD3-216ENST00000489927 CWC25Q9NXE8 425 aaPredicted RBP20.51■□□□□ 0.87
PLOD3-216ENST00000489927 GGA1Q9UJY5 639 aa20.51■□□□□ 0.87
PLOD3-216ENST00000489927 PDE8AO60658 829 aa20.5■□□□□ 0.87
PLOD3-216ENST00000489927 KIF4BQ2VIQ3 1234 aa20.5■□□□□ 0.87
PLOD3-216ENST00000489927 METTL22Q9BUU2 404 aaPredicted RBP20.5■□□□□ 0.87
PLOD3-216ENST00000489927 GBA2Q9HCG7 927 aaPredicted RBP20.5■□□□□ 0.87
PLOD3-216ENST00000489927 SCN9AQ15858 1988 aa20.5■□□□□ 0.87
PLOD3-216ENST00000489927 CCDC85CA6NKD9 419 aa20.49■□□□□ 0.87
PLOD3-216ENST00000489927 G3V3G9 751 aa20.49■□□□□ 0.87
PLOD3-216ENST00000489927 DCAF8Q5TAQ9 597 aa20.49■□□□□ 0.87
PLOD3-216ENST00000489927 FAM155AB1AL88 458 aaPredicted RBP20.48■□□□□ 0.87
PLOD3-216ENST00000489927 DDX58O95786 925 aaKnown RBP20.48■□□□□ 0.87
PLOD3-216ENST00000489927 CCDC30Q5VVM6 783 aa20.48■□□□□ 0.87
PLOD3-216ENST00000489927 RGMBQ6NW40 437 aa20.48■□□□□ 0.87
PLOD3-216ENST00000489927 C2orf69Q8N8R5 385 aa20.48■□□□□ 0.87
PLOD3-216ENST00000489927 GGA3Q9NZ52 723 aa20.48■□□□□ 0.87
PLOD3-216ENST00000489927 ASTN2O75129 1339 aaPredicted RBP20.48■□□□□ 0.87
PLOD3-216ENST00000489927 TSPYL6Q8N831 410 aa20.47■□□□□ 0.87
PLOD3-216ENST00000489927 MAP3K2Q9Y2U5 619 aa20.47■□□□□ 0.87
PLOD3-216ENST00000489927 ZNF280AP59817 542 aaPredicted RBP20.46■□□□□ 0.87
PLOD3-216ENST00000489927 FAM161AQ3B820 660 aa20.46■□□□□ 0.87
PLOD3-216ENST00000489927 RSBN1LQ6PCB5 846 aaPredicted RBP20.46■□□□□ 0.87
PLOD3-216ENST00000489927 ANKRD18AQ8IVF6 992 aa20.46■□□□□ 0.87
PLOD3-216ENST00000489927 SULF1Q8IWU6 871 aa20.46■□□□□ 0.87
PLOD3-216ENST00000489927 MCOLN1Q9GZU1 580 aa20.46■□□□□ 0.87
PLOD3-216ENST00000489927 XDHP47989 1333 aa20.46■□□□□ 0.87
PLOD3-216ENST00000489927 ZNF609O15014 1411 aa20.45■□□□□ 0.86
PLOD3-216ENST00000489927 AGBL3Q8NEM8 1001 aa20.45■□□□□ 0.86
PLOD3-216ENST00000489927 CHMP4AQ9BY43 222 aa20.45■□□□□ 0.86
PLOD3-216ENST00000489927 POLR2AP24928 1970 aaKnown RBP20.45■□□□□ 0.86
PLOD3-216ENST00000489927 PI4KAP2A4QPH2 592 aa20.44■□□□□ 0.86
PLOD3-216ENST00000489927 IGKV5-2P06315 115 aa20.44■□□□□ 0.86
PLOD3-216ENST00000489927 ZNF157P51786 506 aaPredicted RBP20.44■□□□□ 0.86
PLOD3-216ENST00000489927 CTSWP56202 376 aa20.44■□□□□ 0.86
PLOD3-216ENST00000489927 ANGEL2Q5VTE6 544 aaKnown RBP20.44■□□□□ 0.86
PLOD3-216ENST00000489927 PI4KAP1Q8N8J0 262 aa20.44■□□□□ 0.86
PLOD3-216ENST00000489927 CCDC102AQ96A19 550 aa20.44■□□□□ 0.86
PLOD3-216ENST00000489927 WTIPA6NIX2 430 aaPredicted RBP20.43■□□□□ 0.86
PLOD3-216ENST00000489927 ATP2B4P23634 1241 aa20.43■□□□□ 0.86
PLOD3-216ENST00000489927 KIF23Q02241 960 aaPredicted RBP20.43■□□□□ 0.86
PLOD3-216ENST00000489927 SCARF1Q14162 830 aa20.43■□□□□ 0.86
PLOD3-216ENST00000489927 KSR2Q6VAB6 950 aa20.43■□□□□ 0.86
PLOD3-216ENST00000489927 TSR2Q969E8 191 aaKnown RBP20.43■□□□□ 0.86
PLOD3-216ENST00000489927 CDCA5Q96FF9 252 aa20.43■□□□□ 0.86
PLOD3-216ENST00000489927 GMLQ99445 158 aa20.43■□□□□ 0.86
PLOD3-216ENST00000489927 CDC5LQ99459 802 aaKnown RBP20.43■□□□□ 0.86
PLOD3-216ENST00000489927 CASP8AP2Q9UKL3 1982 aa20.43■□□□□ 0.86
PLOD3-216ENST00000489927 USP17L8P0C7I0 530 aa20.42■□□□□ 0.86
PLOD3-216ENST00000489927 DGKZQ13574 1117 aa20.42■□□□□ 0.86
PLOD3-216ENST00000489927 PODNQ7Z5L7 613 aa20.42■□□□□ 0.86
PLOD3-216ENST00000489927 TTLL11Q8NHH1 800 aa20.42■□□□□ 0.86
PLOD3-216ENST00000489927 USP17L3A6NCW0 530 aa20.41■□□□□ 0.86
PLOD3-216ENST00000489927 USP17L4A6NCW7 530 aa20.41■□□□□ 0.86
PLOD3-216ENST00000489927 CWF19L2Q2TBE0 894 aaKnown RBP20.41■□□□□ 0.86
PLOD3-216ENST00000489927 USP17L1Q7RTZ2 530 aa20.41■□□□□ 0.86
PLOD3-216ENST00000489927 GREM2Q9H772 168 aa20.41■□□□□ 0.86
PLOD3-216ENST00000489927 MYOZ2Q9NPC6 264 aa20.41■□□□□ 0.86
PLOD3-216ENST00000489927 PSME4Q14997 1843 aa20.41■□□□□ 0.86
PLOD3-216ENST00000489927 SLC10A3P09131 477 aa20.4■□□□□ 0.86
PLOD3-216ENST00000489927 RGS19P49795 217 aa20.4■□□□□ 0.86
PLOD3-216ENST00000489927 STK31Q9BXU1 1019 aa20.4■□□□□ 0.86
PLOD3-216ENST00000489927 BSDC1Q9NW68 430 aaPredicted RBP20.4■□□□□ 0.86
PLOD3-216ENST00000489927 SAGE1Q9NXZ1 904 aa20.4■□□□□ 0.86
PLOD3-216ENST00000489927 MINPP1Q9UNW1 487 aa20.4■□□□□ 0.86
PLOD3-216ENST00000489927 MED23Q9ULK4 1368 aa20.39■□□□□ 0.85
PLOD3-216ENST00000489927 MLLT1Q03111 559 aaPredicted RBP20.39■□□□□ 0.85
PLOD3-216ENST00000489927 NEXNQ0ZGT2 675 aa20.39■□□□□ 0.85
PLOD3-216ENST00000489927 RNF186Q9NXI6 227 aa20.39■□□□□ 0.85
PLOD3-216ENST00000489927 NEURL1BA8MQ27 555 aa20.38■□□□□ 0.85
PLOD3-216ENST00000489927 CCDC184Q52MB2 194 aa20.38■□□□□ 0.85
PLOD3-216ENST00000489927 G2E3Q7L622 706 aa20.38■□□□□ 0.85
PLOD3-216ENST00000489927 SCAF8Q9UPN6 1271 aaKnown RBP20.38■□□□□ 0.85
PLOD3-216ENST00000489927 PITPNM2Q9BZ72 1349 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms