RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 DEFB115Q30KQ5 88 aa24.95■■□□□ 1.58
TNFRSF1B-202ENST00000489921 TRPM4Q8TD43 1214 aa24.95■■□□□ 1.58
TNFRSF1B-202ENST00000489921 BCL2L13Q9BXK5 485 aa24.95■■□□□ 1.58
TNFRSF1B-202ENST00000489921 NEURL1BA8MQ27 555 aa24.94■■□□□ 1.58
TNFRSF1B-202ENST00000489921 WDR63Q8IWG1 891 aa24.94■■□□□ 1.58
TNFRSF1B-202ENST00000489921 SPINK5Q9NQ38 1064 aaPredicted RBP24.94■■□□□ 1.58
TNFRSF1B-202ENST00000489921 SALL2Q9Y467 1007 aaPredicted RBP24.94■■□□□ 1.58
TNFRSF1B-202ENST00000489921 ECE2O60344 883 aa24.93■■□□□ 1.58
TNFRSF1B-202ENST00000489921 VAMP4O75379 141 aa24.93■■□□□ 1.58
TNFRSF1B-202ENST00000489921 TTLL11Q8NHH1 800 aa24.93■■□□□ 1.58
TNFRSF1B-202ENST00000489921 DPF2Q92785 391 aa24.93■■□□□ 1.58
TNFRSF1B-202ENST00000489921 EYA3Q99504 573 aa24.93■■□□□ 1.58
TNFRSF1B-202ENST00000489921 SPEF2Q9C093 1822 aa24.92■■□□□ 1.58
TNFRSF1B-202ENST00000489921 H7C1W4 665 aa24.92■■□□□ 1.58
TNFRSF1B-202ENST00000489921 FOXN1O15353 648 aa24.92■■□□□ 1.58
TNFRSF1B-202ENST00000489921 CTSWP56202 376 aa24.92■■□□□ 1.58
TNFRSF1B-202ENST00000489921 MICALL2Q8IY33 904 aa24.92■■□□□ 1.58
TNFRSF1B-202ENST00000489921 ZC3H15Q8WU90 426 aaKnown RBP24.92■■□□□ 1.58
TNFRSF1B-202ENST00000489921 FLIIQ13045 1269 aa24.91■■□□□ 1.58
TNFRSF1B-202ENST00000489921 GLIS2Q9BZE0 524 aaPredicted RBP24.91■■□□□ 1.58
TNFRSF1B-202ENST00000489921 ABT1Q9ULW3 272 aaKnown RBP24.91■■□□□ 1.58
TNFRSF1B-202ENST00000489921 WDR33Q9C0J8 1336 aaKnown RBP24.9■■□□□ 1.58
TNFRSF1B-202ENST00000489921 WTIPA6NIX2 430 aaPredicted RBP24.9■■□□□ 1.58
TNFRSF1B-202ENST00000489921 UFL1O94874 794 aa24.9■■□□□ 1.58
TNFRSF1B-202ENST00000489921 EGFRP00533 1210 aa24.9■■□□□ 1.58
TNFRSF1B-202ENST00000489921 NEXNQ0ZGT2 675 aa24.9■■□□□ 1.58
TNFRSF1B-202ENST00000489921 ZC3H12CQ9C0D7 883 aaKnown RBP24.9■■□□□ 1.58
TNFRSF1B-202ENST00000489921 WBP1LQ9NX94 342 aa24.9■■□□□ 1.58
TNFRSF1B-202ENST00000489921 ANKIB1Q9P2G1 1089 aa24.9■■□□□ 1.58
TNFRSF1B-202ENST00000489921 POLR2AP24928 1970 aaKnown RBP24.9■■□□□ 1.58
TNFRSF1B-202ENST00000489921 PSME4Q14997 1843 aa24.9■■□□□ 1.58
TNFRSF1B-202ENST00000489921 CASP7P55210 303 aa24.89■■□□□ 1.58
TNFRSF1B-202ENST00000489921 EXOSC9Q06265 439 aaKnown RBP24.89■■□□□ 1.58
TNFRSF1B-202ENST00000489921 SAMD7Q7Z3H4 446 aa24.89■■□□□ 1.58
TNFRSF1B-202ENST00000489921 ANKRD18AQ8IVF6 992 aa24.89■■□□□ 1.58
TNFRSF1B-202ENST00000489921 GREM2Q9H772 168 aa24.89■■□□□ 1.58
TNFRSF1B-202ENST00000489921 GGA1Q9UJY5 639 aa24.89■■□□□ 1.58
TNFRSF1B-202ENST00000489921 THSD7BQ9C0I4 1608 aa24.89■■□□□ 1.57
TNFRSF1B-202ENST00000489921 H7C1D1 291 aa24.88■■□□□ 1.57
TNFRSF1B-202ENST00000489921 VIL1P09327 827 aaKnown RBP24.88■■□□□ 1.57
TNFRSF1B-202ENST00000489921 TLL2Q9Y6L7 1015 aa24.88■■□□□ 1.57
TNFRSF1B-202ENST00000489921 GCKRQ14397 625 aa24.87■■□□□ 1.57
TNFRSF1B-202ENST00000489921 UBE3BQ7Z3V4 1068 aa24.87■■□□□ 1.57
TNFRSF1B-202ENST00000489921 TNS4Q8IZW8 715 aa24.87■■□□□ 1.57
TNFRSF1B-202ENST00000489921 XDHP47989 1333 aa24.86■■□□□ 1.57
TNFRSF1B-202ENST00000489921 RPS12P25398 132 aaKnown RBP24.86■■□□□ 1.57
TNFRSF1B-202ENST00000489921 DLK2Q6UY11 383 aa24.86■■□□□ 1.57
TNFRSF1B-202ENST00000489921 BSDC1Q9NW68 430 aaPredicted RBP24.86■■□□□ 1.57
TNFRSF1B-202ENST00000489921 MINPP1Q9UNW1 487 aa24.86■■□□□ 1.57
TNFRSF1B-202ENST00000489921 ZNF646O15015 1829 aaPredicted RBP24.85■■□□□ 1.57
TNFRSF1B-202ENST00000489921 DNAAF4Q8WXU2 420 aa24.85■■□□□ 1.57
TNFRSF1B-202ENST00000489921 CDC5LQ99459 802 aaKnown RBP24.85■■□□□ 1.57
TNFRSF1B-202ENST00000489921 PLA2G12BQ9BX93 195 aa24.85■■□□□ 1.57
TNFRSF1B-202ENST00000489921 CELF2O95319 508 aaKnown RBP24.84■■□□□ 1.57
TNFRSF1B-202ENST00000489921 FKBP5Q13451 457 aaPredicted RBP24.84■■□□□ 1.57
TNFRSF1B-202ENST00000489921 TBC1D10BQ4KMP7 808 aaPredicted RBP24.84■■□□□ 1.57
TNFRSF1B-202ENST00000489921 CYP4F22Q6NT55 531 aa24.84■■□□□ 1.57
TNFRSF1B-202ENST00000489921 CDC37L1Q7L3B6 337 aa24.84■■□□□ 1.57
TNFRSF1B-202ENST00000489921 SAPCD2Q86UD0 394 aa24.84■■□□□ 1.57
TNFRSF1B-202ENST00000489921 CAPNS2Q96L46 248 aa24.84■■□□□ 1.57
TNFRSF1B-202ENST00000489921 ATP2B4P23634 1241 aa24.83■■□□□ 1.57
TNFRSF1B-202ENST00000489921 FAM9BQ8IZU0 186 aa24.83■■□□□ 1.57
TNFRSF1B-202ENST00000489921 LINS1Q8NG48 757 aa24.83■■□□□ 1.57
TNFRSF1B-202ENST00000489921 ZNF609O15014 1411 aa24.83■■□□□ 1.57
TNFRSF1B-202ENST00000489921 CSF1RP07333 972 aa24.82■■□□□ 1.56
TNFRSF1B-202ENST00000489921 USP48Q86UV5 1035 aa24.82■■□□□ 1.56
TNFRSF1B-202ENST00000489921 GMLQ99445 158 aa24.81■■□□□ 1.56
TNFRSF1B-202ENST00000489921 RBM26Q5T8P6 1007 aaKnown RBP24.8■■□□□ 1.56
TNFRSF1B-202ENST00000489921 PRDM10Q9NQV6 1147 aa24.8■■□□□ 1.56
TNFRSF1B-202ENST00000489921 ZNF521Q96K83 1311 aa24.8■■□□□ 1.56
TNFRSF1B-202ENST00000489921 F6X3S4 739 aa24.79■■□□□ 1.56
TNFRSF1B-202ENST00000489921 CTCFP49711 727 aaPredicted RBP24.79■■□□□ 1.56
TNFRSF1B-202ENST00000489921 CCT4P50991 539 aaKnown RBP24.79■■□□□ 1.56
TNFRSF1B-202ENST00000489921 ZNF280AP59817 542 aaPredicted RBP24.79■■□□□ 1.56
TNFRSF1B-202ENST00000489921 BEND3Q5T5X7 828 aa24.79■■□□□ 1.56
TNFRSF1B-202ENST00000489921 RSBN1LQ6PCB5 846 aaPredicted RBP24.79■■□□□ 1.56
TNFRSF1B-202ENST00000489921 MED23Q9ULK4 1368 aa24.79■■□□□ 1.56
TNFRSF1B-202ENST00000489921 G3V3G9 751 aa24.78■■□□□ 1.56
TNFRSF1B-202ENST00000489921 AOC2O75106 756 aa24.78■■□□□ 1.56
TNFRSF1B-202ENST00000489921 ITGA6P23229 1130 aa24.78■■□□□ 1.56
TNFRSF1B-202ENST00000489921 ECE1P42892 770 aa24.78■■□□□ 1.56
TNFRSF1B-202ENST00000489921 MAP2K1Q02750 393 aaPredicted RBP24.78■■□□□ 1.56
TNFRSF1B-202ENST00000489921 FAM161AQ3B820 660 aa24.78■■□□□ 1.56
TNFRSF1B-202ENST00000489921 DCAF8Q5TAQ9 597 aa24.78■■□□□ 1.56
TNFRSF1B-202ENST00000489921 PODNQ7Z5L7 613 aa24.78■■□□□ 1.56
TNFRSF1B-202ENST00000489921 TXNRD3Q86VQ6 643 aa24.78■■□□□ 1.56
TNFRSF1B-202ENST00000489921 AGBL3Q8NEM8 1001 aa24.78■■□□□ 1.56
TNFRSF1B-202ENST00000489921 AIDAQ96BJ3 306 aa24.78■■□□□ 1.56
TNFRSF1B-202ENST00000489921 HHIPL1Q96JK4 782 aa24.78■■□□□ 1.56
TNFRSF1B-202ENST00000489921 MYH16Q9H6N6 1097 aa24.78■■□□□ 1.56
TNFRSF1B-202ENST00000489921 ASTN2O75129 1339 aaPredicted RBP24.78■■□□□ 1.56
TNFRSF1B-202ENST00000489921 LBX1P52954 281 aa24.77■■□□□ 1.56
TNFRSF1B-202ENST00000489921 FOXO4P98177 505 aa24.77■■□□□ 1.56
TNFRSF1B-202ENST00000489921 KIF4BQ2VIQ3 1234 aa24.77■■□□□ 1.56
TNFRSF1B-202ENST00000489921 PAXIP1Q6ZW49 1069 aaPredicted RBP24.77■■□□□ 1.56
TNFRSF1B-202ENST00000489921 ZNF408Q9H9D4 720 aa24.77■■□□□ 1.56
TNFRSF1B-202ENST00000489921 HSPA8P11142 646 aaKnown RBP24.76■■□□□ 1.55
TNFRSF1B-202ENST00000489921 KRT26Q7Z3Y9 468 aa24.76■■□□□ 1.55
TNFRSF1B-202ENST00000489921 USP17L3A6NCW0 530 aa24.75■■□□□ 1.55
TNFRSF1B-202ENST00000489921 USP17L4A6NCW7 530 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms