RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 KRT26Q7Z3Y9 468 aa25.07■■□□□ 1.6
APTX-229ENST00000489583 PRKRIP1Q9H875 184 aaPredicted RBP25.07■■□□□ 1.6
APTX-229ENST00000489583 CWC25Q9NXE8 425 aaPredicted RBP25.07■■□□□ 1.6
APTX-229ENST00000489583 GGA1Q9UJY5 639 aa25.07■■□□□ 1.6
APTX-229ENST00000489583 UFL1O94874 794 aa25.06■■□□□ 1.6
APTX-229ENST00000489583 TBC1D10BQ4KMP7 808 aaPredicted RBP25.06■■□□□ 1.6
APTX-229ENST00000489583 SAMD7Q7Z3H4 446 aa25.06■■□□□ 1.6
APTX-229ENST00000489583 C2orf69Q8N8R5 385 aa25.06■■□□□ 1.6
APTX-229ENST00000489583 TBC1D16Q8TBP0 767 aa25.06■■□□□ 1.6
APTX-229ENST00000489583 ABHD8Q96I13 439 aa25.06■■□□□ 1.6
APTX-229ENST00000489583 PDE8AO60658 829 aa25.05■■□□□ 1.6
APTX-229ENST00000489583 BRPF1P55201 1214 aaPredicted RBP25.05■■□□□ 1.6
APTX-229ENST00000489583 HUNKP57058 714 aa25.05■■□□□ 1.6
APTX-229ENST00000489583 NOGQ13253 232 aa25.05■■□□□ 1.6
APTX-229ENST00000489583 PHAXQ9H814 394 aaKnown RBP25.05■■□□□ 1.6
APTX-229ENST00000489583 DDX60Q8IY21 1712 aaKnown RBP25.04■■□□□ 1.6
APTX-229ENST00000489583 ZNF853P0CG23 659 aa25.04■■□□□ 1.6
APTX-229ENST00000489583 LRRC37AA6NMS7 1700 aa25.03■■□□□ 1.6
APTX-229ENST00000489583 TAF1P21675 1872 aa25.03■■□□□ 1.6
APTX-229ENST00000489583 PCCAP05165 728 aaPredicted RBP25.03■■□□□ 1.6
APTX-229ENST00000489583 NEXNQ0ZGT2 675 aa25.03■■□□□ 1.6
APTX-229ENST00000489583 ANKRD18AQ8IVF6 992 aa25.03■■□□□ 1.6
APTX-229ENST00000489583 SULF1Q8IWU6 871 aa25.03■■□□□ 1.6
APTX-229ENST00000489583 STK31Q9BXU1 1019 aa25.03■■□□□ 1.6
APTX-229ENST00000489583 PODXL2Q9NZ53 605 aa25.03■■□□□ 1.6
APTX-229ENST00000489583 SHTN1A0MZ66 631 aa25.02■■□□□ 1.6
APTX-229ENST00000489583 TSKSQ9UJT2 592 aa25.02■■□□□ 1.6
APTX-229ENST00000489583 DUOX1Q9NRD9 1551 aa25.01■■□□□ 1.59
APTX-229ENST00000489583 KIF4BQ2VIQ3 1234 aa25.01■■□□□ 1.59
APTX-229ENST00000489583 CDC5LQ99459 802 aaKnown RBP25.01■■□□□ 1.59
APTX-229ENST00000489583 GBA2Q9HCG7 927 aaPredicted RBP25.01■■□□□ 1.59
APTX-229ENST00000489583 SEC31BQ9NQW1 1179 aa25.01■■□□□ 1.59
APTX-229ENST00000489583 THSD7BQ9C0I4 1608 aa25.01■■□□□ 1.59
APTX-229ENST00000489583 CCDC85CA6NKD9 419 aa25■■□□□ 1.59
APTX-229ENST00000489583 CCDC102AQ96A19 550 aa25■■□□□ 1.59
APTX-229ENST00000489583 METTL22Q9BUU2 404 aaPredicted RBP25■■□□□ 1.59
APTX-229ENST00000489583 VIL1P09327 827 aaKnown RBP24.99■■□□□ 1.59
APTX-229ENST00000489583 XDHP47989 1333 aa24.99■■□□□ 1.59
APTX-229ENST00000489583 CCDC85AQ96PX6 553 aaPredicted RBP24.99■■□□□ 1.59
APTX-229ENST00000489583 RGMBQ6NW40 437 aa24.98■■□□□ 1.59
APTX-229ENST00000489583 KCNQ5Q9NR82 932 aa24.98■■□□□ 1.59
APTX-229ENST00000489583 MAP3K2Q9Y2U5 619 aa24.98■■□□□ 1.59
APTX-229ENST00000489583 ATP2B4P23634 1241 aa24.97■■□□□ 1.59
APTX-229ENST00000489583 C8orf58Q8NAV2 365 aa24.97■■□□□ 1.59
APTX-229ENST00000489583 AGBL3Q8NEM8 1001 aa24.97■■□□□ 1.59
APTX-229ENST00000489583 ZNF157P51786 506 aaPredicted RBP24.96■■□□□ 1.59
APTX-229ENST00000489583 GGA3Q9NZ52 723 aa24.96■■□□□ 1.59
APTX-229ENST00000489583 RTL9Q8NET4 1388 aa24.95■■□□□ 1.59
APTX-229ENST00000489583 ADM5C9JUS6 153 aa24.95■■□□□ 1.58
APTX-229ENST00000489583 RSBN1LQ6PCB5 846 aaPredicted RBP24.95■■□□□ 1.58
APTX-229ENST00000489583 KSR2Q6VAB6 950 aa24.95■■□□□ 1.58
APTX-229ENST00000489583 JARID2Q92833 1246 aaPredicted RBP24.95■■□□□ 1.58
APTX-229ENST00000489583 PODNQ7Z5L7 613 aa24.94■■□□□ 1.58
APTX-229ENST00000489583 PI4KAP2A4QPH2 592 aa24.93■■□□□ 1.58
APTX-229ENST00000489583 EGFRP00533 1210 aa24.93■■□□□ 1.58
APTX-229ENST00000489583 CTSWP56202 376 aa24.93■■□□□ 1.58
APTX-229ENST00000489583 PI4KAP1Q8N8J0 262 aa24.93■■□□□ 1.58
APTX-229ENST00000489583 USP17L3A6NCW0 530 aa24.92■■□□□ 1.58
APTX-229ENST00000489583 USP17L4A6NCW7 530 aa24.92■■□□□ 1.58
APTX-229ENST00000489583 USP17L8P0C7I0 530 aa24.92■■□□□ 1.58
APTX-229ENST00000489583 USP17L1Q7RTZ2 530 aa24.92■■□□□ 1.58
APTX-229ENST00000489583 OGFOD1Q8N543 542 aa24.92■■□□□ 1.58
APTX-229ENST00000489583 SCARF1Q14162 830 aa24.91■■□□□ 1.58
APTX-229ENST00000489583 FBXW7Q969H0 707 aa24.91■■□□□ 1.58
APTX-229ENST00000489583 IGHMBP2P38935 993 aaKnown RBP24.9■■□□□ 1.58
APTX-229ENST00000489583 DGKZQ13574 1117 aa24.9■■□□□ 1.58
APTX-229ENST00000489583 ANGEL2Q5VTE6 544 aaKnown RBP24.9■■□□□ 1.58
APTX-229ENST00000489583 MYOZ2Q9NPC6 264 aa24.9■■□□□ 1.58
APTX-229ENST00000489583 BSDC1Q9NW68 430 aaPredicted RBP24.9■■□□□ 1.58
APTX-229ENST00000489583 ZNF280AP59817 542 aaPredicted RBP24.89■■□□□ 1.58
APTX-229ENST00000489583 MLLT1Q03111 559 aaPredicted RBP24.89■■□□□ 1.58
APTX-229ENST00000489583 DLK2Q6UY11 383 aa24.89■■□□□ 1.58
APTX-229ENST00000489583 REM2Q8IYK8 340 aaPredicted RBP24.89■■□□□ 1.58
APTX-229ENST00000489583 CDCA5Q96FF9 252 aa24.89■■□□□ 1.58
APTX-229ENST00000489583 MCOLN1Q9GZU1 580 aa24.89■■□□□ 1.58
APTX-229ENST00000489583 SAGE1Q9NXZ1 904 aa24.89■■□□□ 1.58
APTX-229ENST00000489583 TWISTNBQ3B726 338 aaPredicted RBP24.88■■□□□ 1.57
APTX-229ENST00000489583 FAM161AQ3B820 660 aa24.88■■□□□ 1.57
APTX-229ENST00000489583 TSR2Q969E8 191 aaKnown RBP24.88■■□□□ 1.57
APTX-229ENST00000489583 SLC4A2P04920 1241 aa24.87■■□□□ 1.57
APTX-229ENST00000489583 FKBP1BP68106 108 aa24.87■■□□□ 1.57
APTX-229ENST00000489583 KIF23Q02241 960 aaPredicted RBP24.87■■□□□ 1.57
APTX-229ENST00000489583 TSPYL6Q8N831 410 aa24.87■■□□□ 1.57
APTX-229ENST00000489583 TTLL11Q8NHH1 800 aa24.87■■□□□ 1.57
APTX-229ENST00000489583 MPHOSPH8Q99549 860 aa24.87■■□□□ 1.57
APTX-229ENST00000489583 MYH16Q9H6N6 1097 aa24.87■■□□□ 1.57
APTX-229ENST00000489583 NF2P35240 595 aa24.86■■□□□ 1.57
APTX-229ENST00000489583 MYO3BQ8WXR4 1341 aa24.86■■□□□ 1.57
APTX-229ENST00000489583 PITPNM2Q9BZ72 1349 aa24.86■■□□□ 1.57
APTX-229ENST00000489583 MED23Q9ULK4 1368 aa24.85■■□□□ 1.57
APTX-229ENST00000489583 IGKV5-2P06315 115 aa24.85■■□□□ 1.57
APTX-229ENST00000489583 KCNJ4P48050 445 aa24.85■■□□□ 1.57
APTX-229ENST00000489583 CCT4P50991 539 aaKnown RBP24.85■■□□□ 1.57
APTX-229ENST00000489583 CCDC27Q2M243 656 aa24.85■■□□□ 1.57
APTX-229ENST00000489583 UBE3BQ7Z3V4 1068 aa24.85■■□□□ 1.57
APTX-229ENST00000489583 ANKRD2Q9GZV1 360 aa24.85■■□□□ 1.57
APTX-229ENST00000489583 GREM2Q9H772 168 aa24.85■■□□□ 1.57
APTX-229ENST00000489583 MINPP1Q9UNW1 487 aa24.85■■□□□ 1.57
APTX-229ENST00000489583 NEURL1BA8MQ27 555 aa24.84■■□□□ 1.57
APTX-229ENST00000489583 FAM155AB1AL88 458 aaPredicted RBP24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms