RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 JDP2Q8WYK2 163 aa15.45■□□□□ 0.06
SMARCD3-213ENST00000489503 MEIS3Q99687 375 aa15.45■□□□□ 0.06
SMARCD3-213ENST00000489503 RRAGCQ9HB90 399 aa15.45■□□□□ 0.06
SMARCD3-213ENST00000489503 ANKIB1Q9P2G1 1089 aa15.45■□□□□ 0.06
SMARCD3-213ENST00000489503 FZD9O00144 591 aa15.44■□□□□ 0.06
SMARCD3-213ENST00000489503 IFIT5Q13325 482 aaKnown RBP15.44■□□□□ 0.06
SMARCD3-213ENST00000489503 ZKSCAN2Q63HK3 967 aa15.44■□□□□ 0.06
SMARCD3-213ENST00000489503 ARHGAP45Q92619 1136 aa15.44■□□□□ 0.06
SMARCD3-213ENST00000489503 BSDC1Q9NW68 430 aaPredicted RBP15.44■□□□□ 0.06
SMARCD3-213ENST00000489503 GGA1Q9UJY5 639 aa15.44■□□□□ 0.06
SMARCD3-213ENST00000489503 MINPP1Q9UNW1 487 aa15.44■□□□□ 0.06
SMARCD3-213ENST00000489503 XDHP47989 1333 aa15.43■□□□□ 0.06
SMARCD3-213ENST00000489503 IPO8O15397 1037 aaKnown RBP15.43■□□□□ 0.06
SMARCD3-213ENST00000489503 UBTFL1P0CB47 393 aaPredicted RBP15.43■□□□□ 0.06
SMARCD3-213ENST00000489503 TAF7LQ5H9L4 462 aa15.43■□□□□ 0.06
SMARCD3-213ENST00000489503 INTS3Q68E01 1043 aaKnown RBP15.43■□□□□ 0.06
SMARCD3-213ENST00000489503 TMEM57Q8N5G2 664 aa15.43■□□□□ 0.06
SMARCD3-213ENST00000489503 MPHOSPH8Q99549 860 aa15.43■□□□□ 0.06
SMARCD3-213ENST00000489503 DBNDD1Q9H9R9 158 aa15.43■□□□□ 0.06
SMARCD3-213ENST00000489503 PODXL2Q9NZ53 605 aa15.43■□□□□ 0.06
SMARCD3-213ENST00000489503 GJA3Q9Y6H8 435 aa15.43■□□□□ 0.06
SMARCD3-213ENST00000489503 SCN9AQ15858 1988 aa15.42■□□□□ 0.06
SMARCD3-213ENST00000489503 YDJCA8MPS7 323 aa15.42■□□□□ 0.06
SMARCD3-213ENST00000489503 POTECB2RU33 542 aa15.42■□□□□ 0.06
SMARCD3-213ENST00000489503 RLBP1P12271 317 aa15.42■□□□□ 0.06
SMARCD3-213ENST00000489503 DOK7Q18PE1 504 aa15.42■□□□□ 0.06
SMARCD3-213ENST00000489503 WASHC4Q2M389 1173 aa15.42■□□□□ 0.06
SMARCD3-213ENST00000489503 CCDC57Q2TAC2 916 aa15.42■□□□□ 0.06
SMARCD3-213ENST00000489503 RABL6Q3YEC7 729 aaPredicted RBP15.42■□□□□ 0.06
SMARCD3-213ENST00000489503 DPY19L2Q6NUT2 758 aa15.42■□□□□ 0.06
SMARCD3-213ENST00000489503 HELBQ8NG08 1087 aaPredicted RBP15.42■□□□□ 0.06
SMARCD3-213ENST00000489503 KLHDC4Q8TBB5 520 aa15.42■□□□□ 0.06
SMARCD3-213ENST00000489503 LRRFIP2Q9Y608 721 aaKnown RBP15.42■□□□□ 0.06
SMARCD3-213ENST00000489503 SNAP23O00161 211 aa15.41■□□□□ 0.06
SMARCD3-213ENST00000489503 KLRK1P26718 216 aa15.41■□□□□ 0.06
SMARCD3-213ENST00000489503 EIF6P56537 245 aaKnown RBP15.41■□□□□ 0.06
SMARCD3-213ENST00000489503 CHRNDQ07001 517 aa15.41■□□□□ 0.06
SMARCD3-213ENST00000489503 PUS3Q9BZE2 481 aaKnown RBP15.41■□□□□ 0.06
SMARCD3-213ENST00000489503 ECE2O60344 883 aa15.4■□□□□ 0.06
SMARCD3-213ENST00000489503 TAF5LO75529 589 aa15.4■□□□□ 0.06
SMARCD3-213ENST00000489503 RAD17O75943 681 aa15.4■□□□□ 0.06
SMARCD3-213ENST00000489503 CXCL9Q07325 125 aa15.4■□□□□ 0.06
SMARCD3-213ENST00000489503 EYA3Q99504 573 aa15.4■□□□□ 0.06
SMARCD3-213ENST00000489503 RCAN3Q9UKA8 241 aa15.4■□□□□ 0.06
SMARCD3-213ENST00000489503 ZNRF3Q9ULT6 936 aa15.4■□□□□ 0.06
SMARCD3-213ENST00000489503 ATP2B4P23634 1241 aa15.39■□□□□ 0.05
SMARCD3-213ENST00000489503 FTSJ3Q8IY81 847 aaKnown RBP15.39■□□□□ 0.05
SMARCD3-213ENST00000489503 PANK1Q8TE04 598 aa15.39■□□□□ 0.05
SMARCD3-213ENST00000489503 VPS33BQ9H267 617 aa15.39■□□□□ 0.05
SMARCD3-213ENST00000489503 KCNQ5Q9NR82 932 aa15.39■□□□□ 0.05
SMARCD3-213ENST00000489503 CNNM1Q9NRU3 951 aa15.39■□□□□ 0.05
SMARCD3-213ENST00000489503 SCN4AP35499 1836 aa15.38■□□□□ 0.05
SMARCD3-213ENST00000489503 PLIN1O60240 522 aa15.38■□□□□ 0.05
SMARCD3-213ENST00000489503 C1QTNF8P60827 252 aa15.38■□□□□ 0.05
SMARCD3-213ENST00000489503 LRRC24Q50LG9 513 aa15.38■□□□□ 0.05
SMARCD3-213ENST00000489503 LDHAL6AQ6ZMR3 332 aa15.38■□□□□ 0.05
SMARCD3-213ENST00000489503 TXNRD3Q86VQ6 643 aa15.38■□□□□ 0.05
SMARCD3-213ENST00000489503 DZIP1LQ8IYY4 767 aaKnown RBP15.38■□□□□ 0.05
SMARCD3-213ENST00000489503 GPC2Q8N158 579 aa15.38■□□□□ 0.05
SMARCD3-213ENST00000489503 L3MBTL3Q96JM7 780 aaPredicted RBP15.38■□□□□ 0.05
SMARCD3-213ENST00000489503 ZC3H12CQ9C0D7 883 aaKnown RBP15.38■□□□□ 0.05
SMARCD3-213ENST00000489503 ZNF804BA4D1E1 1349 aa15.38■□□□□ 0.05
SMARCD3-213ENST00000489503 MED23Q9ULK4 1368 aa15.37■□□□□ 0.05
SMARCD3-213ENST00000489503 POTEIP0CG38 1075 aa15.37■□□□□ 0.05
SMARCD3-213ENST00000489503 POTEJP0CG39 1038 aa15.37■□□□□ 0.05
SMARCD3-213ENST00000489503 VEGFAP15692 232 aaPredicted RBP15.37■□□□□ 0.05
SMARCD3-213ENST00000489503 KCNJ4P48050 445 aa15.37■□□□□ 0.05
SMARCD3-213ENST00000489503 RFX5P48382 616 aaPredicted RBP15.37■□□□□ 0.05
SMARCD3-213ENST00000489503 ITPRIPQ8IWB1 547 aa15.37■□□□□ 0.05
SMARCD3-213ENST00000489503 C16orf71Q8IYS4 520 aaPredicted RBP15.37■□□□□ 0.05
SMARCD3-213ENST00000489503 ANKRD2Q9GZV1 360 aa15.37■□□□□ 0.05
SMARCD3-213ENST00000489503 C1orf115Q9H7X2 142 aa15.37■□□□□ 0.05
SMARCD3-213ENST00000489503 ZNF646O15015 1829 aaPredicted RBP15.37■□□□□ 0.05
SMARCD3-213ENST00000489503 PSME4Q14997 1843 aa15.37■□□□□ 0.05
SMARCD3-213ENST00000489503 SHTN1A0MZ66 631 aa15.36■□□□□ 0.05
SMARCD3-213ENST00000489503 SCNN1DP51172 638 aa15.36■□□□□ 0.05
SMARCD3-213ENST00000489503 CIAPIN1Q6FI81 312 aa15.36■□□□□ 0.05
SMARCD3-213ENST00000489503 G3V3G9 751 aa15.35■□□□□ 0.05
SMARCD3-213ENST00000489503 PSMD14O00487 310 aa15.35■□□□□ 0.05
SMARCD3-213ENST00000489503 GNAI3P08754 354 aa15.35■□□□□ 0.05
SMARCD3-213ENST00000489503 GMPSP49915 693 aaPredicted RBP15.35■□□□□ 0.05
SMARCD3-213ENST00000489503 DCAF8Q5TAQ9 597 aa15.35■□□□□ 0.05
SMARCD3-213ENST00000489503 SIL1Q9H173 461 aa15.35■□□□□ 0.05
SMARCD3-213ENST00000489503 TAF1DQ9H5J8 278 aaPredicted RBP15.35■□□□□ 0.05
SMARCD3-213ENST00000489503 HACL1Q9UJ83 578 aa15.35■□□□□ 0.05
SMARCD3-213ENST00000489503 PA2G4Q9UQ80 394 aaKnown RBP15.35■□□□□ 0.05
SMARCD3-213ENST00000489503 LEMD3Q9Y2U8 911 aa15.35■□□□□ 0.05
SMARCD3-213ENST00000489503 ZBTB12Q9Y330 459 aaPredicted RBP15.35■□□□□ 0.05
SMARCD3-213ENST00000489503 TOMM70O94826 608 aa15.34■□□□□ 0.05
SMARCD3-213ENST00000489503 EPS15P42566 896 aa15.34■□□□□ 0.05
SMARCD3-213ENST00000489503 PTPN12Q05209 780 aaKnown RBP15.34■□□□□ 0.05
SMARCD3-213ENST00000489503 EAPPQ56P03 285 aaPredicted RBP15.34■□□□□ 0.05
SMARCD3-213ENST00000489503 RIPOR2Q9Y4F9 1068 aa15.34■□□□□ 0.05
SMARCD3-213ENST00000489503 IRS2Q9Y4H2 1338 aa15.34■□□□□ 0.05
SMARCD3-213ENST00000489503 ADAMTSL1Q8N6G6 1762 aa15.34■□□□□ 0.05
SMARCD3-213ENST00000489503 IQCA1LA6NCM1 817 aa15.33■□□□□ 0.04
SMARCD3-213ENST00000489503 EPHX2P34913 555 aa15.33■□□□□ 0.04
SMARCD3-213ENST00000489503 METTL24Q5JXM2 366 aa15.33■□□□□ 0.04
SMARCD3-213ENST00000489503 FBXW7Q969H0 707 aa15.33■□□□□ 0.04
SMARCD3-213ENST00000489503 GNAI2P04899 355 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms