RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 TSR2Q969E8 191 aaKnown RBP17.26■□□□□ 0.35
LINC00173-204ENST00000489452 BEGAINQ9BUH8 593 aa17.26■□□□□ 0.35
LINC00173-204ENST00000489452 CWC25Q9NXE8 425 aaPredicted RBP17.26■□□□□ 0.35
LINC00173-204ENST00000489452 DDX58O95786 925 aaKnown RBP17.25■□□□□ 0.35
LINC00173-204ENST00000489452 HSP90B1P14625 803 aaKnown RBP17.25■□□□□ 0.35
LINC00173-204ENST00000489452 SAPCD2Q86UD0 394 aa17.25■□□□□ 0.35
LINC00173-204ENST00000489452 CCDC191Q8NCU4 936 aa17.25■□□□□ 0.35
LINC00173-204ENST00000489452 MAP3K2Q9Y2U5 619 aa17.25■□□□□ 0.35
LINC00173-204ENST00000489452 DDX60Q8IY21 1712 aaKnown RBP17.24■□□□□ 0.35
LINC00173-204ENST00000489452 CDHR2Q9BYE9 1310 aa17.24■□□□□ 0.35
LINC00173-204ENST00000489452 COL4A1P02462 1669 aa17.24■□□□□ 0.35
LINC00173-204ENST00000489452 PDE8AO60658 829 aa17.24■□□□□ 0.35
LINC00173-204ENST00000489452 UFL1O94874 794 aa17.24■□□□□ 0.35
LINC00173-204ENST00000489452 EGFRP00533 1210 aa17.24■□□□□ 0.35
LINC00173-204ENST00000489452 PCCAP05165 728 aaPredicted RBP17.24■□□□□ 0.35
LINC00173-204ENST00000489452 CCDC152Q4G0S7 254 aa17.24■□□□□ 0.35
LINC00173-204ENST00000489452 DPF2Q92785 391 aa17.24■□□□□ 0.35
LINC00173-204ENST00000489452 METTL22Q9BUU2 404 aaPredicted RBP17.24■□□□□ 0.35
LINC00173-204ENST00000489452 TSKSQ9UJT2 592 aa17.24■□□□□ 0.35
LINC00173-204ENST00000489452 DUOX1Q9NRD9 1551 aa17.23■□□□□ 0.35
LINC00173-204ENST00000489452 GGA1Q9UJY5 639 aa17.23■□□□□ 0.35
LINC00173-204ENST00000489452 PI4KAP2A4QPH2 592 aa17.22■□□□□ 0.35
LINC00173-204ENST00000489452 PI4KAP1Q8N8J0 262 aa17.22■□□□□ 0.35
LINC00173-204ENST00000489452 CHMP4AQ9BY43 222 aa17.22■□□□□ 0.35
LINC00173-204ENST00000489452 RTL9Q8NET4 1388 aa17.22■□□□□ 0.35
LINC00173-204ENST00000489452 TRPM7Q96QT4 1865 aa17.21■□□□□ 0.35
LINC00173-204ENST00000489452 MAP2K2P36507 400 aa17.21■□□□□ 0.35
LINC00173-204ENST00000489452 KSR2Q6VAB6 950 aa17.21■□□□□ 0.35
LINC00173-204ENST00000489452 KRT26Q7Z3Y9 468 aa17.21■□□□□ 0.35
LINC00173-204ENST00000489452 ANKRD18AQ8IVF6 992 aa17.21■□□□□ 0.35
LINC00173-204ENST00000489452 PODXL2Q9NZ53 605 aa17.21■□□□□ 0.35
LINC00173-204ENST00000489452 WTIPA6NIX2 430 aaPredicted RBP17.2■□□□□ 0.34
LINC00173-204ENST00000489452 IGKV5-2P06315 115 aa17.2■□□□□ 0.34
LINC00173-204ENST00000489452 RPS12P25398 132 aaKnown RBP17.2■□□□□ 0.34
LINC00173-204ENST00000489452 G2E3Q7L622 706 aa17.2■□□□□ 0.34
LINC00173-204ENST00000489452 DCPSQ96C86 337 aaKnown RBP17.2■□□□□ 0.34
LINC00173-204ENST00000489452 STK31Q9BXU1 1019 aa17.2■□□□□ 0.34
LINC00173-204ENST00000489452 SALL2Q9Y467 1007 aaPredicted RBP17.2■□□□□ 0.34
LINC00173-204ENST00000489452 ADM5C9JUS6 153 aa17.19■□□□□ 0.34
LINC00173-204ENST00000489452 VIL1P09327 827 aaKnown RBP17.19■□□□□ 0.34
LINC00173-204ENST00000489452 HUNKP57058 714 aa17.19■□□□□ 0.34
LINC00173-204ENST00000489452 CWF19L2Q2TBE0 894 aaKnown RBP17.19■□□□□ 0.34
LINC00173-204ENST00000489452 SLC4A2P04920 1241 aa17.18■□□□□ 0.34
LINC00173-204ENST00000489452 NEXNQ0ZGT2 675 aa17.18■□□□□ 0.34
LINC00173-204ENST00000489452 KIF4BQ2VIQ3 1234 aa17.18■□□□□ 0.34
LINC00173-204ENST00000489452 WWC1Q8IX03 1113 aa17.18■□□□□ 0.34
LINC00173-204ENST00000489452 ZIC5Q96T25 663 aa17.18■□□□□ 0.34
LINC00173-204ENST00000489452 LRRC37AA6NMS7 1700 aa17.18■□□□□ 0.34
LINC00173-204ENST00000489452 ASTN2O75129 1339 aaPredicted RBP17.18■□□□□ 0.34
LINC00173-204ENST00000489452 CTSWP56202 376 aa17.17■□□□□ 0.34
LINC00173-204ENST00000489452 TWISTNBQ3B726 338 aaPredicted RBP17.17■□□□□ 0.34
LINC00173-204ENST00000489452 TTLL11Q8NHH1 800 aa17.17■□□□□ 0.34
LINC00173-204ENST00000489452 HHIPL1Q96JK4 782 aa17.17■□□□□ 0.34
LINC00173-204ENST00000489452 GREM2Q9H772 168 aa17.17■□□□□ 0.34
LINC00173-204ENST00000489452 XDHP47989 1333 aa17.17■□□□□ 0.34
LINC00173-204ENST00000489452 ATP2B4P23634 1241 aa17.16■□□□□ 0.34
LINC00173-204ENST00000489452 RSBN1LQ6PCB5 846 aaPredicted RBP17.16■□□□□ 0.34
LINC00173-204ENST00000489452 C2orf69Q8N8R5 385 aa17.16■□□□□ 0.34
LINC00173-204ENST00000489452 ABHD8Q96I13 439 aa17.16■□□□□ 0.34
LINC00173-204ENST00000489452 CDC5LQ99459 802 aaKnown RBP17.16■□□□□ 0.34
LINC00173-204ENST00000489452 GBA2Q9HCG7 927 aaPredicted RBP17.16■□□□□ 0.34
LINC00173-204ENST00000489452 POLR2AP24928 1970 aaKnown RBP17.15■□□□□ 0.34
LINC00173-204ENST00000489452 NEURL1BA8MQ27 555 aa17.15■□□□□ 0.34
LINC00173-204ENST00000489452 SCARF1Q14162 830 aa17.15■□□□□ 0.34
LINC00173-204ENST00000489452 UBE3BQ7Z3V4 1068 aa17.15■□□□□ 0.34
LINC00173-204ENST00000489452 SULF1Q8IWU6 871 aa17.15■□□□□ 0.34
LINC00173-204ENST00000489452 GGA3Q9NZ52 723 aa17.15■□□□□ 0.34
LINC00173-204ENST00000489452 MINPP1Q9UNW1 487 aa17.15■□□□□ 0.34
LINC00173-204ENST00000489452 CCDC27Q2M243 656 aa17.14■□□□□ 0.33
LINC00173-204ENST00000489452 FBXW7Q969H0 707 aa17.14■□□□□ 0.33
LINC00173-204ENST00000489452 MRS2Q9HD23 443 aa17.14■□□□□ 0.33
LINC00173-204ENST00000489452 USP17L3A6NCW0 530 aa17.13■□□□□ 0.33
LINC00173-204ENST00000489452 USP17L4A6NCW7 530 aa17.13■□□□□ 0.33
LINC00173-204ENST00000489452 H7C1W4 665 aa17.13■□□□□ 0.33
LINC00173-204ENST00000489452 ZNF157P51786 506 aaPredicted RBP17.13■□□□□ 0.33
LINC00173-204ENST00000489452 BRPF1P55201 1214 aaPredicted RBP17.13■□□□□ 0.33
LINC00173-204ENST00000489452 NOGQ13253 232 aa17.13■□□□□ 0.33
LINC00173-204ENST00000489452 ANGEL2Q5VTE6 544 aaKnown RBP17.13■□□□□ 0.33
LINC00173-204ENST00000489452 RGMBQ6NW40 437 aa17.13■□□□□ 0.33
LINC00173-204ENST00000489452 USP17L1Q7RTZ2 530 aa17.13■□□□□ 0.33
LINC00173-204ENST00000489452 AGBL3Q8NEM8 1001 aa17.13■□□□□ 0.33
LINC00173-204ENST00000489452 MXD3Q9BW11 206 aa17.13■□□□□ 0.33
LINC00173-204ENST00000489452 BSDC1Q9NW68 430 aaPredicted RBP17.13■□□□□ 0.33
LINC00173-204ENST00000489452 SCAF8Q9UPN6 1271 aaKnown RBP17.13■□□□□ 0.33
LINC00173-204ENST00000489452 SCN9AQ15858 1988 aa17.13■□□□□ 0.33
LINC00173-204ENST00000489452 CCDC85CA6NKD9 419 aa17.12■□□□□ 0.33
LINC00173-204ENST00000489452 CA12O43570 354 aa17.12■□□□□ 0.33
LINC00173-204ENST00000489452 USP17L8P0C7I0 530 aa17.12■□□□□ 0.33
LINC00173-204ENST00000489452 ZNF280AP59817 542 aaPredicted RBP17.12■□□□□ 0.33
LINC00173-204ENST00000489452 CCT4P50991 539 aaKnown RBP17.11■□□□□ 0.33
LINC00173-204ENST00000489452 FLIIQ13045 1269 aa17.11■□□□□ 0.33
LINC00173-204ENST00000489452 FKBP5Q13451 457 aaPredicted RBP17.11■□□□□ 0.33
LINC00173-204ENST00000489452 GCKRQ14397 625 aa17.11■□□□□ 0.33
LINC00173-204ENST00000489452 PODNQ7Z5L7 613 aa17.11■□□□□ 0.33
LINC00173-204ENST00000489452 CDCA5Q96FF9 252 aa17.11■□□□□ 0.33
LINC00173-204ENST00000489452 GMLQ99445 158 aa17.11■□□□□ 0.33
LINC00173-204ENST00000489452 MYOZ2Q9NPC6 264 aa17.11■□□□□ 0.33
LINC00173-204ENST00000489452 IGHMBP2P38935 993 aaKnown RBP17.1■□□□□ 0.33
LINC00173-204ENST00000489452 KIF23Q02241 960 aaPredicted RBP17.1■□□□□ 0.33
LINC00173-204ENST00000489452 TXNRD3Q86VQ6 643 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms