RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 TBC1D16Q8TBP0 767 aa19.84■□□□□ 0.77
LMX1A-204ENST00000489443 GPR101Q96P66 508 aaPredicted RBP19.84■□□□□ 0.77
LMX1A-204ENST00000489443 MPHOSPH8Q99549 860 aa19.84■□□□□ 0.77
LMX1A-204ENST00000489443 KAZALD1Q96I82 304 aa19.83■□□□□ 0.77
LMX1A-204ENST00000489443 PODXL2Q9NZ53 605 aa19.83■□□□□ 0.77
LMX1A-204ENST00000489443 GGA1Q9UJY5 639 aa19.83■□□□□ 0.77
LMX1A-204ENST00000489443 MINPP1Q9UNW1 487 aa19.83■□□□□ 0.77
LMX1A-204ENST00000489443 GJA3Q9Y6H8 435 aa19.83■□□□□ 0.77
LMX1A-204ENST00000489443 XDHP47989 1333 aa19.82■□□□□ 0.76
LMX1A-204ENST00000489443 CCDC57Q2TAC2 916 aa19.82■□□□□ 0.76
LMX1A-204ENST00000489443 EYA3Q99504 573 aa19.82■□□□□ 0.76
LMX1A-204ENST00000489443 BICC1Q9H694 974 aaKnown RBP19.82■□□□□ 0.76
LMX1A-204ENST00000489443 ZNRF3Q9ULT6 936 aa19.82■□□□□ 0.76
LMX1A-204ENST00000489443 POTECB2RU33 542 aa19.81■□□□□ 0.76
LMX1A-204ENST00000489443 TAF7LQ5H9L4 462 aa19.81■□□□□ 0.76
LMX1A-204ENST00000489443 LTBP1Q14766 1721 aa19.81■□□□□ 0.76
LMX1A-204ENST00000489443 WDR90Q96KV7 1748 aa19.81■□□□□ 0.76
LMX1A-204ENST00000489443 TOMM70O94826 608 aa19.8■□□□□ 0.76
LMX1A-204ENST00000489443 TRIM27P14373 513 aa19.8■□□□□ 0.76
LMX1A-204ENST00000489443 ATF7IPQ6VMQ6 1270 aa19.8■□□□□ 0.76
LMX1A-204ENST00000489443 GPC2Q8N158 579 aa19.8■□□□□ 0.76
LMX1A-204ENST00000489443 CLUAP1Q96AJ1 413 aa19.8■□□□□ 0.76
LMX1A-204ENST00000489443 ZNF594Q96JF6 807 aaPredicted RBP19.8■□□□□ 0.76
LMX1A-204ENST00000489443 ZC3H12CQ9C0D7 883 aaKnown RBP19.8■□□□□ 0.76
LMX1A-204ENST00000489443 TNNQ9UQP3 1299 aa19.8■□□□□ 0.76
LMX1A-204ENST00000489443 WTIPA6NIX2 430 aaPredicted RBP19.79■□□□□ 0.76
LMX1A-204ENST00000489443 ATP2B4P23634 1241 aa19.79■□□□□ 0.76
LMX1A-204ENST00000489443 DOK7Q18PE1 504 aa19.79■□□□□ 0.76
LMX1A-204ENST00000489443 DBNDD1Q9H9R9 158 aa19.79■□□□□ 0.76
LMX1A-204ENST00000489443 G3V3G9 751 aa19.78■□□□□ 0.76
LMX1A-204ENST00000489443 RAD17O75943 681 aa19.78■□□□□ 0.76
LMX1A-204ENST00000489443 UBTFL1P0CB47 393 aaPredicted RBP19.78■□□□□ 0.76
LMX1A-204ENST00000489443 CXCL9Q07325 125 aa19.78■□□□□ 0.76
LMX1A-204ENST00000489443 DCAF8Q5TAQ9 597 aa19.78■□□□□ 0.76
LMX1A-204ENST00000489443 ZKSCAN2Q63HK3 967 aa19.78■□□□□ 0.76
LMX1A-204ENST00000489443 INTS3Q68E01 1043 aaKnown RBP19.78■□□□□ 0.76
LMX1A-204ENST00000489443 ANKRD44Q8N8A2 993 aa19.78■□□□□ 0.76
LMX1A-204ENST00000489443 L3MBTL3Q96JM7 780 aaPredicted RBP19.78■□□□□ 0.76
LMX1A-204ENST00000489443 ANKRD2Q9GZV1 360 aa19.78■□□□□ 0.76
LMX1A-204ENST00000489443 IQCA1LA6NCM1 817 aa19.77■□□□□ 0.76
LMX1A-204ENST00000489443 CHRNDQ07001 517 aa19.77■□□□□ 0.76
LMX1A-204ENST00000489443 LDHAL6AQ6ZMR3 332 aa19.77■□□□□ 0.76
LMX1A-204ENST00000489443 CNNM1Q9NRU3 951 aa19.77■□□□□ 0.76
LMX1A-204ENST00000489443 YDJCA8MPS7 323 aa19.76■□□□□ 0.75
LMX1A-204ENST00000489443 ECE2O60344 883 aa19.76■□□□□ 0.75
LMX1A-204ENST00000489443 RABL6Q3YEC7 729 aaPredicted RBP19.76■□□□□ 0.75
LMX1A-204ENST00000489443 CIAPIN1Q6FI81 312 aa19.76■□□□□ 0.75
LMX1A-204ENST00000489443 HELBQ8NG08 1087 aaPredicted RBP19.76■□□□□ 0.75
LMX1A-204ENST00000489443 RBM46Q8TBY0 533 aaKnown RBP19.76■□□□□ 0.75
LMX1A-204ENST00000489443 HACL1Q9UJ83 578 aa19.76■□□□□ 0.75
LMX1A-204ENST00000489443 SCN4AP35499 1836 aa19.75■□□□□ 0.75
LMX1A-204ENST00000489443 KCNJ4P48050 445 aa19.75■□□□□ 0.75
LMX1A-204ENST00000489443 TNIP1Q15025 636 aa19.75■□□□□ 0.75
LMX1A-204ENST00000489443 MEIS3Q99687 375 aa19.75■□□□□ 0.75
LMX1A-204ENST00000489443 LEMD3Q9Y2U8 911 aa19.75■□□□□ 0.75
LMX1A-204ENST00000489443 PLIN1O60240 522 aa19.74■□□□□ 0.75
LMX1A-204ENST00000489443 TAF5LO75529 589 aa19.74■□□□□ 0.75
LMX1A-204ENST00000489443 TAF1DQ9H5J8 278 aaPredicted RBP19.74■□□□□ 0.75
LMX1A-204ENST00000489443 KCNQ5Q9NR82 932 aa19.74■□□□□ 0.75
LMX1A-204ENST00000489443 ZNF804BA4D1E1 1349 aa19.74■□□□□ 0.75
LMX1A-204ENST00000489443 LMOD1P29536 600 aaPredicted RBP19.73■□□□□ 0.75
LMX1A-204ENST00000489443 YTHDC1Q96MU7 727 aaKnown RBP19.73■□□□□ 0.75
LMX1A-204ENST00000489443 PUS3Q9BZE2 481 aaKnown RBP19.73■□□□□ 0.75
LMX1A-204ENST00000489443 HDAC5Q9UQL6 1122 aa19.73■□□□□ 0.75
LMX1A-204ENST00000489443 LRRFIP2Q9Y608 721 aaKnown RBP19.73■□□□□ 0.75
LMX1A-204ENST00000489443 SNAP23O00161 211 aa19.72■□□□□ 0.75
LMX1A-204ENST00000489443 GNAI3P08754 354 aa19.72■□□□□ 0.75
LMX1A-204ENST00000489443 EPHX2P34913 555 aa19.72■□□□□ 0.75
LMX1A-204ENST00000489443 GMPSP49915 693 aaPredicted RBP19.72■□□□□ 0.75
LMX1A-204ENST00000489443 EAPPQ56P03 285 aaPredicted RBP19.72■□□□□ 0.75
LMX1A-204ENST00000489443 FTSJ3Q8IY81 847 aaKnown RBP19.72■□□□□ 0.75
LMX1A-204ENST00000489443 TMEM57Q8N5G2 664 aa19.72■□□□□ 0.75
LMX1A-204ENST00000489443 KLHDC4Q8TBB5 520 aa19.72■□□□□ 0.75
LMX1A-204ENST00000489443 MED23Q9ULK4 1368 aa19.71■□□□□ 0.75
LMX1A-204ENST00000489443 PSMD14O00487 310 aa19.71■□□□□ 0.75
LMX1A-204ENST00000489443 EPS15P42566 896 aa19.71■□□□□ 0.75
LMX1A-204ENST00000489443 SCNN1DP51172 638 aa19.71■□□□□ 0.75
LMX1A-204ENST00000489443 DZIP1LQ8IYY4 767 aaKnown RBP19.71■□□□□ 0.75
LMX1A-204ENST00000489443 SMC1BQ8NDV3 1235 aa19.71■□□□□ 0.75
LMX1A-204ENST00000489443 POTEIP0CG38 1075 aa19.7■□□□□ 0.74
LMX1A-204ENST00000489443 POTEJP0CG39 1038 aa19.7■□□□□ 0.74
LMX1A-204ENST00000489443 KLRK1P26718 216 aa19.7■□□□□ 0.74
LMX1A-204ENST00000489443 FSTL1Q12841 308 aa19.7■□□□□ 0.74
LMX1A-204ENST00000489443 TXNRD3Q86VQ6 643 aa19.7■□□□□ 0.74
LMX1A-204ENST00000489443 RCAN3Q9UKA8 241 aa19.7■□□□□ 0.74
LMX1A-204ENST00000489443 SCN9AQ15858 1988 aa19.7■□□□□ 0.74
LMX1A-204ENST00000489443 CEP350Q5VT06 3117 aa19.69■□□□□ 0.74
LMX1A-204ENST00000489443 LRRC24Q50LG9 513 aa19.69■□□□□ 0.74
LMX1A-204ENST00000489443 GPRC5DQ9NZD1 345 aa19.69■□□□□ 0.74
LMX1A-204ENST00000489443 CLEC11AQ9Y240 323 aa19.69■□□□□ 0.74
LMX1A-204ENST00000489443 ZBTB12Q9Y330 459 aaPredicted RBP19.69■□□□□ 0.74
LMX1A-204ENST00000489443 RIPOR2Q9Y4F9 1068 aa19.69■□□□□ 0.74
LMX1A-204ENST00000489443 A0A1B0GUL6 1792 aa19.69■□□□□ 0.74
LMX1A-204ENST00000489443 RLBP1P12271 317 aa19.68■□□□□ 0.74
LMX1A-204ENST00000489443 PODNQ7Z5L7 613 aa19.68■□□□□ 0.74
LMX1A-204ENST00000489443 PNMA8AQ86V59 439 aaPredicted RBP19.68■□□□□ 0.74
LMX1A-204ENST00000489443 RFX5P48382 616 aaPredicted RBP19.67■□□□□ 0.74
LMX1A-204ENST00000489443 METTL24Q5JXM2 366 aa19.67■□□□□ 0.74
LMX1A-204ENST00000489443 CHADLQ6NUI6 762 aa19.67■□□□□ 0.74
LMX1A-204ENST00000489443 LDHDQ86WU2 507 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms