RNA–Protein interactions for RNA: ENST00000489337.5

SMTN-218, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 3,560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-218ENST00000489337 CLASRPQ8N2M8 674 aaKnown RBP13.84□□□□□ -0.19
SMTN-218ENST00000489337 NEURL1BA8MQ27 555 aa13.84□□□□□ -0.19
SMTN-218ENST00000489337 KIF6Q6ZMV9 814 aa13.84□□□□□ -0.19
SMTN-218ENST00000489337 CHMP4CQ96CF2 233 aa13.84□□□□□ -0.19
SMTN-218ENST00000489337 STRCQ7RTU9 1775 aa13.84□□□□□ -0.19
SMTN-218ENST00000489337 STARD3NLO95772 234 aa13.83□□□□□ -0.19
SMTN-218ENST00000489337 LINS1Q8NG48 757 aa13.83□□□□□ -0.19
SMTN-218ENST00000489337 NWD1Q149M9 1564 aa13.83□□□□□ -0.2
SMTN-218ENST00000489337 VPS37CA5D8V6 355 aaPredicted RBP13.83□□□□□ -0.2
SMTN-218ENST00000489337 GCKRQ14397 625 aa13.83□□□□□ -0.2
SMTN-218ENST00000489337 MAP3K11Q16584 847 aa13.83□□□□□ -0.2
SMTN-218ENST00000489337 PUS3Q9BZE2 481 aaKnown RBP13.83□□□□□ -0.2
SMTN-218ENST00000489337 TCEANC2Q96MN5 208 aa13.83□□□□□ -0.2
SMTN-218ENST00000489337 JAG2Q9Y219 1238 aa13.83□□□□□ -0.2
SMTN-218ENST00000489337 CEP135Q66GS9 1140 aa13.82□□□□□ -0.2
SMTN-218ENST00000489337 CKAP2LQ8IYA6 745 aa13.82□□□□□ -0.2
SMTN-218ENST00000489337 ZNF397Q8NF99 534 aaPredicted RBP13.82□□□□□ -0.2
SMTN-218ENST00000489337 CALCOCO1Q9P1Z2 691 aa13.82□□□□□ -0.2
SMTN-218ENST00000489337 TYRO3Q06418 890 aa13.82□□□□□ -0.2
SMTN-218ENST00000489337 ZSCAN25Q6NSZ9 544 aa13.82□□□□□ -0.2
SMTN-218ENST00000489337 TRERF1Q96PN7 1200 aa13.82□□□□□ -0.2
SMTN-218ENST00000489337 SLC4A9Q96Q91 983 aa13.82□□□□□ -0.2
SMTN-218ENST00000489337 NUP62CLQ9H1M0 184 aa13.82□□□□□ -0.2
SMTN-218ENST00000489337 CPA1P15085 419 aa13.82□□□□□ -0.2
SMTN-218ENST00000489337 FKBP4Q02790 459 aaKnown RBP eCLIP13.81□□□□□ -0.2
SMTN-218ENST00000489337 KMT5BQ4FZB7 885 aa13.81□□□□□ -0.2
SMTN-218ENST00000489337 DZIP3Q86Y13 1208 aaKnown RBP13.81□□□□□ -0.2
SMTN-218ENST00000489337 LIMCH1Q9UPQ0 1083 aa13.81□□□□□ -0.2
SMTN-218ENST00000489337 AK2P54819 239 aa13.81□□□□□ -0.2
SMTN-218ENST00000489337 DDX46Q7L014 1031 aaKnown RBP13.81□□□□□ -0.2
SMTN-218ENST00000489337 ZNF215Q9UL58 517 aaPredicted RBP13.81□□□□□ -0.2
SMTN-218ENST00000489337 COL5A2P05997 1499 aaPredicted RBP13.81□□□□□ -0.2
SMTN-218ENST00000489337 GOLGA6L4A6NEF3 574 aa13.81□□□□□ -0.2
SMTN-218ENST00000489337 TFCP2Q12800 502 aa13.81□□□□□ -0.2
SMTN-218ENST00000489337 LRRC24Q50LG9 513 aa13.81□□□□□ -0.2
SMTN-218ENST00000489337 HSPA4P34932 840 aa13.8□□□□□ -0.2
SMTN-218ENST00000489337 ANO6Q4KMQ2 910 aa13.8□□□□□ -0.2
SMTN-218ENST00000489337 METTL22Q9BUU2 404 aaPredicted RBP13.8□□□□□ -0.2
SMTN-218ENST00000489337 CHMP4AQ9BY43 222 aa13.8□□□□□ -0.2
SMTN-218ENST00000489337 CCDC83Q8IWF9 413 aa13.8□□□□□ -0.2
SMTN-218ENST00000489337 TNMDQ9H2S6 317 aa13.8□□□□□ -0.2
SMTN-218ENST00000489337 MRVI1Q9Y6F6 885 aa13.8□□□□□ -0.2
SMTN-218ENST00000489337 GJB2P29033 226 aa13.8□□□□□ -0.2
SMTN-218ENST00000489337 CBX8Q9HC52 389 aa13.8□□□□□ -0.2
SMTN-218ENST00000489337 CLIP2Q9UDT6 1046 aa13.8□□□□□ -0.2
SMTN-218ENST00000489337 CACTINQ8WUQ7 758 aaKnown RBP13.79□□□□□ -0.2
SMTN-218ENST00000489337 IL25Q9H293 177 aa13.79□□□□□ -0.2
SMTN-218ENST00000489337 CWC25Q9NXE8 425 aaPredicted RBP13.79□□□□□ -0.2
SMTN-218ENST00000489337 FSD1Q9BTV5 496 aa13.79□□□□□ -0.2
SMTN-218ENST00000489337 ST7Q9NRC1 585 aa13.79□□□□□ -0.2
SMTN-218ENST00000489337 SRP68Q9UHB9 627 aaKnown RBP13.79□□□□□ -0.2
SMTN-218ENST00000489337 ZNF75DP51815 510 aa13.78□□□□□ -0.2
SMTN-218ENST00000489337 PTPN14Q15678 1187 aa13.78□□□□□ -0.2
SMTN-218ENST00000489337 RUFY3Q7L099 469 aa13.78□□□□□ -0.2
SMTN-218ENST00000489337 EAF2Q96CJ1 260 aaPredicted RBP13.78□□□□□ -0.2
SMTN-218ENST00000489337 KAZALD1Q96I82 304 aa13.78□□□□□ -0.2
SMTN-218ENST00000489337 CNNM1Q9NRU3 951 aa13.78□□□□□ -0.2
SMTN-218ENST00000489337 ELF2Q15723 593 aa13.78□□□□□ -0.2
SMTN-218ENST00000489337 FBXO38Q6PIJ6 1188 aa13.78□□□□□ -0.2
SMTN-218ENST00000489337 CNTROBQ8N137 903 aa13.78□□□□□ -0.2
SMTN-218ENST00000489337 LOC102724428A0A0B4J2F2 783 aa13.78□□□□□ -0.2
SMTN-218ENST00000489337 TAF5LO75529 589 aa13.78□□□□□ -0.2
SMTN-218ENST00000489337 TRIM37O94972 964 aa13.78□□□□□ -0.2
SMTN-218ENST00000489337 LIG1P18858 919 aa13.78□□□□□ -0.2
SMTN-218ENST00000489337 SIK1P57059 783 aa13.78□□□□□ -0.2
SMTN-218ENST00000489337 CCDC57Q2TAC2 916 aa13.78□□□□□ -0.2
SMTN-218ENST00000489337 PI16Q6UXB8 463 aa13.78□□□□□ -0.2
SMTN-218ENST00000489337 FERMT3Q86UX7 667 aa13.78□□□□□ -0.2
SMTN-218ENST00000489337 RUFY2Q8WXA3 655 aa13.78□□□□□ -0.2
SMTN-218ENST00000489337 GPATCH3Q96I76 525 aa13.78□□□□□ -0.2
SMTN-218ENST00000489337 ZNF219Q9P2Y4 722 aaPredicted RBP13.78□□□□□ -0.2
SMTN-218ENST00000489337 MTMR6Q9Y217 621 aa13.78□□□□□ -0.2
SMTN-218ENST00000489337 NIP7Q9Y221 180 aaKnown RBP eCLIP13.78□□□□□ -0.2
SMTN-218ENST00000489337 DBNDD2Q9BQY9 259 aa13.77□□□□□ -0.2
SMTN-218ENST00000489337 SNX14Q9Y5W7 946 aa13.77□□□□□ -0.2
SMTN-218ENST00000489337 HEG1Q9ULI3 1381 aa13.77□□□□□ -0.2
SMTN-218ENST00000489337 ERVV-2B6SEH9 535 aa13.77□□□□□ -0.21
SMTN-218ENST00000489337 KRT85P78386 507 aa13.77□□□□□ -0.21
SMTN-218ENST00000489337 SLC4A8Q2Y0W8 1093 aa13.77□□□□□ -0.21
SMTN-218ENST00000489337 CERKQ8TCT0 537 aa13.77□□□□□ -0.21
SMTN-218ENST00000489337 KIF1BPQ96EK5 621 aa13.77□□□□□ -0.21
SMTN-218ENST00000489337 QTRT2Q9H974 415 aaKnown RBP13.77□□□□□ -0.21
SMTN-218ENST00000489337 DACT1Q9NYF0 836 aa13.77□□□□□ -0.21
SMTN-218ENST00000489337 AFF2P51816 1311 aa13.77□□□□□ -0.21
SMTN-218ENST00000489337 GNPATO15228 680 aa13.77□□□□□ -0.21
SMTN-218ENST00000489337 FOSBP53539 338 aa13.77□□□□□ -0.21
SMTN-218ENST00000489337 HSP90AB4PQ58FF6 505 aa13.77□□□□□ -0.21
SMTN-218ENST00000489337 CASTP20810 708 aaKnown RBP13.76□□□□□ -0.21
SMTN-218ENST00000489337 ZNF165P49910 485 aa13.76□□□□□ -0.21
SMTN-218ENST00000489337 TTC6Q86TZ1 520 aa13.76□□□□□ -0.21
SMTN-218ENST00000489337 TRMT1Q9NXH9 659 aaKnown RBP13.76□□□□□ -0.21
SMTN-218ENST00000489337 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.76□□□□□ -0.21
SMTN-218ENST00000489337 LARGE1O95461 756 aa13.76□□□□□ -0.21
SMTN-218ENST00000489337 CRKLP46109 303 aaKnown RBP13.76□□□□□ -0.21
SMTN-218ENST00000489337 FAM173BQ6P4H8 233 aa13.76□□□□□ -0.21
SMTN-218ENST00000489337 CCDC129Q6ZRS4 1044 aa13.76□□□□□ -0.21
SMTN-218ENST00000489337 RASEFQ8IZ41 740 aa13.76□□□□□ -0.21
SMTN-218ENST00000489337 NOL10Q9BSC4 688 aaKnown RBP13.76□□□□□ -0.21
SMTN-218ENST00000489337 RBM6P78332 1123 aaKnown RBP13.76□□□□□ -0.21
SMTN-218ENST00000489337 ITPK1Q13572 414 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms