RNA–Protein interactions for RNA: ENST00000489215.5

PTPN18-213, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 460 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-213ENST00000489215 ATP2B4P23634 1241 aa30.34■■■□□ 2.45
PTPN18-213ENST00000489215 CXCL9Q07325 125 aa30.34■■■□□ 2.45
PTPN18-213ENST00000489215 CHADLQ6NUI6 762 aa30.34■■■□□ 2.45
PTPN18-213ENST00000489215 LDHDQ86WU2 507 aa30.34■■■□□ 2.45
PTPN18-213ENST00000489215 MPHOSPH8Q99549 860 aa30.34■■■□□ 2.45
PTPN18-213ENST00000489215 UFL1O94874 794 aa30.33■■■□□ 2.45
PTPN18-213ENST00000489215 BRPF1P55201 1214 aaPredicted RBP30.33■■■□□ 2.45
PTPN18-213ENST00000489215 LTBP1Q14766 1721 aa30.33■■■□□ 2.45
PTPN18-213ENST00000489215 COL4A1P02462 1669 aa30.33■■■□□ 2.45
PTPN18-213ENST00000489215 G3V3G9 751 aa30.32■■■□□ 2.44
PTPN18-213ENST00000489215 HNRNPUQ00839 825 aaKnown RBP eCLIP30.32■■■□□ 2.44
PTPN18-213ENST00000489215 IFIT5Q13325 482 aaKnown RBP30.32■■■□□ 2.44
PTPN18-213ENST00000489215 DCAF8Q5TAQ9 597 aa30.32■■■□□ 2.44
PTPN18-213ENST00000489215 RIMBP2O15034 1052 aa30.31■■■□□ 2.44
PTPN18-213ENST00000489215 FOXO4P98177 505 aa30.31■■■□□ 2.44
PTPN18-213ENST00000489215 BCL2L13Q9BXK5 485 aa30.31■■■□□ 2.44
PTPN18-213ENST00000489215 ANKRD2Q9GZV1 360 aa30.31■■■□□ 2.44
PTPN18-213ENST00000489215 MINPP1Q9UNW1 487 aa30.31■■■□□ 2.44
PTPN18-213ENST00000489215 FAM161AQ3B820 660 aa30.3■■■□□ 2.44
PTPN18-213ENST00000489215 EAPPQ56P03 285 aaPredicted RBP30.29■■■□□ 2.44
PTPN18-213ENST00000489215 UTYO14607 1347 aa30.28■■■□□ 2.44
PTPN18-213ENST00000489215 SCNN1DP51172 638 aa30.28■■■□□ 2.44
PTPN18-213ENST00000489215 CCDC57Q2TAC2 916 aa30.28■■■□□ 2.44
PTPN18-213ENST00000489215 CLEC11AQ9Y240 323 aa30.28■■■□□ 2.44
PTPN18-213ENST00000489215 LEMD3Q9Y2U8 911 aa30.28■■■□□ 2.44
PTPN18-213ENST00000489215 CHMP3Q9Y3E7 222 aa30.28■■■□□ 2.44
PTPN18-213ENST00000489215 RAD17O75943 681 aa30.27■■■□□ 2.44
PTPN18-213ENST00000489215 LMBR1LQ6UX01 489 aa30.27■■■□□ 2.44
PTPN18-213ENST00000489215 USP50Q70EL3 339 aaPredicted RBP30.27■■■□□ 2.44
PTPN18-213ENST00000489215 API5Q9BZZ5 524 aaKnown RBP30.27■■■□□ 2.44
PTPN18-213ENST00000489215 DBNDD1Q9H9R9 158 aa30.27■■■□□ 2.44
PTPN18-213ENST00000489215 ECE2O60344 883 aa30.26■■■□□ 2.43
PTPN18-213ENST00000489215 GPRC5DQ9NZD1 345 aa30.26■■■□□ 2.43
PTPN18-213ENST00000489215 SPEF2Q9C093 1822 aa30.25■■■□□ 2.43
PTPN18-213ENST00000489215 YDJCA8MPS7 323 aa30.25■■■□□ 2.43
PTPN18-213ENST00000489215 CCT4P50991 539 aaKnown RBP30.25■■■□□ 2.43
PTPN18-213ENST00000489215 KIF16BQ96L93 1317 aa30.24■■■□□ 2.43
PTPN18-213ENST00000489215 RARSP54136 660 aaKnown RBP30.24■■■□□ 2.43
PTPN18-213ENST00000489215 TAF7LQ5H9L4 462 aa30.24■■■□□ 2.43
PTPN18-213ENST00000489215 DPF2Q92785 391 aa30.24■■■□□ 2.43
PTPN18-213ENST00000489215 ADARB2Q9NS39 739 aaKnown RBP30.24■■■□□ 2.43
PTPN18-213ENST00000489215 NBPF7P0C2Y1 421 aaPredicted RBP30.23■■■□□ 2.43
PTPN18-213ENST00000489215 RPS12P25398 132 aaKnown RBP30.23■■■□□ 2.43
PTPN18-213ENST00000489215 EPS15P42566 896 aa30.23■■■□□ 2.43
PTPN18-213ENST00000489215 DOK7Q18PE1 504 aa30.23■■■□□ 2.43
PTPN18-213ENST00000489215 PODNQ7Z5L7 613 aa30.23■■■□□ 2.43
PTPN18-213ENST00000489215 ARHGAP45Q92619 1136 aa30.23■■■□□ 2.43
PTPN18-213ENST00000489215 NOB1Q9ULX3 412 aaKnown RBP30.23■■■□□ 2.43
PTPN18-213ENST00000489215 POTEIP0CG38 1075 aa30.22■■■□□ 2.43
PTPN18-213ENST00000489215 POTEJP0CG39 1038 aa30.22■■■□□ 2.43
PTPN18-213ENST00000489215 GMPSP49915 693 aaPredicted RBP30.22■■■□□ 2.43
PTPN18-213ENST00000489215 HDAC5Q9UQL6 1122 aa30.22■■■□□ 2.43
PTPN18-213ENST00000489215 MED23Q9ULK4 1368 aa30.22■■■□□ 2.43
PTPN18-213ENST00000489215 H7C1D1 291 aa30.21■■■□□ 2.43
PTPN18-213ENST00000489215 IPO8O15397 1037 aaKnown RBP30.2■■■□□ 2.43
PTPN18-213ENST00000489215 EPHA10Q5JZY3 1008 aa30.2■■■□□ 2.43
PTPN18-213ENST00000489215 SUCLG2Q96I99 432 aa30.2■■■□□ 2.43
PTPN18-213ENST00000489215 GPR101Q96P66 508 aaPredicted RBP30.2■■■□□ 2.43
PTPN18-213ENST00000489215 ADAMTSL1Q8N6G6 1762 aa30.19■■■□□ 2.42
PTPN18-213ENST00000489215 PSMD14O00487 310 aa30.19■■■□□ 2.42
PTPN18-213ENST00000489215 KCNJ4P48050 445 aa30.19■■■□□ 2.42
PTPN18-213ENST00000489215 CHRNDQ07001 517 aa30.19■■■□□ 2.42
PTPN18-213ENST00000489215 LDHAL6AQ6ZMR3 332 aa30.19■■■□□ 2.42
PTPN18-213ENST00000489215 USP44Q9H0E7 712 aa30.19■■■□□ 2.42
PTPN18-213ENST00000489215 CNOT7Q9UIV1 285 aaKnown RBP30.19■■■□□ 2.42
PTPN18-213ENST00000489215 ZNF804BA4D1E1 1349 aa30.19■■■□□ 2.42
PTPN18-213ENST00000489215 ZBED9Q6R2W3 1325 aa30.18■■■□□ 2.42
PTPN18-213ENST00000489215 VIL1P09327 827 aaKnown RBP30.17■■■□□ 2.42
PTPN18-213ENST00000489215 RABL6Q3YEC7 729 aaPredicted RBP30.17■■■□□ 2.42
PTPN18-213ENST00000489215 COA1Q9GZY4 146 aa30.17■■■□□ 2.42
PTPN18-213ENST00000489215 CNTROBQ8N137 903 aa30.16■■■□□ 2.42
PTPN18-213ENST00000489215 KAZALD1Q96I82 304 aa30.16■■■□□ 2.42
PTPN18-213ENST00000489215 CNNM1Q9NRU3 951 aa30.16■■■□□ 2.42
PTPN18-213ENST00000489215 ZC3H15Q8WU90 426 aaKnown RBP30.15■■■□□ 2.42
PTPN18-213ENST00000489215 BICC1Q9H694 974 aaKnown RBP30.15■■■□□ 2.42
PTPN18-213ENST00000489215 ITGBL1O95965 494 aaPredicted RBP30.14■■■□□ 2.42
PTPN18-213ENST00000489215 PASKQ96RG2 1323 aa30.14■■■□□ 2.42
PTPN18-213ENST00000489215 USP17L3A6NCW0 530 aa30.13■■■□□ 2.41
PTPN18-213ENST00000489215 USP17L4A6NCW7 530 aa30.13■■■□□ 2.41
PTPN18-213ENST00000489215 USP17L1Q7RTZ2 530 aa30.13■■■□□ 2.41
PTPN18-213ENST00000489215 DNAJC5GQ8N7S2 189 aa30.13■■■□□ 2.41
PTPN18-213ENST00000489215 AGBL3Q8NEM8 1001 aa30.13■■■□□ 2.41
PTPN18-213ENST00000489215 ZBTB12Q9Y330 459 aaPredicted RBP30.13■■■□□ 2.41
PTPN18-213ENST00000489215 MAP1SQ66K74 1059 aaPredicted RBP30.12■■■□□ 2.41
PTPN18-213ENST00000489215 MICALL2Q8IY33 904 aa30.12■■■□□ 2.41
PTPN18-213ENST00000489215 KCNQ5Q9NR82 932 aa30.12■■■□□ 2.41
PTPN18-213ENST00000489215 CREBZFQ9NS37 354 aa30.12■■■□□ 2.41
PTPN18-213ENST00000489215 PSME4Q14997 1843 aa30.11■■■□□ 2.41
PTPN18-213ENST00000489215 UBTFL1P0CB47 393 aaPredicted RBP30.11■■■□□ 2.41
PTPN18-213ENST00000489215 C15orf52Q6ZUT6 534 aaKnown RBP30.11■■■□□ 2.41
PTPN18-213ENST00000489215 ZNF594Q96JF6 807 aaPredicted RBP30.11■■■□□ 2.41
PTPN18-213ENST00000489215 ZNF609O15014 1411 aa30.11■■■□□ 2.41
PTPN18-213ENST00000489215 RSBN1LQ6PCB5 846 aaPredicted RBP30.1■■■□□ 2.41
PTPN18-213ENST00000489215 PGAP2Q9UHJ9 254 aa30.1■■■□□ 2.41
PTPN18-213ENST00000489215 SCN9AQ15858 1988 aa30.1■■■□□ 2.41
PTPN18-213ENST00000489215 MMP14P50281 582 aa30.09■■■□□ 2.41
PTPN18-213ENST00000489215 MROH5Q6ZUA9 1318 aa30.09■■■□□ 2.41
PTPN18-213ENST00000489215 MYO3BQ8WXR4 1341 aa30.08■■■□□ 2.41
PTPN18-213ENST00000489215 WTIPA6NIX2 430 aaPredicted RBP30.08■■■□□ 2.41
PTPN18-213ENST00000489215 TAF5LO75529 589 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms