RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 ANKRD18BA2A2Z9 1011 aa29.88■■■□□ 2.37
RHBDD3-205ENST00000488106 GPC2Q8N158 579 aa29.88■■■□□ 2.37
RHBDD3-205ENST00000488106 L3MBTL3Q96JM7 780 aaPredicted RBP29.88■■■□□ 2.37
RHBDD3-205ENST00000488106 BSDC1Q9NW68 430 aaPredicted RBP29.88■■■□□ 2.37
RHBDD3-205ENST00000488106 PODXL2Q9NZ53 605 aa29.88■■■□□ 2.37
RHBDD3-205ENST00000488106 GGA1Q9UJY5 639 aa29.88■■■□□ 2.37
RHBDD3-205ENST00000488106 XDHP47989 1333 aa29.88■■■□□ 2.37
RHBDD3-205ENST00000488106 RBM46Q8TBY0 533 aaKnown RBP29.87■■■□□ 2.37
RHBDD3-205ENST00000488106 EYA3Q99504 573 aa29.87■■■□□ 2.37
RHBDD3-205ENST00000488106 API5Q9BZZ5 524 aaKnown RBP29.87■■■□□ 2.37
RHBDD3-205ENST00000488106 ZNRF3Q9ULT6 936 aa29.87■■■□□ 2.37
RHBDD3-205ENST00000488106 IFIT5Q13325 482 aaKnown RBP29.86■■■□□ 2.37
RHBDD3-205ENST00000488106 MPHOSPH8Q99549 860 aa29.86■■■□□ 2.37
RHBDD3-205ENST00000488106 UTYO14607 1347 aa29.86■■■□□ 2.37
RHBDD3-205ENST00000488106 IQCA1LA6NCM1 817 aa29.85■■■□□ 2.37
RHBDD3-205ENST00000488106 DBNDD1Q9H9R9 158 aa29.85■■■□□ 2.37
RHBDD3-205ENST00000488106 MINPP1Q9UNW1 487 aa29.85■■■□□ 2.37
RHBDD3-205ENST00000488106 BCAR3O75815 825 aa29.84■■■□□ 2.37
RHBDD3-205ENST00000488106 KAZALD1Q96I82 304 aa29.84■■■□□ 2.37
RHBDD3-205ENST00000488106 ADAMTSL1Q8N6G6 1762 aa29.84■■■□□ 2.37
RHBDD3-205ENST00000488106 CEP350Q5VT06 3117 aa29.84■■■□□ 2.37
RHBDD3-205ENST00000488106 ZNF646O15015 1829 aaPredicted RBP29.83■■■□□ 2.37
RHBDD3-205ENST00000488106 CCT4P50991 539 aaKnown RBP29.83■■■□□ 2.37
RHBDD3-205ENST00000488106 YDJCA8MPS7 323 aa29.82■■■□□ 2.36
RHBDD3-205ENST00000488106 RAD17O75943 681 aa29.82■■■□□ 2.36
RHBDD3-205ENST00000488106 CXCL9Q07325 125 aa29.82■■■□□ 2.36
RHBDD3-205ENST00000488106 DOK7Q18PE1 504 aa29.82■■■□□ 2.36
RHBDD3-205ENST00000488106 CCDC57Q2TAC2 916 aa29.82■■■□□ 2.36
RHBDD3-205ENST00000488106 FRAT1Q92837 279 aaPredicted RBP29.82■■■□□ 2.36
RHBDD3-205ENST00000488106 USP44Q9H0E7 712 aa29.82■■■□□ 2.36
RHBDD3-205ENST00000488106 BICC1Q9H694 974 aaKnown RBP29.82■■■□□ 2.36
RHBDD3-205ENST00000488106 HACL1Q9UJ83 578 aa29.82■■■□□ 2.36
RHBDD3-205ENST00000488106 ATP2B4P23634 1241 aa29.81■■■□□ 2.36
RHBDD3-205ENST00000488106 TAF7LQ5H9L4 462 aa29.81■■■□□ 2.36
RHBDD3-205ENST00000488106 ZC3H12CQ9C0D7 883 aaKnown RBP29.81■■■□□ 2.36
RHBDD3-205ENST00000488106 ECE2O60344 883 aa29.8■■■□□ 2.36
RHBDD3-205ENST00000488106 CIAPIN1Q6FI81 312 aa29.8■■■□□ 2.36
RHBDD3-205ENST00000488106 SMC1BQ8NDV3 1235 aa29.8■■■□□ 2.36
RHBDD3-205ENST00000488106 ZNF594Q96JF6 807 aaPredicted RBP29.8■■■□□ 2.36
RHBDD3-205ENST00000488106 TAF1DQ9H5J8 278 aaPredicted RBP29.8■■■□□ 2.36
RHBDD3-205ENST00000488106 WTIPA6NIX2 430 aaPredicted RBP29.79■■■□□ 2.36
RHBDD3-205ENST00000488106 LMOD1P29536 600 aaPredicted RBP29.79■■■□□ 2.36
RHBDD3-205ENST00000488106 G3V3G9 751 aa29.78■■■□□ 2.36
RHBDD3-205ENST00000488106 POTEIP0CG38 1075 aa29.78■■■□□ 2.36
RHBDD3-205ENST00000488106 POTEJP0CG39 1038 aa29.78■■■□□ 2.36
RHBDD3-205ENST00000488106 EPHX2P34913 555 aa29.78■■■□□ 2.36
RHBDD3-205ENST00000488106 EAPPQ56P03 285 aaPredicted RBP29.78■■■□□ 2.36
RHBDD3-205ENST00000488106 DCAF8Q5TAQ9 597 aa29.78■■■□□ 2.36
RHBDD3-205ENST00000488106 ANKRD44Q8N8A2 993 aa29.78■■■□□ 2.36
RHBDD3-205ENST00000488106 ARHGAP45Q92619 1136 aa29.78■■■□□ 2.36
RHBDD3-205ENST00000488106 SCNN1DP51172 638 aa29.77■■■□□ 2.36
RHBDD3-205ENST00000488106 CHRNDQ07001 517 aa29.77■■■□□ 2.36
RHBDD3-205ENST00000488106 FSTL1Q12841 308 aa29.77■■■□□ 2.36
RHBDD3-205ENST00000488106 ANKRD2Q9GZV1 360 aa29.77■■■□□ 2.36
RHBDD3-205ENST00000488106 TNNQ9UQP3 1299 aa29.77■■■□□ 2.36
RHBDD3-205ENST00000488106 MED23Q9ULK4 1368 aa29.77■■■□□ 2.36
RHBDD3-205ENST00000488106 IPO8O15397 1037 aaKnown RBP29.76■■■□□ 2.35
RHBDD3-205ENST00000488106 TRIM27P14373 513 aa29.76■■■□□ 2.35
RHBDD3-205ENST00000488106 HSPA6P17066 643 aa29.76■■■□□ 2.35
RHBDD3-205ENST00000488106 TNIP1Q15025 636 aa29.76■■■□□ 2.35
RHBDD3-205ENST00000488106 GMPSP49915 693 aaPredicted RBP29.75■■■□□ 2.35
RHBDD3-205ENST00000488106 RABL6Q3YEC7 729 aaPredicted RBP29.75■■■□□ 2.35
RHBDD3-205ENST00000488106 ATF7IPQ6VMQ6 1270 aa29.75■■■□□ 2.35
RHBDD3-205ENST00000488106 POLR2AP24928 1970 aaKnown RBP29.74■■■□□ 2.35
RHBDD3-205ENST00000488106 UBTFL1P0CB47 393 aaPredicted RBP29.74■■■□□ 2.35
RHBDD3-205ENST00000488106 KCNJ4P48050 445 aa29.74■■■□□ 2.35
RHBDD3-205ENST00000488106 HELBQ8NG08 1087 aaPredicted RBP29.74■■■□□ 2.35
RHBDD3-205ENST00000488106 CNNM1Q9NRU3 951 aa29.74■■■□□ 2.35
RHBDD3-205ENST00000488106 ZNF804BA4D1E1 1349 aa29.73■■■□□ 2.35
RHBDD3-205ENST00000488106 PSMD14O00487 310 aa29.73■■■□□ 2.35
RHBDD3-205ENST00000488106 EPS15P42566 896 aa29.73■■■□□ 2.35
RHBDD3-205ENST00000488106 LDHAL6AQ6ZMR3 332 aa29.73■■■□□ 2.35
RHBDD3-205ENST00000488106 CLUAP1Q96AJ1 413 aa29.73■■■□□ 2.35
RHBDD3-205ENST00000488106 KCNQ5Q9NR82 932 aa29.73■■■□□ 2.35
RHBDD3-205ENST00000488106 LEMD3Q9Y2U8 911 aa29.73■■■□□ 2.35
RHBDD3-205ENST00000488106 TAF5LO75529 589 aa29.72■■■□□ 2.35
RHBDD3-205ENST00000488106 MYH13Q9UKX3 1938 aa29.72■■■□□ 2.35
RHBDD3-205ENST00000488106 INTS3Q68E01 1043 aaKnown RBP29.71■■■□□ 2.35
RHBDD3-205ENST00000488106 LDHDQ86WU2 507 aa29.71■■■□□ 2.35
RHBDD3-205ENST00000488106 GPRC5DQ9NZD1 345 aa29.71■■■□□ 2.35
RHBDD3-205ENST00000488106 TRPM7Q96QT4 1865 aa29.7■■■□□ 2.35
RHBDD3-205ENST00000488106 KLRK1P26718 216 aa29.7■■■□□ 2.35
RHBDD3-205ENST00000488106 ZKSCAN2Q63HK3 967 aa29.7■■■□□ 2.35
RHBDD3-205ENST00000488106 CHADLQ6NUI6 762 aa29.7■■■□□ 2.35
RHBDD3-205ENST00000488106 MEIS3Q99687 375 aa29.7■■■□□ 2.35
RHBDD3-205ENST00000488106 CLEC11AQ9Y240 323 aa29.7■■■□□ 2.35
RHBDD3-205ENST00000488106 ZBTB12Q9Y330 459 aaPredicted RBP29.7■■■□□ 2.35
RHBDD3-205ENST00000488106 PLIN1O60240 522 aa29.69■■■□□ 2.34
RHBDD3-205ENST00000488106 PNMA8AQ86V59 439 aaPredicted RBP29.69■■■□□ 2.34
RHBDD3-205ENST00000488106 TXNRD3Q86VQ6 643 aa29.69■■■□□ 2.34
RHBDD3-205ENST00000488106 PUS3Q9BZE2 481 aaKnown RBP29.69■■■□□ 2.34
RHBDD3-205ENST00000488106 SNAP23O00161 211 aa29.68■■■□□ 2.34
RHBDD3-205ENST00000488106 LRRFIP2Q9Y608 721 aaKnown RBP29.68■■■□□ 2.34
RHBDD3-205ENST00000488106 KLHDC4Q8TBB5 520 aa29.67■■■□□ 2.34
RHBDD3-205ENST00000488106 SHTN1A0MZ66 631 aa29.66■■■□□ 2.34
RHBDD3-205ENST00000488106 ADARB2Q9NS39 739 aaKnown RBP29.65■■■□□ 2.34
RHBDD3-205ENST00000488106 MICALL2Q8IY33 904 aa29.64■■■□□ 2.34
RHBDD3-205ENST00000488106 ARAP2Q8WZ64 1704 aa29.63■■■□□ 2.33
RHBDD3-205ENST00000488106 APLP1P51693 650 aa29.63■■■□□ 2.33
RHBDD3-205ENST00000488106 LRRC24Q50LG9 513 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms