RNA–Protein interactions for RNA: ENST00000488085.1

PSMD2-216, Transcript of proteasome 26S subunit, non-ATPase 2, human

TSL 4

Gene PSMD2, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD2-216	ENST00000488085	XDH	P47989	1333 aa		11.17	□□□□□ -0.62
PSMD2-216	ENST00000488085	ITGA6	P23229	1130 aa		11.17	□□□□□ -0.62
PSMD2-216	ENST00000488085	BRPF1	P55201	1214 aa	Predicted RBP	11.17	□□□□□ -0.62
PSMD2-216	ENST00000488085	WASHC4	Q2M389	1173 aa		11.17	□□□□□ -0.62
PSMD2-216	ENST00000488085	CHADL	Q6NUI6	762 aa		11.17	□□□□□ -0.62
PSMD2-216	ENST00000488085	LDHD	Q86WU2	507 aa		11.17	□□□□□ -0.62
PSMD2-216	ENST00000488085	EYA3	Q99504	573 aa		11.17	□□□□□ -0.62
PSMD2-216	ENST00000488085	C6orf229	H3BNL8	230 aa		11.16	□□□□□ -0.62
PSMD2-216	ENST00000488085	FAM161A	Q3B820	660 aa		11.16	□□□□□ -0.62
PSMD2-216	ENST00000488085	CIAPIN1	Q6FI81	312 aa		11.16	□□□□□ -0.62
PSMD2-216	ENST00000488085	SLC4A10	Q6U841	1118 aa		11.16	□□□□□ -0.62
PSMD2-216	ENST00000488085	PNMA8A	Q86V59	439 aa	Predicted RBP	11.16	□□□□□ -0.62
PSMD2-216	ENST00000488085	DNAJC5G	Q8N7S2	189 aa		11.16	□□□□□ -0.62
PSMD2-216	ENST00000488085	SRCIN1	Q9C0H9	1055 aa		11.16	□□□□□ -0.62
PSMD2-216	ENST00000488085	ANKIB1	Q9P2G1	1089 aa		11.16	□□□□□ -0.62
PSMD2-216	ENST00000488085	GGA1	Q9UJY5	639 aa		11.16	□□□□□ -0.62
PSMD2-216	ENST00000488085	MINPP1	Q9UNW1	487 aa		11.16	□□□□□ -0.62
PSMD2-216	ENST00000488085	GJA3	Q9Y6H8	435 aa		11.16	□□□□□ -0.62
PSMD2-216	ENST00000488085	RIMBP2	O15034	1052 aa		11.15	□□□□□ -0.62
PSMD2-216	ENST00000488085	UFL1	O94874	794 aa		11.15	□□□□□ -0.62
PSMD2-216	ENST00000488085	ATP2B4	P23634	1241 aa		11.15	□□□□□ -0.62
PSMD2-216	ENST00000488085	EPS15	P42566	896 aa		11.15	□□□□□ -0.62
PSMD2-216	ENST00000488085	EPHA10	Q5JZY3	1008 aa		11.15	□□□□□ -0.62
PSMD2-216	ENST00000488085	KAZALD1	Q96I82	304 aa		11.15	□□□□□ -0.62
PSMD2-216	ENST00000488085	GPR101	Q96P66	508 aa	Predicted RBP	11.15	□□□□□ -0.62
PSMD2-216	ENST00000488085	BCL2L13	Q9BXK5	485 aa		11.15	□□□□□ -0.62
PSMD2-216	ENST00000488085	GPRC5D	Q9NZD1	345 aa		11.15	□□□□□ -0.62
PSMD2-216	ENST00000488085	ZNF609	O15014	1411 aa		11.15	□□□□□ -0.62
PSMD2-216	ENST00000488085	ECM29	Q5VYK3	1845 aa		11.14	□□□□□ -0.63
PSMD2-216	ENST00000488085	PASK	Q96RG2	1323 aa		11.14	□□□□□ -0.63
PSMD2-216	ENST00000488085	MYH13	Q9UKX3	1938 aa		11.14	□□□□□ -0.63
PSMD2-216	ENST00000488085	ECE2	O60344	883 aa		11.14	□□□□□ -0.63
PSMD2-216	ENST00000488085	RAD17	O75943	681 aa		11.14	□□□□□ -0.63
PSMD2-216	ENST00000488085	ITGBL1	O95965	494 aa	Predicted RBP	11.14	□□□□□ -0.63
PSMD2-216	ENST00000488085	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.14	□□□□□ -0.63
PSMD2-216	ENST00000488085	LMOD1	P29536	600 aa	Predicted RBP	11.14	□□□□□ -0.63
PSMD2-216	ENST00000488085	IGHMBP2	P38935	993 aa	Known RBP	11.14	□□□□□ -0.63
PSMD2-216	ENST00000488085	GMPS	P49915	693 aa	Predicted RBP	11.14	□□□□□ -0.63
PSMD2-216	ENST00000488085	TNIP1	Q15025	636 aa		11.14	□□□□□ -0.63
PSMD2-216	ENST00000488085	USP50	Q70EL3	339 aa	Predicted RBP	11.14	□□□□□ -0.63
PSMD2-216	ENST00000488085	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.14	□□□□□ -0.63
PSMD2-216	ENST00000488085	DBNDD1	Q9H9R9	158 aa		11.14	□□□□□ -0.63
PSMD2-216	ENST00000488085	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.14	□□□□□ -0.63
PSMD2-216	ENST00000488085	MED23	Q9ULK4	1368 aa		11.14	□□□□□ -0.63
PSMD2-216	ENST00000488085	ANKRD18B	A2A2Z9	1011 aa		11.13	□□□□□ -0.63
PSMD2-216	ENST00000488085	WTIP	A6NIX2	430 aa	Predicted RBP	11.13	□□□□□ -0.63
PSMD2-216	ENST00000488085	PSMD14	O00487	310 aa		11.13	□□□□□ -0.63
PSMD2-216	ENST00000488085	CCT4	P50991	539 aa	Known RBP	11.13	□□□□□ -0.63
PSMD2-216	ENST00000488085	RARS	P54136	660 aa	Known RBP	11.13	□□□□□ -0.63
PSMD2-216	ENST00000488085	IFIT5	Q13325	482 aa	Known RBP	11.13	□□□□□ -0.63
PSMD2-216	ENST00000488085	DOK7	Q18PE1	504 aa		11.13	□□□□□ -0.63
PSMD2-216	ENST00000488085	RABL6	Q3YEC7	729 aa	Predicted RBP	11.13	□□□□□ -0.63
PSMD2-216	ENST00000488085	EAPP	Q56P03	285 aa	Predicted RBP	11.13	□□□□□ -0.63
PSMD2-216	ENST00000488085	LMBR1L	Q6UX01	489 aa		11.13	□□□□□ -0.63
PSMD2-216	ENST00000488085	DPF2	Q92785	391 aa		11.13	□□□□□ -0.63
PSMD2-216	ENST00000488085	KCNQ5	Q9NR82	932 aa		11.13	□□□□□ -0.63
PSMD2-216	ENST00000488085	ADARB2	Q9NS39	739 aa	Known RBP	11.13	□□□□□ -0.63
PSMD2-216	ENST00000488085	SMC4	Q9NTJ3	1288 aa		11.13	□□□□□ -0.63
PSMD2-216	ENST00000488085	LEMD3	Q9Y2U8	911 aa		11.13	□□□□□ -0.63
PSMD2-216	ENST00000488085	ARAP2	Q8WZ64	1704 aa		11.12	□□□□□ -0.63
PSMD2-216	ENST00000488085	VIL1	P09327	827 aa	Known RBP	11.12	□□□□□ -0.63
PSMD2-216	ENST00000488085	HTRA3	P83110	453 aa		11.12	□□□□□ -0.63
PSMD2-216	ENST00000488085	IFFO2	Q5TF58	517 aa		11.12	□□□□□ -0.63
PSMD2-216	ENST00000488085	SUCLG2	Q96I99	432 aa		11.12	□□□□□ -0.63
PSMD2-216	ENST00000488085	MPHOSPH8	Q99549	860 aa		11.12	□□□□□ -0.63
PSMD2-216	ENST00000488085	ANKRD2	Q9GZV1	360 aa		11.12	□□□□□ -0.63
PSMD2-216	ENST00000488085	USP44	Q9H0E7	712 aa		11.12	□□□□□ -0.63
PSMD2-216	ENST00000488085	PGAP2	Q9UHJ9	254 aa		11.12	□□□□□ -0.63
PSMD2-216	ENST00000488085	IRS2	Q9Y4H2	1338 aa		11.11	□□□□□ -0.63
PSMD2-216	ENST00000488085	RPS12	P25398	132 aa	Known RBP	11.11	□□□□□ -0.63
PSMD2-216	ENST00000488085	CHRND	Q07001	517 aa		11.11	□□□□□ -0.63
PSMD2-216	ENST00000488085	PODN	Q7Z5L7	613 aa		11.11	□□□□□ -0.63
PSMD2-216	ENST00000488085	ARHGAP45	Q92619	1136 aa		11.11	□□□□□ -0.63
PSMD2-216	ENST00000488085	NOB1	Q9ULX3	412 aa	Known RBP	11.11	□□□□□ -0.63
PSMD2-216	ENST00000488085	SHTN1	A0MZ66	631 aa		11.1	□□□□□ -0.63
PSMD2-216	ENST00000488085	HIRA	P54198	1017 aa	Predicted RBP	11.1	□□□□□ -0.63
PSMD2-216	ENST00000488085	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
PSMD2-216	ENST00000488085	CCDC57	Q2TAC2	916 aa		11.1	□□□□□ -0.63
PSMD2-216	ENST00000488085	MAP1S	Q66K74	1059 aa	Predicted RBP	11.1	□□□□□ -0.63
PSMD2-216	ENST00000488085	C15orf52	Q6ZUT6	534 aa	Known RBP	11.1	□□□□□ -0.63
PSMD2-216	ENST00000488085	TXNRD3	Q86VQ6	643 aa		11.1	□□□□□ -0.63
PSMD2-216	ENST00000488085	CNTROB	Q8N137	903 aa		11.1	□□□□□ -0.63
PSMD2-216	ENST00000488085	ANKRD44	Q8N8A2	993 aa		11.1	□□□□□ -0.63
PSMD2-216	ENST00000488085	KLRG1	Q96E93	195 aa		11.1	□□□□□ -0.63
PSMD2-216	ENST00000488085	GML	Q99445	158 aa		11.1	□□□□□ -0.63
PSMD2-216	ENST00000488085	BICC1	Q9H694	974 aa	Known RBP	11.1	□□□□□ -0.63
PSMD2-216	ENST00000488085	CREBZF	Q9NS37	354 aa		11.1	□□□□□ -0.63
PSMD2-216	ENST00000488085	CNOT7	Q9UIV1	285 aa	Known RBP	11.1	□□□□□ -0.63
PSMD2-216	ENST00000488085	CLEC11A	Q9Y240	323 aa		11.1	□□□□□ -0.63
PSMD2-216	ENST00000488085	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.1	□□□□□ -0.63
PSMD2-216	ENST00000488085	ZNF804B	A4D1E1	1349 aa		11.09	□□□□□ -0.63
PSMD2-216	ENST00000488085	MICALL2	Q8IY33	904 aa		11.09	□□□□□ -0.63
PSMD2-216	ENST00000488085	JMY	Q8N9B5	988 aa		11.09	□□□□□ -0.63
PSMD2-216	ENST00000488085	AGBL3	Q8NEM8	1001 aa		11.09	□□□□□ -0.63
PSMD2-216	ENST00000488085	TRPM4	Q8TD43	1214 aa		11.09	□□□□□ -0.63
PSMD2-216	ENST00000488085	ZC3H15	Q8WU90	426 aa	Known RBP	11.09	□□□□□ -0.63
PSMD2-216	ENST00000488085	ZNF594	Q96JF6	807 aa	Predicted RBP	11.09	□□□□□ -0.63
PSMD2-216	ENST00000488085	API5	Q9BZZ5	524 aa	Known RBP	11.09	□□□□□ -0.63
PSMD2-216	ENST00000488085	COA1	Q9GZY4	146 aa		11.09	□□□□□ -0.63
PSMD2-216	ENST00000488085	CHMP3	Q9Y3E7	222 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms