RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 YY1P25490 414 aa21.48■■□□□ 1.03
SHROOM1-205ENST00000488072 KLRK1P26718 216 aa21.48■■□□□ 1.03
SHROOM1-205ENST00000488072 AOC3Q16853 763 aa21.48■■□□□ 1.03
SHROOM1-205ENST00000488072 TAF7LQ5H9L4 462 aa21.48■■□□□ 1.03
SHROOM1-205ENST00000488072 CC2D2BQ6DHV5 1058 aa21.48■■□□□ 1.03
SHROOM1-205ENST00000488072 TBC1D16Q8TBP0 767 aa21.48■■□□□ 1.03
SHROOM1-205ENST00000488072 MPHOSPH8Q99549 860 aa21.48■■□□□ 1.03
SHROOM1-205ENST00000488072 SUPT16HQ9Y5B9 1047 aaKnown RBP21.48■■□□□ 1.03
SHROOM1-205ENST00000488072 LTBP3Q9NS15 1303 aa21.48■■□□□ 1.03
SHROOM1-205ENST00000488072 LRRC37AA6NMS7 1700 aa21.47■■□□□ 1.03
SHROOM1-205ENST00000488072 C6orf229H3BNL8 230 aa21.47■■□□□ 1.03
SHROOM1-205ENST00000488072 IARSP41252 1262 aaKnown RBP21.47■■□□□ 1.03
SHROOM1-205ENST00000488072 PTPN12Q05209 780 aaKnown RBP21.47■■□□□ 1.03
SHROOM1-205ENST00000488072 CHRNDQ07001 517 aa21.47■■□□□ 1.03
SHROOM1-205ENST00000488072 PSMD1Q99460 953 aa21.47■■□□□ 1.03
SHROOM1-205ENST00000488072 ANKIB1Q9P2G1 1089 aa21.47■■□□□ 1.03
SHROOM1-205ENST00000488072 UFL1O94874 794 aa21.46■■□□□ 1.03
SHROOM1-205ENST00000488072 PDE3AQ14432 1141 aa21.46■■□□□ 1.03
SHROOM1-205ENST00000488072 LDHAL6AQ6ZMR3 332 aa21.46■■□□□ 1.03
SHROOM1-205ENST00000488072 TMC4Q7Z404 712 aa21.46■■□□□ 1.03
SHROOM1-205ENST00000488072 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.46■■□□□ 1.03
SHROOM1-205ENST00000488072 ZNF526Q8TF50 670 aaPredicted RBP21.46■■□□□ 1.03
SHROOM1-205ENST00000488072 RTFDC1Q9BY42 306 aaPredicted RBP21.46■■□□□ 1.03
SHROOM1-205ENST00000488072 SIL1Q9H173 461 aa21.46■■□□□ 1.03
SHROOM1-205ENST00000488072 CNNM1Q9NRU3 951 aa21.46■■□□□ 1.03
SHROOM1-205ENST00000488072 CRBNQ96SW2 442 aa21.45■■□□□ 1.02
SHROOM1-205ENST00000488072 TMX4Q9H1E5 349 aaPredicted RBP21.45■■□□□ 1.02
SHROOM1-205ENST00000488072 RIPOR2Q9Y4F9 1068 aa21.45■■□□□ 1.02
SHROOM1-205ENST00000488072 SBF1O95248 1867 aa21.45■■□□□ 1.02
SHROOM1-205ENST00000488072 SRGAP3O43295 1099 aa21.44■■□□□ 1.02
SHROOM1-205ENST00000488072 PPIP5K2O43314 1243 aa21.44■■□□□ 1.02
SHROOM1-205ENST00000488072 MS4A1P11836 297 aa21.44■■□□□ 1.02
SHROOM1-205ENST00000488072 DOK7Q18PE1 504 aa21.44■■□□□ 1.02
SHROOM1-205ENST00000488072 TXNRD3Q86VQ6 643 aa21.44■■□□□ 1.02
SHROOM1-205ENST00000488072 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.44■■□□□ 1.02
SHROOM1-205ENST00000488072 LTBP1Q14766 1721 aa21.43■■□□□ 1.02
SHROOM1-205ENST00000488072 IRX6P78412 446 aaPredicted RBP21.43■■□□□ 1.02
SHROOM1-205ENST00000488072 ATG9AQ7Z3C6 839 aa21.43■■□□□ 1.02
SHROOM1-205ENST00000488072 LARGE2Q8N3Y3 721 aa21.43■■□□□ 1.02
SHROOM1-205ENST00000488072 ZBTB40Q9NUA8 1239 aa21.43■■□□□ 1.02
SHROOM1-205ENST00000488072 PODXL2Q9NZ53 605 aa21.43■■□□□ 1.02
SHROOM1-205ENST00000488072 GGA1Q9UJY5 639 aa21.43■■□□□ 1.02
SHROOM1-205ENST00000488072 XDHP47989 1333 aa21.43■■□□□ 1.02
SHROOM1-205ENST00000488072 ZNF541Q9H0D2 1346 aa21.43■■□□□ 1.02
SHROOM1-205ENST00000488072 KCNQ5Q9NR82 932 aa21.42■■□□□ 1.02
SHROOM1-205ENST00000488072 CCDC88AQ3V6T2 1871 aa21.41■■□□□ 1.02
SHROOM1-205ENST00000488072 ATP8B2P98198 1209 aa21.41■■□□□ 1.02
SHROOM1-205ENST00000488072 MTX1Q13505 466 aa21.41■■□□□ 1.02
SHROOM1-205ENST00000488072 CEP85Q6P2H3 762 aa21.41■■□□□ 1.02
SHROOM1-205ENST00000488072 DBNDD1Q9H9R9 158 aa21.41■■□□□ 1.02
SHROOM1-205ENST00000488072 DDX19BQ9UMR2 479 aa21.41■■□□□ 1.02
SHROOM1-205ENST00000488072 YDJCA8MPS7 323 aa21.4■■□□□ 1.02
SHROOM1-205ENST00000488072 EYA2O00167 538 aa21.4■■□□□ 1.02
SHROOM1-205ENST00000488072 KIAA2012Q0VF49 1180 aa21.4■■□□□ 1.02
SHROOM1-205ENST00000488072 WASHC4Q2M389 1173 aa21.4■■□□□ 1.02
SHROOM1-205ENST00000488072 SIRT2Q8IXJ6 389 aa21.4■■□□□ 1.02
SHROOM1-205ENST00000488072 CHD4Q14839 1912 aa21.39■■□□□ 1.02
SHROOM1-205ENST00000488072 ATP2B4P23634 1241 aa21.39■■□□□ 1.01
SHROOM1-205ENST00000488072 POLA2Q14181 598 aa21.39■■□□□ 1.01
SHROOM1-205ENST00000488072 ZNF804BA4D1E1 1349 aa21.38■■□□□ 1.01
SHROOM1-205ENST00000488072 IRS2Q9Y4H2 1338 aa21.38■■□□□ 1.01
SHROOM1-205ENST00000488072 METTL24Q5JXM2 366 aa21.38■■□□□ 1.01
SHROOM1-205ENST00000488072 VGLL2Q8N8G2 317 aa21.38■■□□□ 1.01
SHROOM1-205ENST00000488072 SUPT20HQ8NEM7 779 aa21.38■■□□□ 1.01
SHROOM1-205ENST00000488072 ANKRD2Q9GZV1 360 aa21.38■■□□□ 1.01
SHROOM1-205ENST00000488072 COPRSQ9NQ92 184 aa21.38■■□□□ 1.01
SHROOM1-205ENST00000488072 DDNO94850 711 aaPredicted RBP21.37■■□□□ 1.01
SHROOM1-205ENST00000488072 GRIPAP1Q4V328 841 aa21.37■■□□□ 1.01
SHROOM1-205ENST00000488072 ZNF784Q8NCA9 323 aaPredicted RBP21.37■■□□□ 1.01
SHROOM1-205ENST00000488072 FZD9O00144 591 aa21.36■■□□□ 1.01
SHROOM1-205ENST00000488072 RAD17O75943 681 aa21.36■■□□□ 1.01
SHROOM1-205ENST00000488072 NIM1KQ8IY84 436 aa21.36■■□□□ 1.01
SHROOM1-205ENST00000488072 SSH3Q8TE77 659 aa21.36■■□□□ 1.01
SHROOM1-205ENST00000488072 HDAC5Q9UQL6 1122 aa21.36■■□□□ 1.01
SHROOM1-205ENST00000488072 TIAM2Q8IVF5 1701 aa21.35■■□□□ 1.01
SHROOM1-205ENST00000488072 KCNJ4P48050 445 aa21.35■■□□□ 1.01
SHROOM1-205ENST00000488072 EXOC6Q8TAG9 804 aa21.35■■□□□ 1.01
SHROOM1-205ENST00000488072 JDP2Q8WYK2 163 aa21.35■■□□□ 1.01
SHROOM1-205ENST00000488072 ZC3H12CQ9C0D7 883 aaKnown RBP21.35■■□□□ 1.01
SHROOM1-205ENST00000488072 NMRK2Q9NPI5 230 aa21.35■■□□□ 1.01
SHROOM1-205ENST00000488072 LEMD3Q9Y2U8 911 aa21.35■■□□□ 1.01
SHROOM1-205ENST00000488072 ECE2O60344 883 aa21.34■■□□□ 1.01
SHROOM1-205ENST00000488072 CXCL9Q07325 125 aa21.34■■□□□ 1.01
SHROOM1-205ENST00000488072 EYA3Q99504 573 aa21.34■■□□□ 1.01
SHROOM1-205ENST00000488072 PCDHB15Q9Y5E8 787 aa21.34■■□□□ 1.01
SHROOM1-205ENST00000488072 GJA3Q9Y6H8 435 aa21.34■■□□□ 1.01
SHROOM1-205ENST00000488072 A0A1B0GUL6 1792 aa21.33■■□□□ 1.01
SHROOM1-205ENST00000488072 TFCP2Q12800 502 aa21.33■■□□□ 1.01
SHROOM1-205ENST00000488072 MXD3Q9BW11 206 aa21.33■■□□□ 1.01
SHROOM1-205ENST00000488072 ZNRF3Q9ULT6 936 aa21.33■■□□□ 1.01
SHROOM1-205ENST00000488072 MROH5Q6ZUA9 1318 aa21.32■■□□□ 1
SHROOM1-205ENST00000488072 POTECB2RU33 542 aa21.32■■□□□ 1
SHROOM1-205ENST00000488072 SASH1O94885 1247 aa21.32■■□□□ 1
SHROOM1-205ENST00000488072 PDE8BO95263 885 aa21.32■■□□□ 1
SHROOM1-205ENST00000488072 GYG1P46976 350 aa21.32■■□□□ 1
SHROOM1-205ENST00000488072 JAG2Q9Y219 1238 aa21.32■■□□□ 1
SHROOM1-205ENST00000488072 SHTN1A0MZ66 631 aa21.31■■□□□ 1
SHROOM1-205ENST00000488072 GLTPD2A6NH11 291 aa21.31■■□□□ 1
SHROOM1-205ENST00000488072 SURF6O75683 361 aaKnown RBP21.31■■□□□ 1
SHROOM1-205ENST00000488072 CIAO1O76071 339 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms