RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 IL15P40933 162 aaPredicted RBP17.4■□□□□ 0.38
NUP188-207ENST00000487952 ERC1Q8IUD2 1116 aa17.4■□□□□ 0.38
NUP188-207ENST00000487952 ANKRD2Q9GZV1 360 aa17.4■□□□□ 0.38
NUP188-207ENST00000487952 EXOC6BQ9Y2D4 811 aa17.4■□□□□ 0.38
NUP188-207ENST00000487952 NOP58Q9Y2X3 529 aaKnown RBP17.4■□□□□ 0.38
NUP188-207ENST00000487952 MROH5Q6ZUA9 1318 aa17.4■□□□□ 0.38
NUP188-207ENST00000487952 CHRNDQ07001 517 aa17.39■□□□□ 0.37
NUP188-207ENST00000487952 CCDC93Q567U6 631 aa17.39■□□□□ 0.37
NUP188-207ENST00000487952 CCDC136Q96JN2 1154 aa17.39■□□□□ 0.37
NUP188-207ENST00000487952 ANKIB1Q9P2G1 1089 aa17.39■□□□□ 0.37
NUP188-207ENST00000487952 CEP126Q9P2H0 1117 aa17.39■□□□□ 0.37
NUP188-207ENST00000487952 MINPP1Q9UNW1 487 aa17.39■□□□□ 0.37
NUP188-207ENST00000487952 RIPOR2Q9Y4F9 1068 aa17.39■□□□□ 0.37
NUP188-207ENST00000487952 RAB11FIP3O75154 756 aa17.38■□□□□ 0.37
NUP188-207ENST00000487952 KCNJ4P48050 445 aa17.38■□□□□ 0.37
NUP188-207ENST00000487952 GRIPAP1Q4V328 841 aa17.38■□□□□ 0.37
NUP188-207ENST00000487952 ZBTB47Q9UFB7 747 aaPredicted RBP17.38■□□□□ 0.37
NUP188-207ENST00000487952 TAF1P21675 1872 aa17.37■□□□□ 0.37
NUP188-207ENST00000487952 COL4A1P02462 1669 aa17.37■□□□□ 0.37
NUP188-207ENST00000487952 APBB1O00213 710 aa17.37■□□□□ 0.37
NUP188-207ENST00000487952 DPP8Q6V1X1 898 aaPredicted RBP17.37■□□□□ 0.37
NUP188-207ENST00000487952 ATG9AQ7Z3C6 839 aa17.37■□□□□ 0.37
NUP188-207ENST00000487952 MPNDQ8N594 471 aa17.37■□□□□ 0.37
NUP188-207ENST00000487952 C7orf43Q8WVR3 580 aa17.37■□□□□ 0.37
NUP188-207ENST00000487952 GCC1Q96CN9 775 aa17.37■□□□□ 0.37
NUP188-207ENST00000487952 DCTPP1Q9H773 170 aa17.37■□□□□ 0.37
NUP188-207ENST00000487952 PPP4R2Q9NY27 417 aa17.37■□□□□ 0.37
NUP188-207ENST00000487952 NSFL1CQ9UNZ2 370 aaKnown RBP17.37■□□□□ 0.37
NUP188-207ENST00000487952 XDHP47989 1333 aa17.37■□□□□ 0.37
NUP188-207ENST00000487952 SLX4Q8IY92 1834 aa17.37■□□□□ 0.37
NUP188-207ENST00000487952 CACNA1SQ13698 1873 aa17.36■□□□□ 0.37
NUP188-207ENST00000487952 GPSM2P81274 684 aa17.36■□□□□ 0.37
NUP188-207ENST00000487952 GPR162Q16538 588 aa17.36■□□□□ 0.37
NUP188-207ENST00000487952 RTKN2Q8IZC4 609 aa17.36■□□□□ 0.37
NUP188-207ENST00000487952 HELBQ8NG08 1087 aaPredicted RBP17.36■□□□□ 0.37
NUP188-207ENST00000487952 KIF1BPQ96EK5 621 aa17.36■□□□□ 0.37
NUP188-207ENST00000487952 GGA1Q9UJY5 639 aa17.36■□□□□ 0.37
NUP188-207ENST00000487952 SPEF2Q9C093 1822 aa17.35■□□□□ 0.37
NUP188-207ENST00000487952 IGHDP01880 384 aa17.35■□□□□ 0.37
NUP188-207ENST00000487952 ATP2B4P23634 1241 aa17.35■□□□□ 0.37
NUP188-207ENST00000487952 OLFM4Q6UX06 510 aa17.35■□□□□ 0.37
NUP188-207ENST00000487952 DCAF8L1A6NGE4 600 aa17.34■□□□□ 0.37
NUP188-207ENST00000487952 C6orf229H3BNL8 230 aa17.34■□□□□ 0.37
NUP188-207ENST00000487952 TAF5LO75529 589 aa17.34■□□□□ 0.37
NUP188-207ENST00000487952 UFL1O94874 794 aa17.34■□□□□ 0.37
NUP188-207ENST00000487952 TFCP2Q12800 502 aa17.34■□□□□ 0.37
NUP188-207ENST00000487952 SLC51AQ86UW1 340 aa17.34■□□□□ 0.37
NUP188-207ENST00000487952 SUPT20HQ8NEM7 779 aa17.34■□□□□ 0.37
NUP188-207ENST00000487952 LRRCC1Q9C099 1032 aa17.34■□□□□ 0.37
NUP188-207ENST00000487952 BCL11AQ9H165 835 aa17.34■□□□□ 0.37
NUP188-207ENST00000487952 AKAP2Q9Y2D5 859 aa17.34■□□□□ 0.37
NUP188-207ENST00000487952 LEMD3Q9Y2U8 911 aa17.34■□□□□ 0.37
NUP188-207ENST00000487952 BRCA1P38398 1863 aaKnown RBP17.33■□□□□ 0.37
NUP188-207ENST00000487952 SASH1O94885 1247 aa17.33■□□□□ 0.36
NUP188-207ENST00000487952 PDE8BO95263 885 aa17.33■□□□□ 0.36
NUP188-207ENST00000487952 PUM3Q15397 648 aaKnown RBP17.33■□□□□ 0.36
NUP188-207ENST00000487952 RHPN1Q8TCX5 695 aa17.33■□□□□ 0.36
NUP188-207ENST00000487952 EYA3Q99504 573 aa17.33■□□□□ 0.36
NUP188-207ENST00000487952 PODXL2Q9NZ53 605 aa17.33■□□□□ 0.36
NUP188-207ENST00000487952 ZNF804BA4D1E1 1349 aa17.32■□□□□ 0.36
NUP188-207ENST00000487952 IFIT1P09914 478 aaKnown RBP17.32■□□□□ 0.36
NUP188-207ENST00000487952 SLC5A1P13866 664 aa17.32■□□□□ 0.36
NUP188-207ENST00000487952 FKBP4Q02790 459 aaKnown RBP eCLIP17.32■□□□□ 0.36
NUP188-207ENST00000487952 UBE4AQ14139 1066 aa17.32■□□□□ 0.36
NUP188-207ENST00000487952 ATP2B3Q16720 1220 aa17.32■□□□□ 0.36
NUP188-207ENST00000487952 ARHGAP27Q6ZUM4 889 aa17.32■□□□□ 0.36
NUP188-207ENST00000487952 CLASRPQ8N2M8 674 aaKnown RBP17.32■□□□□ 0.36
NUP188-207ENST00000487952 LRRC37AA6NMS7 1700 aa17.32■□□□□ 0.36
NUP188-207ENST00000487952 GRIN3BO60391 1043 aa17.31■□□□□ 0.36
NUP188-207ENST00000487952 ANKRD45Q5TZF3 282 aa17.31■□□□□ 0.36
NUP188-207ENST00000487952 B4GALNT3Q6L9W6 998 aa17.31■□□□□ 0.36
NUP188-207ENST00000487952 CENPQQ7L2Z9 268 aaPredicted RBP17.31■□□□□ 0.36
NUP188-207ENST00000487952 SMC5Q8IY18 1101 aa17.31■□□□□ 0.36
NUP188-207ENST00000487952 VGLL2Q8N8G2 317 aa17.31■□□□□ 0.36
NUP188-207ENST00000487952 TBC1D16Q8TBP0 767 aa17.31■□□□□ 0.36
NUP188-207ENST00000487952 LPIN2Q92539 896 aa17.31■□□□□ 0.36
NUP188-207ENST00000487952 PSMD1Q99460 953 aa17.31■□□□□ 0.36
NUP188-207ENST00000487952 TAOK3Q9H2K8 898 aa17.31■□□□□ 0.36
NUP188-207ENST00000487952 IL1RAPL2Q9NP60 686 aa17.31■□□□□ 0.36
NUP188-207ENST00000487952 YBX3P16989 372 aaKnown RBP eCLIP17.3■□□□□ 0.36
NUP188-207ENST00000487952 TNNI3KQ59H18 835 aa17.3■□□□□ 0.36
NUP188-207ENST00000487952 NEUROD6Q96NK8 337 aa17.3■□□□□ 0.36
NUP188-207ENST00000487952 GPR108Q9NPR9 543 aa17.3■□□□□ 0.36
NUP188-207ENST00000487952 POLLQ9UGP5 575 aa17.3■□□□□ 0.36
NUP188-207ENST00000487952 FPGT-TNNI3KV9GXZ4 949 aa17.3■□□□□ 0.36
NUP188-207ENST00000487952 A0A1B0GUL7 405 aa17.29■□□□□ 0.36
NUP188-207ENST00000487952 G3V3G9 751 aa17.29■□□□□ 0.36
NUP188-207ENST00000487952 SNAP23O00161 211 aa17.29■□□□□ 0.36
NUP188-207ENST00000487952 DCAF8Q5TAQ9 597 aa17.29■□□□□ 0.36
NUP188-207ENST00000487952 RTFDC1Q9BY42 306 aaPredicted RBP17.29■□□□□ 0.36
NUP188-207ENST00000487952 ZC3H12CQ9C0D7 883 aaKnown RBP17.29■□□□□ 0.36
NUP188-207ENST00000487952 ARFGEF1Q9Y6D6 1849 aa17.28■□□□□ 0.36
NUP188-207ENST00000487952 NFKBIEO00221 500 aa17.28■□□□□ 0.36
NUP188-207ENST00000487952 SMARCA5O60264 1052 aaPredicted RBP17.28■□□□□ 0.36
NUP188-207ENST00000487952 IFIT2P09913 472 aaKnown RBP17.28■□□□□ 0.36
NUP188-207ENST00000487952 FGFR2P21802 821 aa17.28■□□□□ 0.36
NUP188-207ENST00000487952 WASHC4Q2M389 1173 aa17.28■□□□□ 0.36
NUP188-207ENST00000487952 GORABQ5T7V8 394 aa17.28■□□□□ 0.36
NUP188-207ENST00000487952 AACSQ86V21 672 aa17.28■□□□□ 0.36
NUP188-207ENST00000487952 GPR101Q96P66 508 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms