RNA–Protein interactions for RNA: ENST00000487670.1

TOM1-214, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-214ENST00000487670 PLEKHF1Q96S99 279 aa21.56■■□□□ 1.04
TOM1-214ENST00000487670 NSFL1CQ9UNZ2 370 aaKnown RBP21.56■■□□□ 1.04
TOM1-214ENST00000487670 LAMB1P07942 1786 aa21.56■■□□□ 1.04
TOM1-214ENST00000487670 KIAA0100Q14667 2235 aaKnown RBP21.55■■□□□ 1.04
TOM1-214ENST00000487670 COPS6Q7L5N1 327 aa21.55■■□□□ 1.04
TOM1-214ENST00000487670 XAGE3Q8WTP9 111 aa21.55■■□□□ 1.04
TOM1-214ENST00000487670 R3HDMLQ9H3Y0 253 aa21.55■■□□□ 1.04
TOM1-214ENST00000487670 C6orf229H3BNL8 230 aa21.54■■□□□ 1.04
TOM1-214ENST00000487670 ANGEL2Q5VTE6 544 aaKnown RBP21.54■■□□□ 1.04
TOM1-214ENST00000487670 SH3TC1Q8TE82 1336 aa21.54■■□□□ 1.04
TOM1-214ENST00000487670 RPS12P25398 132 aaKnown RBP21.53■■□□□ 1.04
TOM1-214ENST00000487670 NFE2L2Q16236 605 aa21.53■■□□□ 1.04
TOM1-214ENST00000487670 PRAMEF18Q5VWM3 479 aa21.53■■□□□ 1.04
TOM1-214ENST00000487670 SULF1Q8IWU6 871 aa21.53■■□□□ 1.04
TOM1-214ENST00000487670 MKRN3Q13064 507 aaKnown RBP21.52■■□□□ 1.04
TOM1-214ENST00000487670 TCIRG1Q13488 830 aa21.52■■□□□ 1.04
TOM1-214ENST00000487670 KRT24Q2M2I5 525 aa21.52■■□□□ 1.04
TOM1-214ENST00000487670 TSPYL4Q9UJ04 414 aa21.52■■□□□ 1.04
TOM1-214ENST00000487670 VIL1P09327 827 aaKnown RBP21.51■■□□□ 1.03
TOM1-214ENST00000487670 SCARF1Q14162 830 aa21.51■■□□□ 1.03
TOM1-214ENST00000487670 RTL5Q5HYW3 569 aaPredicted RBP21.51■■□□□ 1.03
TOM1-214ENST00000487670 TBC1D16Q8TBP0 767 aa21.51■■□□□ 1.03
TOM1-214ENST00000487670 HDAC9Q9UKV0 1011 aa21.51■■□□□ 1.03
TOM1-214ENST00000487670 UBE2Q2LH0YL09 131 aa21.5■■□□□ 1.03
TOM1-214ENST00000487670 HABP4Q5JVS0 413 aaKnown RBP21.5■■□□□ 1.03
TOM1-214ENST00000487670 FAM89AQ96GI7 184 aa21.5■■□□□ 1.03
TOM1-214ENST00000487670 TMC4Q7Z404 712 aa21.48■■□□□ 1.03
TOM1-214ENST00000487670 MYH3P11055 1940 aa21.48■■□□□ 1.03
TOM1-214ENST00000487670 ZNF609O15014 1411 aa21.47■■□□□ 1.03
TOM1-214ENST00000487670 POTEFA5A3E0 1075 aa21.47■■□□□ 1.03
TOM1-214ENST00000487670 ATP5J2-PTCD1G3V325 749 aa21.47■■□□□ 1.03
TOM1-214ENST00000487670 GPR25O00155 361 aa21.47■■□□□ 1.03
TOM1-214ENST00000487670 ZNF280AP59817 542 aaPredicted RBP21.47■■□□□ 1.03
TOM1-214ENST00000487670 ECM29Q5VYK3 1845 aa21.47■■□□□ 1.03
TOM1-214ENST00000487670 SF3B3Q15393 1217 aaKnown RBP21.46■■□□□ 1.03
TOM1-214ENST00000487670 PKN2Q16513 984 aaKnown RBP21.46■■□□□ 1.03
TOM1-214ENST00000487670 HSP90AB3PQ58FF7 597 aa21.46■■□□□ 1.03
TOM1-214ENST00000487670 FBXO46Q6PJ61 603 aaPredicted RBP21.46■■□□□ 1.03
TOM1-214ENST00000487670 WTIPA6NIX2 430 aaPredicted RBP21.45■■□□□ 1.02
TOM1-214ENST00000487670 CCER1Q8TC90 406 aaPredicted RBP21.45■■□□□ 1.02
TOM1-214ENST00000487670 GMLQ99445 158 aa21.45■■□□□ 1.02
TOM1-214ENST00000487670 SEC31BQ9NQW1 1179 aa21.45■■□□□ 1.02
TOM1-214ENST00000487670 ZSWIM8A7E2V4 1837 aa21.44■■□□□ 1.02
TOM1-214ENST00000487670 RSBN1LQ6PCB5 846 aaPredicted RBP21.44■■□□□ 1.02
TOM1-214ENST00000487670 ISCA1Q9BUE6 129 aa21.44■■□□□ 1.02
TOM1-214ENST00000487670 OTOFQ9HC10 1997 aa21.44■■□□□ 1.02
TOM1-214ENST00000487670 CEP290O15078 2479 aa21.43■■□□□ 1.02
TOM1-214ENST00000487670 UFL1O94874 794 aa21.43■■□□□ 1.02
TOM1-214ENST00000487670 EYA3Q99504 573 aa21.43■■□□□ 1.02
TOM1-214ENST00000487670 MXD3Q9BW11 206 aa21.43■■□□□ 1.02
TOM1-214ENST00000487670 MYOZ2Q9NPC6 264 aa21.43■■□□□ 1.02
TOM1-214ENST00000487670 CHPF2Q9P2E5 772 aa21.43■■□□□ 1.02
TOM1-214ENST00000487670 FZD1Q9UP38 647 aa21.43■■□□□ 1.02
TOM1-214ENST00000487670 TM4SF4P48230 202 aa21.42■■□□□ 1.02
TOM1-214ENST00000487670 NBPF9Q3BBW0 867 aa21.42■■□□□ 1.02
TOM1-214ENST00000487670 REM2Q8IYK8 340 aaPredicted RBP21.42■■□□□ 1.02
TOM1-214ENST00000487670 FKBP1BP68106 108 aa21.41■■□□□ 1.02
TOM1-214ENST00000487670 TRIOBPQ9H2D6 2365 aa21.4■■□□□ 1.02
TOM1-214ENST00000487670 PITPNM2Q9BZ72 1349 aa21.4■■□□□ 1.02
TOM1-214ENST00000487670 FXR1P51114 621 aaKnown RBP eCLIP21.4■■□□□ 1.02
TOM1-214ENST00000487670 RPS8P62241 208 aaKnown RBP21.4■■□□□ 1.02
TOM1-214ENST00000487670 ZC3H12CQ9C0D7 883 aaKnown RBP21.4■■□□□ 1.02
TOM1-214ENST00000487670 PODXL2Q9NZ53 605 aa21.4■■□□□ 1.02
TOM1-214ENST00000487670 FKTNO75072 461 aa21.39■■□□□ 1.01
TOM1-214ENST00000487670 CAP1Q01518 475 aa21.39■■□□□ 1.01
TOM1-214ENST00000487670 PRKG1Q13976 671 aa21.39■■□□□ 1.01
TOM1-214ENST00000487670 AGBL3Q8NEM8 1001 aa21.39■■□□□ 1.01
TOM1-214ENST00000487670 GCC1Q96CN9 775 aa21.39■■□□□ 1.01
TOM1-214ENST00000487670 IRS4O14654 1257 aaPredicted RBP21.38■■□□□ 1.01
TOM1-214ENST00000487670 NEFMP07197 916 aa21.38■■□□□ 1.01
TOM1-214ENST00000487670 PTPN12Q05209 780 aaKnown RBP21.38■■□□□ 1.01
TOM1-214ENST00000487670 TTLL12Q14166 644 aaPredicted RBP21.38■■□□□ 1.01
TOM1-214ENST00000487670 A0A1B0GUL6 1792 aa21.38■■□□□ 1.01
TOM1-214ENST00000487670 MAPK8IP3Q9UPT6 1336 aa21.37■■□□□ 1.01
TOM1-214ENST00000487670 USP17L8P0C7I0 530 aa21.37■■□□□ 1.01
TOM1-214ENST00000487670 NOM1Q5C9Z4 860 aaKnown RBP21.37■■□□□ 1.01
TOM1-214ENST00000487670 PLBD2Q8NHP8 589 aa21.37■■□□□ 1.01
TOM1-214ENST00000487670 JARID2Q92833 1246 aaPredicted RBP21.37■■□□□ 1.01
TOM1-214ENST00000487670 CCDC85AQ96PX6 553 aaPredicted RBP21.37■■□□□ 1.01
TOM1-214ENST00000487670 GGA1Q9UJY5 639 aa21.37■■□□□ 1.01
TOM1-214ENST00000487670 RANBP2P49792 3224 aaKnown RBP21.37■■□□□ 1.01
TOM1-214ENST00000487670 RIPK4P57078 832 aa21.36■■□□□ 1.01
TOM1-214ENST00000487670 ANKIB1Q9P2G1 1089 aa21.36■■□□□ 1.01
TOM1-214ENST00000487670 SSC5DA1L4H1 1573 aa21.36■■□□□ 1.01
TOM1-214ENST00000487670 G3V3G9 751 aa21.35■■□□□ 1.01
TOM1-214ENST00000487670 SASH1O94885 1247 aa21.35■■□□□ 1.01
TOM1-214ENST00000487670 DCAF8Q5TAQ9 597 aa21.35■■□□□ 1.01
TOM1-214ENST00000487670 OTOP1Q7RTM1 612 aa21.35■■□□□ 1.01
TOM1-214ENST00000487670 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.35■■□□□ 1.01
TOM1-214ENST00000487670 TRIM17Q9Y577 477 aa21.35■■□□□ 1.01
TOM1-214ENST00000487670 ANKRD13DQ6ZTN6 518 aa21.34■■□□□ 1.01
TOM1-214ENST00000487670 CFHR5Q9BXR6 569 aa21.34■■□□□ 1.01
TOM1-214ENST00000487670 COL6A3P12111 3177 aa21.33■■□□□ 1.01
TOM1-214ENST00000487670 WNT10BO00744 389 aa21.33■■□□□ 1.01
TOM1-214ENST00000487670 EN2P19622 333 aaPredicted RBP21.33■■□□□ 1.01
TOM1-214ENST00000487670 USP17L3A6NCW0 530 aa21.32■■□□□ 1
TOM1-214ENST00000487670 USP17L4A6NCW7 530 aa21.32■■□□□ 1
TOM1-214ENST00000487670 USP17L1Q7RTZ2 530 aa21.32■■□□□ 1
TOM1-214ENST00000487670 IGF2BP3O00425 579 aaKnown RBP eCLIP21.31■■□□□ 1
TOM1-214ENST00000487670 SPRYD7Q5W111 196 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms