RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 YDJCA8MPS7 323 aa25.91■■□□□ 1.74
HDAC4-209ENST00000487617 ALDH1L1O75891 902 aa25.91■■□□□ 1.74
HDAC4-209ENST00000487617 CSF1RP07333 972 aa25.91■■□□□ 1.74
HDAC4-209ENST00000487617 ITGA6P23229 1130 aa25.91■■□□□ 1.74
HDAC4-209ENST00000487617 EPS15P42566 896 aa25.91■■□□□ 1.74
HDAC4-209ENST00000487617 FAM161AQ3B820 660 aa25.91■■□□□ 1.74
HDAC4-209ENST00000487617 BCL2L13Q9BXK5 485 aa25.91■■□□□ 1.74
HDAC4-209ENST00000487617 ZC3H12CQ9C0D7 883 aaKnown RBP25.91■■□□□ 1.74
HDAC4-209ENST00000487617 SRCIN1Q9C0H9 1055 aa25.91■■□□□ 1.74
HDAC4-209ENST00000487617 XDHP47989 1333 aa25.9■■□□□ 1.74
HDAC4-209ENST00000487617 GRM8O00222 908 aa25.9■■□□□ 1.74
HDAC4-209ENST00000487617 IGHMBP2P38935 993 aaKnown RBP25.9■■□□□ 1.74
HDAC4-209ENST00000487617 DOK7Q18PE1 504 aa25.9■■□□□ 1.74
HDAC4-209ENST00000487617 C9orf78Q9NZ63 289 aaPredicted RBP25.9■■□□□ 1.74
HDAC4-209ENST00000487617 GMPSP49915 693 aaPredicted RBP25.89■■□□□ 1.74
HDAC4-209ENST00000487617 PTPRCP08575 1304 aa25.88■■□□□ 1.73
HDAC4-209ENST00000487617 LTBP1Q14766 1721 aa25.88■■□□□ 1.73
HDAC4-209ENST00000487617 G3V3G9 751 aa25.88■■□□□ 1.73
HDAC4-209ENST00000487617 ECE2O60344 883 aa25.88■■□□□ 1.73
HDAC4-209ENST00000487617 ATP2B4P23634 1241 aa25.88■■□□□ 1.73
HDAC4-209ENST00000487617 ALDH1L2Q3SY69 923 aa25.88■■□□□ 1.73
HDAC4-209ENST00000487617 DCAF8Q5TAQ9 597 aa25.88■■□□□ 1.73
HDAC4-209ENST00000487617 GPRC5DQ9NZD1 345 aa25.88■■□□□ 1.73
HDAC4-209ENST00000487617 MINPP1Q9UNW1 487 aa25.88■■□□□ 1.73
HDAC4-209ENST00000487617 MYH3P11055 1940 aa25.87■■□□□ 1.73
HDAC4-209ENST00000487617 FOXO4P98177 505 aa25.87■■□□□ 1.73
HDAC4-209ENST00000487617 DNAJC5GQ8N7S2 189 aa25.87■■□□□ 1.73
HDAC4-209ENST00000487617 SMC4Q9NTJ3 1288 aa25.87■■□□□ 1.73
HDAC4-209ENST00000487617 CHMP3Q9Y3E7 222 aa25.87■■□□□ 1.73
HDAC4-209ENST00000487617 ANKRD18BA2A2Z9 1011 aa25.86■■□□□ 1.73
HDAC4-209ENST00000487617 CT47B1P0C2W7 299 aaPredicted RBP25.86■■□□□ 1.73
HDAC4-209ENST00000487617 MPHOSPH8Q99549 860 aa25.86■■□□□ 1.73
HDAC4-209ENST00000487617 USP50Q70EL3 339 aaPredicted RBP25.85■■□□□ 1.73
HDAC4-209ENST00000487617 CEP350Q5VT06 3117 aa25.84■■□□□ 1.73
HDAC4-209ENST00000487617 PSMD14O00487 310 aa25.84■■□□□ 1.73
HDAC4-209ENST00000487617 IFIT5Q13325 482 aaKnown RBP25.84■■□□□ 1.73
HDAC4-209ENST00000487617 EPHA10Q5JZY3 1008 aa25.84■■□□□ 1.73
HDAC4-209ENST00000487617 MAP1SQ66K74 1059 aaPredicted RBP25.84■■□□□ 1.73
HDAC4-209ENST00000487617 LMBR1LQ6UX01 489 aa25.84■■□□□ 1.73
HDAC4-209ENST00000487617 KCNQ5Q9NR82 932 aa25.84■■□□□ 1.73
HDAC4-209ENST00000487617 ADARB2Q9NS39 739 aaKnown RBP25.84■■□□□ 1.73
HDAC4-209ENST00000487617 CNTROBQ8N137 903 aa25.83■■□□□ 1.73
HDAC4-209ENST00000487617 WTIPA6NIX2 430 aaPredicted RBP25.82■■□□□ 1.72
HDAC4-209ENST00000487617 ITGBL1O95965 494 aaPredicted RBP25.82■■□□□ 1.72
HDAC4-209ENST00000487617 CCT4P50991 539 aaKnown RBP25.82■■□□□ 1.72
HDAC4-209ENST00000487617 ZBTB12Q9Y330 459 aaPredicted RBP25.82■■□□□ 1.72
HDAC4-209ENST00000487617 ADAMTSL1Q8N6G6 1762 aa25.82■■□□□ 1.72
HDAC4-209ENST00000487617 KLRG1Q96E93 195 aa25.81■■□□□ 1.72
HDAC4-209ENST00000487617 ANKRD2Q9GZV1 360 aa25.81■■□□□ 1.72
HDAC4-209ENST00000487617 CNOT7Q9UIV1 285 aaKnown RBP25.81■■□□□ 1.72
HDAC4-209ENST00000487617 PASKQ96RG2 1323 aa25.81■■□□□ 1.72
HDAC4-209ENST00000487617 NBPF7P0C2Y1 421 aaPredicted RBP25.8■■□□□ 1.72
HDAC4-209ENST00000487617 CCDC57Q2TAC2 916 aa25.8■■□□□ 1.72
HDAC4-209ENST00000487617 SUCLG2Q96I99 432 aa25.8■■□□□ 1.72
HDAC4-209ENST00000487617 LEMD3Q9Y2U8 911 aa25.8■■□□□ 1.72
HDAC4-209ENST00000487617 H7C1D1 291 aa25.79■■□□□ 1.72
HDAC4-209ENST00000487617 TAF7LQ5H9L4 462 aa25.79■■□□□ 1.72
HDAC4-209ENST00000487617 MICALL2Q8IY33 904 aa25.79■■□□□ 1.72
HDAC4-209ENST00000487617 DPF2Q92785 391 aa25.79■■□□□ 1.72
HDAC4-209ENST00000487617 UTYO14607 1347 aa25.79■■□□□ 1.72
HDAC4-209ENST00000487617 MED23Q9ULK4 1368 aa25.79■■□□□ 1.72
HDAC4-209ENST00000487617 SPEF2Q9C093 1822 aa25.79■■□□□ 1.72
HDAC4-209ENST00000487617 SHTN1A0MZ66 631 aa25.78■■□□□ 1.72
HDAC4-209ENST00000487617 RPS12P25398 132 aaKnown RBP25.78■■□□□ 1.72
HDAC4-209ENST00000487617 HNRNPUQ00839 825 aaKnown RBP eCLIP25.78■■□□□ 1.72
HDAC4-209ENST00000487617 CHRNDQ07001 517 aa25.78■■□□□ 1.72
HDAC4-209ENST00000487617 CREBZFQ9NS37 354 aa25.78■■□□□ 1.72
HDAC4-209ENST00000487617 VIL1P09327 827 aaKnown RBP25.77■■□□□ 1.72
HDAC4-209ENST00000487617 NOB1Q9ULX3 412 aaKnown RBP25.77■■□□□ 1.72
HDAC4-209ENST00000487617 ZNF804BA4D1E1 1349 aa25.77■■□□□ 1.72
HDAC4-209ENST00000487617 KCNJ4P48050 445 aa25.76■■□□□ 1.71
HDAC4-209ENST00000487617 PODNQ7Z5L7 613 aa25.76■■□□□ 1.71
HDAC4-209ENST00000487617 TRPM4Q8TD43 1214 aa25.76■■□□□ 1.71
HDAC4-209ENST00000487617 KAZALD1Q96I82 304 aa25.76■■□□□ 1.71
HDAC4-209ENST00000487617 ZNF594Q96JF6 807 aaPredicted RBP25.76■■□□□ 1.71
HDAC4-209ENST00000487617 RARSP54136 660 aaKnown RBP25.75■■□□□ 1.71
HDAC4-209ENST00000487617 HIRAP54198 1017 aaPredicted RBP25.74■■□□□ 1.71
HDAC4-209ENST00000487617 BRPF1P55201 1214 aaPredicted RBP25.74■■□□□ 1.71
HDAC4-209ENST00000487617 LDHAL6AQ6ZMR3 332 aa25.74■■□□□ 1.71
HDAC4-209ENST00000487617 HELBQ8NG08 1087 aaPredicted RBP25.74■■□□□ 1.71
HDAC4-209ENST00000487617 BICC1Q9H694 974 aaKnown RBP25.74■■□□□ 1.71
HDAC4-209ENST00000487617 TMEM88BA6NKF7 163 aa25.73■■□□□ 1.71
HDAC4-209ENST00000487617 TAF5LO75529 589 aa25.73■■□□□ 1.71
HDAC4-209ENST00000487617 RSBN1LQ6PCB5 846 aaPredicted RBP25.73■■□□□ 1.71
HDAC4-209ENST00000487617 SAMD7Q7Z3H4 446 aa25.73■■□□□ 1.71
HDAC4-209ENST00000487617 TXNRD3Q86VQ6 643 aa25.73■■□□□ 1.71
HDAC4-209ENST00000487617 API5Q9BZZ5 524 aaKnown RBP25.73■■□□□ 1.71
HDAC4-209ENST00000487617 COA1Q9GZY4 146 aa25.73■■□□□ 1.71
HDAC4-209ENST00000487617 USP44Q9H0E7 712 aa25.73■■□□□ 1.71
HDAC4-209ENST00000487617 CNNM1Q9NRU3 951 aa25.73■■□□□ 1.71
HDAC4-209ENST00000487617 USP17L3A6NCW0 530 aa25.72■■□□□ 1.71
HDAC4-209ENST00000487617 USP17L4A6NCW7 530 aa25.72■■□□□ 1.71
HDAC4-209ENST00000487617 KLRK1P26718 216 aa25.72■■□□□ 1.71
HDAC4-209ENST00000487617 USP17L1Q7RTZ2 530 aa25.72■■□□□ 1.71
HDAC4-209ENST00000487617 TBC1D10BQ4KMP7 808 aaPredicted RBP25.71■■□□□ 1.71
HDAC4-209ENST00000487617 ZC3H15Q8WU90 426 aaKnown RBP25.71■■□□□ 1.71
HDAC4-209ENST00000487617 SCN9AQ15858 1988 aa25.71■■□□□ 1.71
HDAC4-209ENST00000487617 SNAP23O00161 211 aa25.7■■□□□ 1.7
HDAC4-209ENST00000487617 PLIN1O60240 522 aa25.7■■□□□ 1.7
HDAC4-209ENST00000487617 RABL6Q3YEC7 729 aaPredicted RBP25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms