RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 ZBTB7BO15156 539 aaPredicted RBP24.47■■□□□ 1.51
SEC22A-208ENST00000487572 SUPT20HQ8NEM7 779 aa24.47■■□□□ 1.51
SEC22A-208ENST00000487572 CNNM1Q9NRU3 951 aa24.47■■□□□ 1.51
SEC22A-208ENST00000487572 C6orf229H3BNL8 230 aa24.46■■□□□ 1.51
SEC22A-208ENST00000487572 IARSP41252 1262 aaKnown RBP24.46■■□□□ 1.51
SEC22A-208ENST00000487572 LDHAL6AQ6ZMR3 332 aa24.46■■□□□ 1.51
SEC22A-208ENST00000487572 KLHDC4Q8TBB5 520 aa24.46■■□□□ 1.51
SEC22A-208ENST00000487572 SBF1O95248 1867 aa24.46■■□□□ 1.51
SEC22A-208ENST00000487572 XDHP47989 1333 aa24.45■■□□□ 1.5
SEC22A-208ENST00000487572 RTFDC1Q9BY42 306 aaPredicted RBP24.45■■□□□ 1.5
SEC22A-208ENST00000487572 DDX19BQ9UMR2 479 aa24.45■■□□□ 1.5
SEC22A-208ENST00000487572 DUOX1Q9NRD9 1551 aa24.45■■□□□ 1.5
SEC22A-208ENST00000487572 PPIP5K2O43314 1243 aa24.44■■□□□ 1.5
SEC22A-208ENST00000487572 UFL1O94874 794 aa24.44■■□□□ 1.5
SEC22A-208ENST00000487572 AOC3Q16853 763 aa24.44■■□□□ 1.5
SEC22A-208ENST00000487572 TBC1D16Q8TBP0 767 aa24.44■■□□□ 1.5
SEC22A-208ENST00000487572 GPR101Q96P66 508 aaPredicted RBP24.44■■□□□ 1.5
SEC22A-208ENST00000487572 PUS3Q9BZE2 481 aaKnown RBP24.44■■□□□ 1.5
SEC22A-208ENST00000487572 POLLQ9UGP5 575 aa24.44■■□□□ 1.5
SEC22A-208ENST00000487572 GGA1Q9UJY5 639 aa24.44■■□□□ 1.5
SEC22A-208ENST00000487572 CCDC88AQ3V6T2 1871 aa24.43■■□□□ 1.5
SEC22A-208ENST00000487572 CHRNDQ07001 517 aa24.43■■□□□ 1.5
SEC22A-208ENST00000487572 LARGE2Q8N3Y3 721 aa24.43■■□□□ 1.5
SEC22A-208ENST00000487572 PODXL2Q9NZ53 605 aa24.43■■□□□ 1.5
SEC22A-208ENST00000487572 LTBP1Q14766 1721 aa24.42■■□□□ 1.5
SEC22A-208ENST00000487572 SRGAP3O43295 1099 aa24.42■■□□□ 1.5
SEC22A-208ENST00000487572 RFX5P48382 616 aaPredicted RBP24.42■■□□□ 1.5
SEC22A-208ENST00000487572 HELBQ8NG08 1087 aaPredicted RBP24.42■■□□□ 1.5
SEC22A-208ENST00000487572 ANKRD2Q9GZV1 360 aa24.42■■□□□ 1.5
SEC22A-208ENST00000487572 TIAM2Q8IVF5 1701 aa24.41■■□□□ 1.5
SEC22A-208ENST00000487572 RIMBP2O15034 1052 aa24.41■■□□□ 1.5
SEC22A-208ENST00000487572 LRRC24Q50LG9 513 aa24.41■■□□□ 1.5
SEC22A-208ENST00000487572 WTIPA6NIX2 430 aaPredicted RBP24.4■■□□□ 1.5
SEC22A-208ENST00000487572 TAF5LO75529 589 aa24.4■■□□□ 1.5
SEC22A-208ENST00000487572 ATP2B4P23634 1241 aa24.4■■□□□ 1.5
SEC22A-208ENST00000487572 WASHC4Q2M389 1173 aa24.4■■□□□ 1.5
SEC22A-208ENST00000487572 JDP2Q8WYK2 163 aa24.4■■□□□ 1.5
SEC22A-208ENST00000487572 EYA3Q99504 573 aa24.4■■□□□ 1.5
SEC22A-208ENST00000487572 SIL1Q9H173 461 aa24.4■■□□□ 1.5
SEC22A-208ENST00000487572 KCNJ4P48050 445 aa24.39■■□□□ 1.49
SEC22A-208ENST00000487572 PTPN12Q05209 780 aaKnown RBP24.39■■□□□ 1.49
SEC22A-208ENST00000487572 KIAA2012Q0VF49 1180 aa24.39■■□□□ 1.49
SEC22A-208ENST00000487572 MTX1Q13505 466 aa24.39■■□□□ 1.49
SEC22A-208ENST00000487572 PA2G4Q9UQ80 394 aaKnown RBP24.39■■□□□ 1.49
SEC22A-208ENST00000487572 COL4A5P29400 1685 aa24.39■■□□□ 1.49
SEC22A-208ENST00000487572 PNMA6EA0A0J9YXQ4 647 aa24.38■■□□□ 1.49
SEC22A-208ENST00000487572 NIM1KQ8IY84 436 aa24.38■■□□□ 1.49
SEC22A-208ENST00000487572 ZNF526Q8TF50 670 aaPredicted RBP24.38■■□□□ 1.49
SEC22A-208ENST00000487572 VPS33BQ9H267 617 aa24.37■■□□□ 1.49
SEC22A-208ENST00000487572 CHMP4BQ9H444 224 aaKnown RBP24.37■■□□□ 1.49
SEC22A-208ENST00000487572 ZBTB40Q9NUA8 1239 aa24.37■■□□□ 1.49
SEC22A-208ENST00000487572 RIPOR2Q9Y4F9 1068 aa24.37■■□□□ 1.49
SEC22A-208ENST00000487572 SUPT16HQ9Y5B9 1047 aaKnown RBP24.37■■□□□ 1.49
SEC22A-208ENST00000487572 DICER1Q9UPY3 1922 aaKnown RBP24.37■■□□□ 1.49
SEC22A-208ENST00000487572 ZNF804BA4D1E1 1349 aa24.36■■□□□ 1.49
SEC22A-208ENST00000487572 SNAP23O00161 211 aa24.36■■□□□ 1.49
SEC22A-208ENST00000487572 EYA2O00167 538 aa24.36■■□□□ 1.49
SEC22A-208ENST00000487572 METTL24Q5JXM2 366 aa24.36■■□□□ 1.49
SEC22A-208ENST00000487572 ZC3H12CQ9C0D7 883 aaKnown RBP24.36■■□□□ 1.49
SEC22A-208ENST00000487572 LEMD3Q9Y2U8 911 aa24.36■■□□□ 1.49
SEC22A-208ENST00000487572 MROH5Q6ZUA9 1318 aa24.35■■□□□ 1.49
SEC22A-208ENST00000487572 ZC3H4Q9UPT8 1303 aaKnown RBP24.35■■□□□ 1.49
SEC22A-208ENST00000487572 ATP8B2P98198 1209 aa24.35■■□□□ 1.49
SEC22A-208ENST00000487572 DOK7Q18PE1 504 aa24.35■■□□□ 1.49
SEC22A-208ENST00000487572 COPRSQ9NQ92 184 aa24.35■■□□□ 1.49
SEC22A-208ENST00000487572 G3V3G9 751 aa24.34■■□□□ 1.49
SEC22A-208ENST00000487572 DCAF8Q5TAQ9 597 aa24.34■■□□□ 1.49
SEC22A-208ENST00000487572 CEP85Q6P2H3 762 aa24.34■■□□□ 1.49
SEC22A-208ENST00000487572 DBNDD1Q9H9R9 158 aa24.34■■□□□ 1.49
SEC22A-208ENST00000487572 A0A1B0GUL6 1792 aa24.34■■□□□ 1.49
SEC22A-208ENST00000487572 ZNF541Q9H0D2 1346 aa24.34■■□□□ 1.49
SEC22A-208ENST00000487572 KLRK1P26718 216 aa24.33■■□□□ 1.49
SEC22A-208ENST00000487572 ATG9AQ7Z3C6 839 aa24.33■■□□□ 1.49
SEC22A-208ENST00000487572 CRBNQ96SW2 442 aa24.33■■□□□ 1.49
SEC22A-208ENST00000487572 MED23Q9ULK4 1368 aa24.32■■□□□ 1.48
SEC22A-208ENST00000487572 FZD9O00144 591 aa24.32■■□□□ 1.48
SEC22A-208ENST00000487572 EIF6P56537 245 aaKnown RBP24.32■■□□□ 1.48
SEC22A-208ENST00000487572 ZNF784Q8NCA9 323 aaPredicted RBP24.32■■□□□ 1.48
SEC22A-208ENST00000487572 ZNRF3Q9ULT6 936 aa24.32■■□□□ 1.48
SEC22A-208ENST00000487572 ECE2O60344 883 aa24.31■■□□□ 1.48
SEC22A-208ENST00000487572 CIAO1O76071 339 aa24.31■■□□□ 1.48
SEC22A-208ENST00000487572 POLA2Q14181 598 aa24.31■■□□□ 1.48
SEC22A-208ENST00000487572 DPY19L2Q6NUT2 758 aa24.31■■□□□ 1.48
SEC22A-208ENST00000487572 SSH3Q8TE77 659 aa24.31■■□□□ 1.48
SEC22A-208ENST00000487572 TXNRD3Q86VQ6 643 aa24.3■■□□□ 1.48
SEC22A-208ENST00000487572 FBXO3Q9UK99 471 aa24.3■■□□□ 1.48
SEC22A-208ENST00000487572 GLTPD2A6NH11 291 aa24.29■■□□□ 1.48
SEC22A-208ENST00000487572 DDNO94850 711 aaPredicted RBP24.29■■□□□ 1.48
SEC22A-208ENST00000487572 PDE8BO95263 885 aa24.29■■□□□ 1.48
SEC22A-208ENST00000487572 IL15P40933 162 aaPredicted RBP24.29■■□□□ 1.48
SEC22A-208ENST00000487572 VGLL2Q8N8G2 317 aa24.29■■□□□ 1.48
SEC22A-208ENST00000487572 GJA3Q9Y6H8 435 aa24.29■■□□□ 1.48
SEC22A-208ENST00000487572 KDM2BQ8NHM5 1336 aa24.29■■□□□ 1.48
SEC22A-208ENST00000487572 YDJCA8MPS7 323 aa24.28■■□□□ 1.48
SEC22A-208ENST00000487572 RAD17O75943 681 aa24.28■■□□□ 1.48
SEC22A-208ENST00000487572 G3BP1Q13283 466 aaKnown RBP eCLIP24.28■■□□□ 1.48
SEC22A-208ENST00000487572 GPBP1L1Q9HC44 474 aaPredicted RBP24.28■■□□□ 1.48
SEC22A-208ENST00000487572 CEP126Q9P2H0 1117 aa24.28■■□□□ 1.48
SEC22A-208ENST00000487572 OS9Q13438 667 aaPredicted RBP24.27■■□□□ 1.48
SEC22A-208ENST00000487572 UBE4AQ14139 1066 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms