RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 C9orf78Q9NZ63 289 aaPredicted RBP13.48□□□□□ -0.25
TOP3B-216ENST00000487485 TSKSQ9UJT2 592 aa13.48□□□□□ -0.25
TOP3B-216ENST00000487485 ABCC12Q96J65 1359 aa13.47□□□□□ -0.25
TOP3B-216ENST00000487485 MYH3P11055 1940 aa13.47□□□□□ -0.25
TOP3B-216ENST00000487485 IRS4O14654 1257 aaPredicted RBP13.47□□□□□ -0.25
TOP3B-216ENST00000487485 HCLS1P14317 486 aaPredicted RBP13.47□□□□□ -0.25
TOP3B-216ENST00000487485 LMOD1P29536 600 aaPredicted RBP13.47□□□□□ -0.25
TOP3B-216ENST00000487485 ECE1P42892 770 aa13.47□□□□□ -0.25
TOP3B-216ENST00000487485 RGS19P49795 217 aa13.47□□□□□ -0.25
TOP3B-216ENST00000487485 SCNN1DP51172 638 aa13.47□□□□□ -0.25
TOP3B-216ENST00000487485 MLLT1Q03111 559 aaPredicted RBP13.47□□□□□ -0.25
TOP3B-216ENST00000487485 CRY2Q49AN0 593 aa13.47□□□□□ -0.25
TOP3B-216ENST00000487485 INTS3Q68E01 1043 aaKnown RBP13.47□□□□□ -0.25
TOP3B-216ENST00000487485 UBE3BQ7Z3V4 1068 aa13.47□□□□□ -0.25
TOP3B-216ENST00000487485 FTSJ3Q8IY81 847 aaKnown RBP13.47□□□□□ -0.25
TOP3B-216ENST00000487485 NLRP3Q96P20 1036 aa13.47□□□□□ -0.25
TOP3B-216ENST00000487485 BEGAINQ9BUH8 593 aa13.47□□□□□ -0.25
TOP3B-216ENST00000487485 LTBP1Q14766 1721 aa13.47□□□□□ -0.25
TOP3B-216ENST00000487485 CASP8AP2Q9UKL3 1982 aa13.47□□□□□ -0.25
TOP3B-216ENST00000487485 CDHR2Q9BYE9 1310 aa13.46□□□□□ -0.25
TOP3B-216ENST00000487485 GRM8O00222 908 aa13.46□□□□□ -0.25
TOP3B-216ENST00000487485 AOC2O75106 756 aa13.46□□□□□ -0.25
TOP3B-216ENST00000487485 MS4A1P11836 297 aa13.46□□□□□ -0.25
TOP3B-216ENST00000487485 LARGE2Q8N3Y3 721 aa13.46□□□□□ -0.25
TOP3B-216ENST00000487485 TMEM57Q8N5G2 664 aa13.46□□□□□ -0.25
TOP3B-216ENST00000487485 RIC1Q4ADV7 1423 aa13.46□□□□□ -0.26
TOP3B-216ENST00000487485 NBPF7P0C2Y1 421 aaPredicted RBP13.45□□□□□ -0.26
TOP3B-216ENST00000487485 RLBP1P12271 317 aa13.45□□□□□ -0.26
TOP3B-216ENST00000487485 HSP90B1P14625 803 aaKnown RBP13.45□□□□□ -0.26
TOP3B-216ENST00000487485 CASP7P55210 303 aa13.45□□□□□ -0.26
TOP3B-216ENST00000487485 CC2D2BQ6DHV5 1058 aa13.45□□□□□ -0.26
TOP3B-216ENST00000487485 PANK1Q8TE04 598 aa13.45□□□□□ -0.26
TOP3B-216ENST00000487485 USP44Q9H0E7 712 aa13.45□□□□□ -0.26
TOP3B-216ENST00000487485 TLL2Q9Y6L7 1015 aa13.45□□□□□ -0.26
TOP3B-216ENST00000487485 TRPM7Q96QT4 1865 aa13.44□□□□□ -0.26
TOP3B-216ENST00000487485 PDE8AO60658 829 aa13.44□□□□□ -0.26
TOP3B-216ENST00000487485 HOXA10P31260 410 aaPredicted RBP13.44□□□□□ -0.26
TOP3B-216ENST00000487485 C3orf67Q6ZVT6 689 aa13.44□□□□□ -0.26
TOP3B-216ENST00000487485 USP50Q70EL3 339 aaPredicted RBP13.44□□□□□ -0.26
TOP3B-216ENST00000487485 UTYO14607 1347 aa13.43□□□□□ -0.26
TOP3B-216ENST00000487485 TAF1P21675 1872 aa13.43□□□□□ -0.26
TOP3B-216ENST00000487485 MAP2K2P36507 400 aa13.43□□□□□ -0.26
TOP3B-216ENST00000487485 RRP1P56182 461 aaKnown RBP13.43□□□□□ -0.26
TOP3B-216ENST00000487485 PDE3AQ14432 1141 aa13.43□□□□□ -0.26
TOP3B-216ENST00000487485 RPGRQ92834 1020 aaKnown RBP13.43□□□□□ -0.26
TOP3B-216ENST00000487485 SF3B3Q15393 1217 aaKnown RBP13.42□□□□□ -0.26
TOP3B-216ENST00000487485 C20orf194Q5TEA3 1177 aa13.42□□□□□ -0.26
TOP3B-216ENST00000487485 SAPCD2Q86UD0 394 aa13.42□□□□□ -0.26
TOP3B-216ENST00000487485 ITPRIPQ8IWB1 547 aa13.42□□□□□ -0.26
TOP3B-216ENST00000487485 NIM1KQ8IY84 436 aa13.42□□□□□ -0.26
TOP3B-216ENST00000487485 PLA2G12BQ9BX93 195 aa13.42□□□□□ -0.26
TOP3B-216ENST00000487485 MCOLN1Q9GZU1 580 aa13.42□□□□□ -0.26
TOP3B-216ENST00000487485 CELF2O95319 508 aaKnown RBP13.41□□□□□ -0.26
TOP3B-216ENST00000487485 FOXO4P98177 505 aa13.41□□□□□ -0.26
TOP3B-216ENST00000487485 GRIPAP1Q4V328 841 aa13.41□□□□□ -0.26
TOP3B-216ENST00000487485 TTLL11Q8NHH1 800 aa13.41□□□□□ -0.26
TOP3B-216ENST00000487485 RBM17Q96I25 401 aaKnown RBP13.41□□□□□ -0.26
TOP3B-216ENST00000487485 SUCLG2Q96I99 432 aa13.41□□□□□ -0.26
TOP3B-216ENST00000487485 CRAMP1Q96RY5 1269 aa13.41□□□□□ -0.26
TOP3B-216ENST00000487485 MEIS3Q99687 375 aa13.41□□□□□ -0.26
TOP3B-216ENST00000487485 ADARB2Q9NS39 739 aaKnown RBP13.41□□□□□ -0.26
TOP3B-216ENST00000487485 GPRC5DQ9NZD1 345 aa13.41□□□□□ -0.26
TOP3B-216ENST00000487485 SUPT16HQ9Y5B9 1047 aaKnown RBP13.41□□□□□ -0.26
TOP3B-216ENST00000487485 THSD7BQ9C0I4 1608 aa13.4□□□□□ -0.26
TOP3B-216ENST00000487485 PPEF1O14829 653 aaPredicted RBP13.4□□□□□ -0.26
TOP3B-216ENST00000487485 ZBTB7BO15156 539 aaPredicted RBP13.4□□□□□ -0.26
TOP3B-216ENST00000487485 PPIP5K2O43314 1243 aa13.4□□□□□ -0.26
TOP3B-216ENST00000487485 GNAI3P08754 354 aa13.4□□□□□ -0.26
TOP3B-216ENST00000487485 UBTFL1P0CB47 393 aaPredicted RBP13.4□□□□□ -0.26
TOP3B-216ENST00000487485 CTSWP56202 376 aa13.4□□□□□ -0.26
TOP3B-216ENST00000487485 CXCL9Q07325 125 aa13.4□□□□□ -0.26
TOP3B-216ENST00000487485 MVPQ14764 893 aaKnown RBP13.4□□□□□ -0.26
TOP3B-216ENST00000487485 AOC3Q16853 763 aa13.4□□□□□ -0.26
TOP3B-216ENST00000487485 EPHA10Q5JZY3 1008 aa13.4□□□□□ -0.26
TOP3B-216ENST00000487485 KAZALD1Q96I82 304 aa13.4□□□□□ -0.26
TOP3B-216ENST00000487485 CCDC85AQ96PX6 553 aaPredicted RBP13.4□□□□□ -0.26
TOP3B-216ENST00000487485 GLIS2Q9BZE0 524 aaPredicted RBP13.4□□□□□ -0.26
TOP3B-216ENST00000487485 COG6Q9Y2V7 657 aa13.4□□□□□ -0.26
TOP3B-216ENST00000487485 CSF1RP07333 972 aa13.39□□□□□ -0.27
TOP3B-216ENST00000487485 CCDC152Q4G0S7 254 aa13.39□□□□□ -0.27
TOP3B-216ENST00000487485 DDX46Q7L014 1031 aaKnown RBP13.39□□□□□ -0.27
TOP3B-216ENST00000487485 HDAC5Q9UQL6 1122 aa13.39□□□□□ -0.27
TOP3B-216ENST00000487485 TNRC18O15417 2968 aaPredicted RBP13.38□□□□□ -0.27
TOP3B-216ENST00000487485 CA12O43570 354 aa13.38□□□□□ -0.27
TOP3B-216ENST00000487485 GMPSP49915 693 aaPredicted RBP13.38□□□□□ -0.27
TOP3B-216ENST00000487485 HIRAP54198 1017 aaPredicted RBP13.38□□□□□ -0.27
TOP3B-216ENST00000487485 LMBR1LQ6UX01 489 aa13.38□□□□□ -0.27
TOP3B-216ENST00000487485 ZIC5Q96T25 663 aa13.38□□□□□ -0.27
TOP3B-216ENST00000487485 BICC1Q9H694 974 aaKnown RBP13.38□□□□□ -0.27
TOP3B-216ENST00000487485 PGAP2Q9UHJ9 254 aa13.38□□□□□ -0.27
TOP3B-216ENST00000487485 ZNRF3Q9ULT6 936 aa13.38□□□□□ -0.27
TOP3B-216ENST00000487485 DDX19BQ9UMR2 479 aa13.38□□□□□ -0.27
TOP3B-216ENST00000487485 LRRFIP2Q9Y608 721 aaKnown RBP13.38□□□□□ -0.27
TOP3B-216ENST00000487485 SPEF2Q9C093 1822 aa13.37□□□□□ -0.27
TOP3B-216ENST00000487485 DGKZQ13574 1117 aa13.37□□□□□ -0.27
TOP3B-216ENST00000487485 CIAPIN1Q6FI81 312 aa13.37□□□□□ -0.27
TOP3B-216ENST00000487485 HHIPL1Q96JK4 782 aa13.37□□□□□ -0.27
TOP3B-216ENST00000487485 GREM2Q9H772 168 aa13.37□□□□□ -0.27
TOP3B-216ENST00000487485 ZNF408Q9H9D4 720 aa13.37□□□□□ -0.27
TOP3B-216ENST00000487485 SEC31BQ9NQW1 1179 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms