RNA–Protein interactions for RNA: ENST00000487384.5

HOXA9-204, Transcript of homeobox A9, humanhuman

TSL 3

Gene HOXA9, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-204ENST00000487384 DPF2Q92785 391 aa11.01□□□□□ -0.65
HOXA9-204ENST00000487384 CELF1Q92879 486 aaKnown RBP11.01□□□□□ -0.65
HOXA9-204ENST00000487384 RNF186Q9NXI6 227 aa11.01□□□□□ -0.65
HOXA9-204ENST00000487384 POLLQ9UGP5 575 aa11.01□□□□□ -0.65
HOXA9-204ENST00000487384 ASTN2O75129 1339 aaPredicted RBP11.01□□□□□ -0.65
HOXA9-204ENST00000487384 RIPK4P57078 832 aa11□□□□□ -0.65
HOXA9-204ENST00000487384 GPSM2P81274 684 aa11□□□□□ -0.65
HOXA9-204ENST00000487384 KRT24Q2M2I5 525 aa11□□□□□ -0.65
HOXA9-204ENST00000487384 CCDC102AQ96A19 550 aa11□□□□□ -0.65
HOXA9-204ENST00000487384 FAM89AQ96GI7 184 aa11□□□□□ -0.65
HOXA9-204ENST00000487384 SAGE1Q9NXZ1 904 aa11□□□□□ -0.65
HOXA9-204ENST00000487384 RTL9Q8NET4 1388 aa11□□□□□ -0.65
HOXA9-204ENST00000487384 ATP5J2-PTCD1G3V325 749 aa10.99□□□□□ -0.65
HOXA9-204ENST00000487384 KIF4BQ2VIQ3 1234 aa10.99□□□□□ -0.65
HOXA9-204ENST00000487384 TMC4Q7Z404 712 aa10.99□□□□□ -0.65
HOXA9-204ENST00000487384 CSRNP1Q96S65 589 aa10.99□□□□□ -0.65
HOXA9-204ENST00000487384 GGA3Q9NZ52 723 aa10.99□□□□□ -0.65
HOXA9-204ENST00000487384 PSME4Q14997 1843 aa10.98□□□□□ -0.65
HOXA9-204ENST00000487384 SLC10A3P09131 477 aa10.98□□□□□ -0.65
HOXA9-204ENST00000487384 RPS12P25398 132 aaKnown RBP10.98□□□□□ -0.65
HOXA9-204ENST00000487384 SULF1Q8IWU6 871 aa10.98□□□□□ -0.65
HOXA9-204ENST00000487384 CDCA5Q96FF9 252 aa10.98□□□□□ -0.65
HOXA9-204ENST00000487384 PNNQ9H307 717 aaKnown RBP10.98□□□□□ -0.65
HOXA9-204ENST00000487384 CHPF2Q9P2E5 772 aa10.98□□□□□ -0.65
HOXA9-204ENST00000487384 SCAF8Q9UPN6 1271 aaKnown RBP10.98□□□□□ -0.65
HOXA9-204ENST00000487384 LAS1LQ9Y4W2 734 aaKnown RBP10.98□□□□□ -0.65
HOXA9-204ENST00000487384 NEUROD2Q15784 382 aa10.97□□□□□ -0.65
HOXA9-204ENST00000487384 CTU1Q7Z7A3 348 aaKnown RBP10.97□□□□□ -0.65
HOXA9-204ENST00000487384 TBC1D16Q8TBP0 767 aa10.97□□□□□ -0.65
HOXA9-204ENST00000487384 EYA3Q99504 573 aa10.97□□□□□ -0.65
HOXA9-204ENST00000487384 G3V3G9 751 aa10.96□□□□□ -0.65
HOXA9-204ENST00000487384 VIL1P09327 827 aaKnown RBP10.96□□□□□ -0.65
HOXA9-204ENST00000487384 TMPOP42166 694 aaKnown RBP10.96□□□□□ -0.65
HOXA9-204ENST00000487384 SCARF1Q14162 830 aa10.96□□□□□ -0.65
HOXA9-204ENST00000487384 SF3B3Q15393 1217 aaKnown RBP10.96□□□□□ -0.65
HOXA9-204ENST00000487384 DCAF8Q5TAQ9 597 aa10.96□□□□□ -0.65
HOXA9-204ENST00000487384 ANGEL2Q5VTE6 544 aaKnown RBP10.96□□□□□ -0.65
HOXA9-204ENST00000487384 ANKRD13DQ6ZTN6 518 aa10.96□□□□□ -0.65
HOXA9-204ENST00000487384 MOB2Q70IA6 237 aa10.96□□□□□ -0.65
HOXA9-204ENST00000487384 RASAL3Q86YV0 1011 aa10.96□□□□□ -0.65
HOXA9-204ENST00000487384 ZC3H12CQ9C0D7 883 aaKnown RBP10.96□□□□□ -0.65
HOXA9-204ENST00000487384 HTTP42858 3142 aa10.96□□□□□ -0.66
HOXA9-204ENST00000487384 BRCA2P51587 3418 aa10.96□□□□□ -0.66
HOXA9-204ENST00000487384 SPEF2Q9C093 1822 aa10.95□□□□□ -0.66
HOXA9-204ENST00000487384 IRS4O14654 1257 aaPredicted RBP10.95□□□□□ -0.66
HOXA9-204ENST00000487384 UFL1O94874 794 aa10.95□□□□□ -0.66
HOXA9-204ENST00000487384 RPS8P62241 208 aaKnown RBP10.95□□□□□ -0.66
HOXA9-204ENST00000487384 HDGFL1Q5TGJ6 251 aa10.95□□□□□ -0.66
HOXA9-204ENST00000487384 PLBD2Q8NHP8 589 aa10.95□□□□□ -0.66
HOXA9-204ENST00000487384 ISCA1Q9BUE6 129 aa10.95□□□□□ -0.66
HOXA9-204ENST00000487384 SEC31BQ9NQW1 1179 aa10.95□□□□□ -0.66
HOXA9-204ENST00000487384 BABAM1Q9NWV8 329 aa10.95□□□□□ -0.66
HOXA9-204ENST00000487384 ANKIB1Q9P2G1 1089 aa10.95□□□□□ -0.66
HOXA9-204ENST00000487384 HPS5Q9UPZ3 1129 aa10.95□□□□□ -0.66
HOXA9-204ENST00000487384 PAPPA2Q9BXP8 1791 aa10.95□□□□□ -0.66
HOXA9-204ENST00000487384 TBC1D8O95759 1140 aa10.94□□□□□ -0.66
HOXA9-204ENST00000487384 PRPF38BQ5VTL8 546 aaKnown RBP10.94□□□□□ -0.66
HOXA9-204ENST00000487384 PRAMEF18Q5VWM3 479 aa10.94□□□□□ -0.66
HOXA9-204ENST00000487384 CCDC146Q8IYE0 955 aa10.94□□□□□ -0.66
HOXA9-204ENST00000487384 CCDC85AQ96PX6 553 aaPredicted RBP10.94□□□□□ -0.66
HOXA9-204ENST00000487384 HDAC9Q9UKV0 1011 aa10.94□□□□□ -0.66
HOXA9-204ENST00000487384 KIAA0100Q14667 2235 aaKnown RBP10.93□□□□□ -0.66
HOXA9-204ENST00000487384 UBE2Q2LH0YL09 131 aa10.93□□□□□ -0.66
HOXA9-204ENST00000487384 LMOD3Q0VAK6 560 aa10.93□□□□□ -0.66
HOXA9-204ENST00000487384 MKRN3Q13064 507 aaKnown RBP10.93□□□□□ -0.66
HOXA9-204ENST00000487384 RSBN1LQ6PCB5 846 aaPredicted RBP10.93□□□□□ -0.66
HOXA9-204ENST00000487384 ZNF296Q8WUU4 475 aaPredicted RBP10.93□□□□□ -0.66
HOXA9-204ENST00000487384 JARID2Q92833 1246 aaPredicted RBP10.93□□□□□ -0.66
HOXA9-204ENST00000487384 GGA1Q9UJY5 639 aa10.93□□□□□ -0.66
HOXA9-204ENST00000487384 CHL1O00533 1208 aa10.92□□□□□ -0.66
HOXA9-204ENST00000487384 ZNF280AP59817 542 aaPredicted RBP10.92□□□□□ -0.66
HOXA9-204ENST00000487384 TTLL12Q14166 644 aaPredicted RBP10.92□□□□□ -0.66
HOXA9-204ENST00000487384 MYOZ2Q9NPC6 264 aa10.92□□□□□ -0.66
HOXA9-204ENST00000487384 PODXL2Q9NZ53 605 aa10.92□□□□□ -0.66
HOXA9-204ENST00000487384 DBF4Q9UBU7 674 aaPredicted RBP10.92□□□□□ -0.66
HOXA9-204ENST00000487384 MYH3P11055 1940 aa10.92□□□□□ -0.66
HOXA9-204ENST00000487384 WTIPA6NIX2 430 aaPredicted RBP10.91□□□□□ -0.66
HOXA9-204ENST00000487384 USP17L8P0C7I0 530 aa10.91□□□□□ -0.66
HOXA9-204ENST00000487384 RIC3Q7Z5B4 369 aa10.91□□□□□ -0.66
HOXA9-204ENST00000487384 REM2Q8IYK8 340 aaPredicted RBP10.91□□□□□ -0.66
HOXA9-204ENST00000487384 AGBL3Q8NEM8 1001 aa10.91□□□□□ -0.66
HOXA9-204ENST00000487384 FKBP1BP68106 108 aa10.9□□□□□ -0.66
HOXA9-204ENST00000487384 NBPF9Q3BBW0 867 aa10.9□□□□□ -0.66
HOXA9-204ENST00000487384 DUSP27Q5VZP5 1158 aa10.9□□□□□ -0.66
HOXA9-204ENST00000487384 ZBTB38Q8NAP3 1195 aaPredicted RBP10.9□□□□□ -0.66
HOXA9-204ENST00000487384 FBXW7Q969H0 707 aa10.9□□□□□ -0.66
HOXA9-204ENST00000487384 GMLQ99445 158 aa10.9□□□□□ -0.66
HOXA9-204ENST00000487384 MYD88Q99836 296 aa10.9□□□□□ -0.66
HOXA9-204ENST00000487384 MXD3Q9BW11 206 aa10.9□□□□□ -0.66
HOXA9-204ENST00000487384 HYPKQ9NX55 129 aa10.9□□□□□ -0.66
HOXA9-204ENST00000487384 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.9□□□□□ -0.66
HOXA9-204ENST00000487384 TRIM35Q9UPQ4 493 aa10.9□□□□□ -0.66
HOXA9-204ENST00000487384 ZNF646O15015 1829 aaPredicted RBP10.9□□□□□ -0.66
HOXA9-204ENST00000487384 PITPNM2Q9BZ72 1349 aa10.89□□□□□ -0.67
HOXA9-204ENST00000487384 USP17L3A6NCW0 530 aa10.89□□□□□ -0.67
HOXA9-204ENST00000487384 USP17L4A6NCW7 530 aa10.89□□□□□ -0.67
HOXA9-204ENST00000487384 GPR25O00155 361 aa10.89□□□□□ -0.67
HOXA9-204ENST00000487384 TRIM28Q13263 835 aaKnown RBP10.89□□□□□ -0.67
HOXA9-204ENST00000487384 PRKG1Q13976 671 aa10.89□□□□□ -0.67
HOXA9-204ENST00000487384 PKN2Q16513 984 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms