RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 LMAN1P49257 510 aa16.84■□□□□ 0.29
EPHB4-206ENST00000487222 JARID2Q92833 1246 aaPredicted RBP16.84■□□□□ 0.29
EPHB4-206ENST00000487222 DMRT2Q9Y5R5 561 aa16.84■□□□□ 0.29
EPHB4-206ENST00000487222 IL15P40933 162 aaPredicted RBP16.84■□□□□ 0.29
EPHB4-206ENST00000487222 TYRO3Q06418 890 aa16.84■□□□□ 0.29
EPHB4-206ENST00000487222 TTC12Q9H892 705 aaPredicted RBP16.84■□□□□ 0.29
EPHB4-206ENST00000487222 CKAP4Q07065 602 aaKnown RBP16.83■□□□□ 0.29
EPHB4-206ENST00000487222 RNF187Q5TA31 235 aaPredicted RBP16.83■□□□□ 0.29
EPHB4-206ENST00000487222 PLEKHM2Q8IWE5 1019 aa16.83■□□□□ 0.29
EPHB4-206ENST00000487222 AOPEPQ8N6M6 819 aa16.83■□□□□ 0.29
EPHB4-206ENST00000487222 EHMT1Q9H9B1 1298 aa16.83■□□□□ 0.29
EPHB4-206ENST00000487222 ARFGAP3Q9NP61 516 aa16.83■□□□□ 0.29
EPHB4-206ENST00000487222 KIAA0556O60303 1618 aa16.83■□□□□ 0.28
EPHB4-206ENST00000487222 TRIM21P19474 475 aaKnown RBP16.83■□□□□ 0.28
EPHB4-206ENST00000487222 SPTY2D1Q68D10 685 aaPredicted RBP16.83■□□□□ 0.28
EPHB4-206ENST00000487222 COPS6Q7L5N1 327 aa16.83■□□□□ 0.28
EPHB4-206ENST00000487222 CCDC175P0C221 793 aa16.83■□□□□ 0.28
EPHB4-206ENST00000487222 PPP4R3AQ6IN85 833 aa16.83■□□□□ 0.28
EPHB4-206ENST00000487222 SRRTQ9BXP5 876 aaKnown RBP16.83■□□□□ 0.28
EPHB4-206ENST00000487222 NOP2P46087 812 aaKnown RBP16.83■□□□□ 0.28
EPHB4-206ENST00000487222 AKAP4Q5JQC9 854 aa16.83■□□□□ 0.28
EPHB4-206ENST00000487222 RRAGBQ5VZM2 374 aa16.83■□□□□ 0.28
EPHB4-206ENST00000487222 STXBP4Q6ZWJ1 553 aa16.83■□□□□ 0.28
EPHB4-206ENST00000487222 EIF2AK4Q9P2K8 1649 aaKnown RBP16.82■□□□□ 0.28
EPHB4-206ENST00000487222 CYLC1P35663 651 aaPredicted RBP16.82■□□□□ 0.28
EPHB4-206ENST00000487222 AK2P54819 239 aa16.82■□□□□ 0.28
EPHB4-206ENST00000487222 ATP2B3Q16720 1220 aa16.82■□□□□ 0.28
EPHB4-206ENST00000487222 LINS1Q8NG48 757 aa16.82■□□□□ 0.28
EPHB4-206ENST00000487222 ESR2Q92731 530 aa16.82■□□□□ 0.28
EPHB4-206ENST00000487222 ZMYND15Q9H091 742 aa16.82■□□□□ 0.28
EPHB4-206ENST00000487222 NMIQ13287 307 aaPredicted RBP16.82■□□□□ 0.28
EPHB4-206ENST00000487222 SHANK2Q9UPX8 1470 aa16.82■□□□□ 0.28
EPHB4-206ENST00000487222 CTTNBP2Q8WZ74 1663 aa16.82■□□□□ 0.28
EPHB4-206ENST00000487222 NEBLO76041 1014 aa16.82■□□□□ 0.28
EPHB4-206ENST00000487222 RTN1Q16799 776 aa16.82■□□□□ 0.28
EPHB4-206ENST00000487222 CTNNBL1Q8WYA6 563 aaPredicted RBP16.82■□□□□ 0.28
EPHB4-206ENST00000487222 RPGRQ92834 1020 aaKnown RBP16.82■□□□□ 0.28
EPHB4-206ENST00000487222 EXOC1Q9NV70 894 aa16.82■□□□□ 0.28
EPHB4-206ENST00000487222 FLT4P35916 1363 aa16.82■□□□□ 0.28
EPHB4-206ENST00000487222 CTAGE15A4D2H0 777 aa16.81■□□□□ 0.28
EPHB4-206ENST00000487222 CTAGE8P0CG41 777 aa16.81■□□□□ 0.28
EPHB4-206ENST00000487222 LMBR1LQ6UX01 489 aa16.81■□□□□ 0.28
EPHB4-206ENST00000487222 CTAGE6Q86UF2 777 aa16.81■□□□□ 0.28
EPHB4-206ENST00000487222 CTAGE4Q8IX94 777 aa16.81■□□□□ 0.28
EPHB4-206ENST00000487222 CRNKL1Q9BZJ0 848 aaKnown RBP16.81■□□□□ 0.28
EPHB4-206ENST00000487222 MSH6P52701 1360 aa16.81■□□□□ 0.28
EPHB4-206ENST00000487222 SPTLC2O15270 562 aa16.81■□□□□ 0.28
EPHB4-206ENST00000487222 WDR62O43379 1518 aa16.81■□□□□ 0.28
EPHB4-206ENST00000487222 HOOK3Q86VS8 718 aa16.81■□□□□ 0.28
EPHB4-206ENST00000487222 TSPYL6Q8N831 410 aa16.81■□□□□ 0.28
EPHB4-206ENST00000487222 SLU7O95391 586 aaKnown RBP16.81■□□□□ 0.28
EPHB4-206ENST00000487222 IFI16Q16666 785 aaKnown RBP16.81■□□□□ 0.28
EPHB4-206ENST00000487222 ZGPATQ8N5A5 531 aaKnown RBP16.81■□□□□ 0.28
EPHB4-206ENST00000487222 ZCRB1Q8TBF4 217 aaKnown RBP16.81■□□□□ 0.28
EPHB4-206ENST00000487222 TRERF1Q96PN7 1200 aa16.81■□□□□ 0.28
EPHB4-206ENST00000487222 SYT1P21579 422 aa16.8■□□□□ 0.28
EPHB4-206ENST00000487222 USP26Q9BXU7 913 aa16.8■□□□□ 0.28
EPHB4-206ENST00000487222 DNAI2Q9GZS0 605 aa16.8■□□□□ 0.28
EPHB4-206ENST00000487222 VAT1LQ9HCJ6 419 aa16.8■□□□□ 0.28
EPHB4-206ENST00000487222 SEC24BO95487 1268 aa16.8■□□□□ 0.28
EPHB4-206ENST00000487222 AFMP43652 599 aa16.8■□□□□ 0.28
EPHB4-206ENST00000487222 MACROD2A1Z1Q3 448 aa16.8■□□□□ 0.28
EPHB4-206ENST00000487222 MAATS1Q7Z4T9 603 aa16.8■□□□□ 0.28
EPHB4-206ENST00000487222 KRI1Q8N9T8 703 aaKnown RBP16.8■□□□□ 0.28
EPHB4-206ENST00000487222 RTL1A6NKG5 1358 aa16.8■□□□□ 0.28
EPHB4-206ENST00000487222 ARHGEF12Q9NZN5 1544 aa16.8■□□□□ 0.28
EPHB4-206ENST00000487222 GOLGA6L10A0A0M3HER8 536 aa16.8■□□□□ 0.28
EPHB4-206ENST00000487222 NPATQ14207 1427 aa16.8■□□□□ 0.28
EPHB4-206ENST00000487222 ADAMTS12P58397 1594 aa16.79■□□□□ 0.28
EPHB4-206ENST00000487222 DCAF8L1A6NGE4 600 aa16.79■□□□□ 0.28
EPHB4-206ENST00000487222 MYO1BO43795 1136 aa16.79■□□□□ 0.28
EPHB4-206ENST00000487222 CHMLP26374 656 aa16.79■□□□□ 0.28
EPHB4-206ENST00000487222 ZRANB1Q9UGI0 708 aa16.79■□□□□ 0.28
EPHB4-206ENST00000487222 MARCKSP29966 332 aaPredicted RBP16.79■□□□□ 0.28
EPHB4-206ENST00000487222 ZHX1Q9UKY1 873 aaPredicted RBP16.79■□□□□ 0.28
EPHB4-206ENST00000487222 PRPF4BQ13523 1007 aaKnown RBP16.79■□□□□ 0.28
EPHB4-206ENST00000487222 RAD50Q92878 1312 aa16.79■□□□□ 0.28
EPHB4-206ENST00000487222 PRC1O43663 620 aa16.79■□□□□ 0.28
EPHB4-206ENST00000487222 MAPK8IP2Q13387 824 aaPredicted RBP16.79■□□□□ 0.28
EPHB4-206ENST00000487222 CREB3L3Q68CJ9 461 aa16.79■□□□□ 0.28
EPHB4-206ENST00000487222 CARD14Q9BXL6 1004 aa16.79■□□□□ 0.28
EPHB4-206ENST00000487222 SOS1Q07889 1333 aaPredicted RBP16.79■□□□□ 0.28
EPHB4-206ENST00000487222 STAT6P42226 847 aa16.78■□□□□ 0.28
EPHB4-206ENST00000487222 MTHFSDQ2M296 383 aaKnown RBP16.78■□□□□ 0.28
EPHB4-206ENST00000487222 PSMA7O14818 248 aa16.78■□□□□ 0.28
EPHB4-206ENST00000487222 LIG1P18858 919 aa16.78■□□□□ 0.28
EPHB4-206ENST00000487222 CCDC152Q4G0S7 254 aa16.78■□□□□ 0.28
EPHB4-206ENST00000487222 PAG1Q9NWQ8 432 aa16.78■□□□□ 0.28
EPHB4-206ENST00000487222 GNAQP50148 359 aa16.78■□□□□ 0.28
EPHB4-206ENST00000487222 IFIT1BQ5T764 474 aaKnown RBP16.78■□□□□ 0.28
EPHB4-206ENST00000487222 STX8Q9UNK0 236 aa16.78■□□□□ 0.28
EPHB4-206ENST00000487222 PA2G4Q9UQ80 394 aaKnown RBP16.78■□□□□ 0.28
EPHB4-206ENST00000487222 LMOD1P29536 600 aaPredicted RBP16.78■□□□□ 0.28
EPHB4-206ENST00000487222 PER1O15534 1290 aaPredicted RBP16.77■□□□□ 0.28
EPHB4-206ENST00000487222 SLC39A6Q13433 755 aa16.77■□□□□ 0.28
EPHB4-206ENST00000487222 SLC9C2Q5TAH2 1124 aa16.77■□□□□ 0.28
EPHB4-206ENST00000487222 SLC4A4Q9Y6R1 1079 aa16.77■□□□□ 0.28
EPHB4-206ENST00000487222 C6orf229H3BNL8 230 aa16.77■□□□□ 0.28
EPHB4-206ENST00000487222 HSF2BPO75031 334 aa16.77■□□□□ 0.28
EPHB4-206ENST00000487222 CCDC172P0C7W6 258 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms