RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 RSPH14Q9UHP6 348 aa8.84□□□□□ -0.99
COL6A4P1-202ENST00000487147 MORC2Q9Y6X9 1032 aaPredicted RBP8.84□□□□□ -0.99
COL6A4P1-202ENST00000487147 ALDH1L1O75891 902 aa8.84□□□□□ -0.99
COL6A4P1-202ENST00000487147 USP8P40818 1118 aa8.84□□□□□ -0.99
COL6A4P1-202ENST00000487147 ETF1P62495 437 aaKnown RBP8.84□□□□□ -0.99
COL6A4P1-202ENST00000487147 CCDC158Q5M9N0 1113 aa8.84□□□□□ -0.99
COL6A4P1-202ENST00000487147 SLC26A8Q96RN1 970 aa8.84□□□□□ -0.99
COL6A4P1-202ENST00000487147 GOLIM4O00461 696 aa8.84□□□□□ -1
COL6A4P1-202ENST00000487147 MARCKSP29966 332 aaPredicted RBP8.84□□□□□ -1
COL6A4P1-202ENST00000487147 ARID5BQ14865 1188 aa8.84□□□□□ -1
COL6A4P1-202ENST00000487147 KMT5BQ4FZB7 885 aa8.84□□□□□ -1
COL6A4P1-202ENST00000487147 MCMDC2Q4G0Z9 681 aa8.84□□□□□ -1
COL6A4P1-202ENST00000487147 RAB11FIP4Q86YS3 637 aa8.84□□□□□ -1
COL6A4P1-202ENST00000487147 RAPGEF4Q8WZA2 1011 aa8.84□□□□□ -1
COL6A4P1-202ENST00000487147 SPHKAPQ2M3C7 1700 aa8.83□□□□□ -1
COL6A4P1-202ENST00000487147 CDC42BPBQ9Y5S2 1711 aa8.83□□□□□ -1
COL6A4P1-202ENST00000487147 TET3O43151 1660 aa8.83□□□□□ -1
COL6A4P1-202ENST00000487147 GRM8O00222 908 aa8.83□□□□□ -1
COL6A4P1-202ENST00000487147 RDXP35241 583 aaKnown RBP8.83□□□□□ -1
COL6A4P1-202ENST00000487147 FANCCQ00597 558 aa8.83□□□□□ -1
COL6A4P1-202ENST00000487147 PPP2R3AQ06190 1150 aa8.83□□□□□ -1
COL6A4P1-202ENST00000487147 ZSCAN26Q16670 478 aa8.83□□□□□ -1
COL6A4P1-202ENST00000487147 DHX32Q7L7V1 743 aaKnown RBP8.83□□□□□ -1
COL6A4P1-202ENST00000487147 SHROOM2Q13796 1616 aa8.83□□□□□ -1
COL6A4P1-202ENST00000487147 ABCA6Q8N139 1617 aa8.83□□□□□ -1
COL6A4P1-202ENST00000487147 SMC1AQ14683 1233 aaKnown RBP8.83□□□□□ -1
COL6A4P1-202ENST00000487147 KARSQ15046 597 aaKnown RBP8.83□□□□□ -1
COL6A4P1-202ENST00000487147 C11orf57Q6ZUT1 292 aaPredicted RBP8.83□□□□□ -1
COL6A4P1-202ENST00000487147 SMARCC1Q92922 1105 aaPredicted RBP8.83□□□□□ -1
COL6A4P1-202ENST00000487147 TTC14Q96N46 770 aa8.83□□□□□ -1
COL6A4P1-202ENST00000487147 MAP3K19Q56UN5 1328 aa8.83□□□□□ -1
COL6A4P1-202ENST00000487147 PNPLA6Q8IY17 1366 aa8.83□□□□□ -1
COL6A4P1-202ENST00000487147 KIAA0754O94854 1291 aa8.83□□□□□ -1
COL6A4P1-202ENST00000487147 PIP4K2AP48426 406 aaPredicted RBP8.83□□□□□ -1
COL6A4P1-202ENST00000487147 CWF19L2Q2TBE0 894 aaKnown RBP8.83□□□□□ -1
COL6A4P1-202ENST00000487147 MAP9Q49MG5 647 aa8.83□□□□□ -1
COL6A4P1-202ENST00000487147 TTC39AQ5SRH9 613 aa8.83□□□□□ -1
COL6A4P1-202ENST00000487147 TRIM22Q8IYM9 498 aa8.83□□□□□ -1
COL6A4P1-202ENST00000487147 MYD88Q99836 296 aa8.83□□□□□ -1
COL6A4P1-202ENST00000487147 PHACTR2O75167 634 aa8.82□□□□□ -1
COL6A4P1-202ENST00000487147 XBP1P17861 261 aa8.82□□□□□ -1
COL6A4P1-202ENST00000487147 MYL5Q02045 173 aa8.82□□□□□ -1
COL6A4P1-202ENST00000487147 CTR9Q6PD62 1173 aa8.82□□□□□ -1
COL6A4P1-202ENST00000487147 CHST3Q7LGC8 479 aa8.82□□□□□ -1
COL6A4P1-202ENST00000487147 CCDC148Q8NFR7 591 aa8.82□□□□□ -1
COL6A4P1-202ENST00000487147 IFIT1P09914 478 aaKnown RBP8.82□□□□□ -1
COL6A4P1-202ENST00000487147 HAND2P61296 217 aa8.82□□□□□ -1
COL6A4P1-202ENST00000487147 CCDC144BQ3MJ40 725 aa8.82□□□□□ -1
COL6A4P1-202ENST00000487147 KSR2Q6VAB6 950 aa8.82□□□□□ -1
COL6A4P1-202ENST00000487147 PLA2G4DQ86XP0 818 aa8.82□□□□□ -1
COL6A4P1-202ENST00000487147 CCDC144CPQ8IYA2 1237 aa8.82□□□□□ -1
COL6A4P1-202ENST00000487147 ZNF526Q8TF50 670 aaPredicted RBP8.82□□□□□ -1
COL6A4P1-202ENST00000487147 LLPHQ9BRT6 129 aaKnown RBP8.82□□□□□ -1
COL6A4P1-202ENST00000487147 PUF60Q9UHX1 559 aaKnown RBP8.82□□□□□ -1
COL6A4P1-202ENST00000487147 RPAP1Q9BWH6 1393 aaPredicted RBP8.82□□□□□ -1
COL6A4P1-202ENST00000487147 CPSF1Q10570 1443 aaKnown RBP8.82□□□□□ -1
COL6A4P1-202ENST00000487147 A0A087WWV3 80 aa8.82□□□□□ -1
COL6A4P1-202ENST00000487147 USP28Q96RU2 1077 aa8.82□□□□□ -1
COL6A4P1-202ENST00000487147 BAG1Q99933 345 aaPredicted RBP8.82□□□□□ -1
COL6A4P1-202ENST00000487147 LRRC7Q96NW7 1537 aa8.82□□□□□ -1
COL6A4P1-202ENST00000487147 FLT4P35916 1363 aa8.82□□□□□ -1
COL6A4P1-202ENST00000487147 KLF18A0A0U1RQI7 1052 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 PSDA5PKW4 1024 aaPredicted RBP8.81□□□□□ -1
COL6A4P1-202ENST00000487147 ZBTB22O15209 634 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 CCDC175P0C221 793 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 CLCN6P51797 869 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 HNRNPH2P55795 449 aaKnown RBP8.81□□□□□ -1
COL6A4P1-202ENST00000487147 SART3Q15020 963 aaKnown RBP8.81□□□□□ -1
COL6A4P1-202ENST00000487147 NAA16Q6N069 864 aaPredicted RBP8.81□□□□□ -1
COL6A4P1-202ENST00000487147 GPATCH11Q8N954 259 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 PPP1R13BQ96KQ4 1090 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 MPHOSPH8Q99549 860 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 RAI14Q9P0K7 980 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 CEP126Q9P2H0 1117 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 CEP152O94986 1710 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 POGZQ7Z3K3 1410 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 NAP1L1P55209 391 aaKnown RBP8.81□□□□□ -1
COL6A4P1-202ENST00000487147 RRP12Q5JTH9 1297 aaKnown RBP8.81□□□□□ -1
COL6A4P1-202ENST00000487147 CEP112Q8N8E3 955 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 PI4K2BQ8TCG2 481 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 PLCD4Q9BRC7 762 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 FAM107BQ9H098 131 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 NCOA5Q9HCD5 579 aaKnown RBP8.81□□□□□ -1
COL6A4P1-202ENST00000487147 LZTFL1Q9NQ48 299 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 ZNHIT6Q9NWK9 470 aaKnown RBP8.81□□□□□ -1
COL6A4P1-202ENST00000487147 ATP10DQ9P241 1426 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 CTAGE15A4D2H0 777 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 CTAGE8P0CG41 777 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 TTC31Q49AM3 519 aaPredicted RBP8.81□□□□□ -1
COL6A4P1-202ENST00000487147 CTAGE6Q86UF2 777 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 CTAGE4Q8IX94 777 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 LINS1Q8NG48 757 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 MAP4K1Q92918 833 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 KIAA1468Q9P260 1216 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 A0A0D9SFI3 127 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 SHTN1A0MZ66 631 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 USP27XA6NNY8 438 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 CCDC129Q6ZRS4 1044 aa8.81□□□□□ -1
COL6A4P1-202ENST00000487147 CCDC47Q96A33 483 aaKnown RBP8.81□□□□□ -1
COL6A4P1-202ENST00000487147 RNF216Q9NWF9 866 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms