RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 PTMAP06454 111 aaKnown RBP14.62□□□□□ -0.07
PTCD2-204ENST00000486995 UBR2Q8IWV8 1755 aa14.61□□□□□ -0.07
PTCD2-204ENST00000486995 NUP188Q5SRE5 1749 aa14.61□□□□□ -0.07
PTCD2-204ENST00000486995 ADCY5O95622 1261 aa14.61□□□□□ -0.07
PTCD2-204ENST00000486995 TPM2P07951 284 aa14.61□□□□□ -0.07
PTCD2-204ENST00000486995 ATG3Q9NT62 314 aa14.61□□□□□ -0.07
PTCD2-204ENST00000486995 COL5A2P05997 1499 aaPredicted RBP14.61□□□□□ -0.07
PTCD2-204ENST00000486995 KDM4AO75164 1064 aa14.61□□□□□ -0.07
PTCD2-204ENST00000486995 IL2RBP14784 551 aa14.61□□□□□ -0.07
PTCD2-204ENST00000486995 LIG1P18858 919 aa14.61□□□□□ -0.07
PTCD2-204ENST00000486995 ZMYM1Q5SVZ6 1142 aa14.61□□□□□ -0.07
PTCD2-204ENST00000486995 SCAND2PQ9GZW5 306 aaPredicted RBP14.61□□□□□ -0.07
PTCD2-204ENST00000486995 TFIP11Q9UBB9 837 aaKnown RBP14.61□□□□□ -0.07
PTCD2-204ENST00000486995 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.61□□□□□ -0.07
PTCD2-204ENST00000486995 TJP1Q07157 1748 aa14.6□□□□□ -0.07
PTCD2-204ENST00000486995 CIAO1O76071 339 aa14.6□□□□□ -0.07
PTCD2-204ENST00000486995 TICAM2Q86XR7 235 aa14.6□□□□□ -0.07
PTCD2-204ENST00000486995 BRF1Q92994 677 aa14.6□□□□□ -0.07
PTCD2-204ENST00000486995 DSCC1Q9BVC3 393 aa14.6□□□□□ -0.07
PTCD2-204ENST00000486995 LRRC2Q9BYS8 371 aa14.6□□□□□ -0.07
PTCD2-204ENST00000486995 PUS3Q9BZE2 481 aaKnown RBP14.6□□□□□ -0.07
PTCD2-204ENST00000486995 A0A1B0GUL7 405 aa14.6□□□□□ -0.07
PTCD2-204ENST00000486995 HSPA2P54652 639 aa14.6□□□□□ -0.07
PTCD2-204ENST00000486995 SCRN1Q12765 414 aa14.6□□□□□ -0.07
PTCD2-204ENST00000486995 CARD10Q9BWT7 1032 aa14.6□□□□□ -0.07
PTCD2-204ENST00000486995 TNS2Q63HR2 1409 aa14.59□□□□□ -0.07
PTCD2-204ENST00000486995 SOS2Q07890 1332 aaPredicted RBP14.59□□□□□ -0.07
PTCD2-204ENST00000486995 HMGB1P09429 215 aaKnown RBP14.59□□□□□ -0.07
PTCD2-204ENST00000486995 HSP90B1P14625 803 aaKnown RBP14.59□□□□□ -0.07
PTCD2-204ENST00000486995 TERF1P54274 439 aa14.59□□□□□ -0.07
PTCD2-204ENST00000486995 DHX32Q7L7V1 743 aaKnown RBP14.59□□□□□ -0.07
PTCD2-204ENST00000486995 LEO1Q8WVC0 666 aaPredicted RBP14.59□□□□□ -0.07
PTCD2-204ENST00000486995 SPATA32Q96LK8 384 aa14.59□□□□□ -0.07
PTCD2-204ENST00000486995 ISCA1Q9BUE6 129 aa14.59□□□□□ -0.07
PTCD2-204ENST00000486995 IFIT1P09914 478 aaKnown RBP14.59□□□□□ -0.07
PTCD2-204ENST00000486995 SMARCC2Q8TAQ2 1214 aa14.59□□□□□ -0.07
PTCD2-204ENST00000486995 PFKFB2O60825 505 aa14.58□□□□□ -0.08
PTCD2-204ENST00000486995 HSPD1P10809 573 aaKnown RBP14.58□□□□□ -0.08
PTCD2-204ENST00000486995 EXOSC10Q01780 885 aaKnown RBP14.58□□□□□ -0.08
PTCD2-204ENST00000486995 RESTQ13127 1097 aa14.58□□□□□ -0.08
PTCD2-204ENST00000486995 MPNDQ8N594 471 aa14.58□□□□□ -0.08
PTCD2-204ENST00000486995 PAPPAQ13219 1627 aa14.58□□□□□ -0.08
PTCD2-204ENST00000486995 A0A0G2JLW4 131 aa14.58□□□□□ -0.08
PTCD2-204ENST00000486995 AP5Z1O43299 807 aa14.58□□□□□ -0.08
PTCD2-204ENST00000486995 CCDC192P0DO97 292 aa14.58□□□□□ -0.08
PTCD2-204ENST00000486995 DDX11Q96FC9 970 aa14.58□□□□□ -0.08
PTCD2-204ENST00000486995 NUP62CLQ9H1M0 184 aa14.58□□□□□ -0.08
PTCD2-204ENST00000486995 R3HCC1Q9Y3T6 440 aaKnown RBP14.58□□□□□ -0.08
PTCD2-204ENST00000486995 RNF113AO15541 343 aaKnown RBP14.57□□□□□ -0.08
PTCD2-204ENST00000486995 KCNA4P22459 653 aa14.57□□□□□ -0.08
PTCD2-204ENST00000486995 TCIRG1Q13488 830 aa14.57□□□□□ -0.08
PTCD2-204ENST00000486995 CAMK4Q16566 473 aa14.57□□□□□ -0.08
PTCD2-204ENST00000486995 LLPHQ9BRT6 129 aaKnown RBP14.57□□□□□ -0.08
PTCD2-204ENST00000486995 AGXT2Q9BYV1 514 aa14.57□□□□□ -0.08
PTCD2-204ENST00000486995 MAST3O60307 1309 aa14.57□□□□□ -0.08
PTCD2-204ENST00000486995 MAP3K11Q16584 847 aa14.57□□□□□ -0.08
PTCD2-204ENST00000486995 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.57□□□□□ -0.08
PTCD2-204ENST00000486995 ZNF830Q96NB3 372 aaPredicted RBP14.57□□□□□ -0.08
PTCD2-204ENST00000486995 DACT1Q9NYF0 836 aa14.57□□□□□ -0.08
PTCD2-204ENST00000486995 XIRP1Q702N8 1843 aaKnown RBP14.56□□□□□ -0.08
PTCD2-204ENST00000486995 FGD1P98174 961 aa14.56□□□□□ -0.08
PTCD2-204ENST00000486995 PGBD1Q96JS3 809 aa14.56□□□□□ -0.08
PTCD2-204ENST00000486995 STRN4Q9NRL3 753 aa14.56□□□□□ -0.08
PTCD2-204ENST00000486995 CEP126Q9P2H0 1117 aa14.56□□□□□ -0.08
PTCD2-204ENST00000486995 E7EWF7 191 aa14.56□□□□□ -0.08
PTCD2-204ENST00000486995 CTDNEP1O95476 244 aa14.56□□□□□ -0.08
PTCD2-204ENST00000486995 NSUN7Q8NE18 718 aaKnown RBP14.56□□□□□ -0.08
PTCD2-204ENST00000486995 SLAIN2Q9P270 581 aa14.56□□□□□ -0.08
PTCD2-204ENST00000486995 GOLGA6L4A6NEF3 574 aa14.55□□□□□ -0.08
PTCD2-204ENST00000486995 H3BQV1 296 aa14.55□□□□□ -0.08
PTCD2-204ENST00000486995 M0R2C6 588 aa14.55□□□□□ -0.08
PTCD2-204ENST00000486995 APOBRQ0VD83 1088 aa14.55□□□□□ -0.08
PTCD2-204ENST00000486995 KIAA2012Q0VF49 1180 aa14.55□□□□□ -0.08
PTCD2-204ENST00000486995 TRIM28Q13263 835 aaKnown RBP14.55□□□□□ -0.08
PTCD2-204ENST00000486995 CCDC57Q2TAC2 916 aa14.55□□□□□ -0.08
PTCD2-204ENST00000486995 IFFO2Q5TF58 517 aa14.55□□□□□ -0.08
PTCD2-204ENST00000486995 ZSCAN16Q9H4T2 348 aaPredicted RBP14.55□□□□□ -0.08
PTCD2-204ENST00000486995 MRVI1Q9Y6F6 885 aa14.55□□□□□ -0.08
PTCD2-204ENST00000486995 TYRO3Q06418 890 aa14.55□□□□□ -0.08
PTCD2-204ENST00000486995 OSBP2Q969R2 916 aa14.55□□□□□ -0.08
PTCD2-204ENST00000486995 SHANK3Q9BYB0 1731 aa14.54□□□□□ -0.08
PTCD2-204ENST00000486995 ADORA1P30542 326 aa14.54□□□□□ -0.08
PTCD2-204ENST00000486995 FKBP4Q02790 459 aaKnown RBP eCLIP14.54□□□□□ -0.08
PTCD2-204ENST00000486995 RBM43Q6ZSC3 357 aaKnown RBP14.54□□□□□ -0.08
PTCD2-204ENST00000486995 TNMDQ9H2S6 317 aa14.54□□□□□ -0.08
PTCD2-204ENST00000486995 TTC12Q9H892 705 aaPredicted RBP14.54□□□□□ -0.08
PTCD2-204ENST00000486995 DDX19AQ9NUU7 478 aaKnown RBP14.54□□□□□ -0.08
PTCD2-204ENST00000486995 ADD1P35611 737 aaKnown RBP14.54□□□□□ -0.08
PTCD2-204ENST00000486995 PLCB2Q00722 1185 aa14.54□□□□□ -0.08
PTCD2-204ENST00000486995 TTLL5Q6EMB2 1281 aa14.54□□□□□ -0.08
PTCD2-204ENST00000486995 CKAP2LQ8IYA6 745 aa14.54□□□□□ -0.08
PTCD2-204ENST00000486995 FAM200AQ8TCP9 573 aa14.54□□□□□ -0.08
PTCD2-204ENST00000486995 FAM89AQ96GI7 184 aa14.54□□□□□ -0.08
PTCD2-204ENST00000486995 XAGE2Q96GT9 111 aa14.54□□□□□ -0.08
PTCD2-204ENST00000486995 TMOD3Q9NYL9 352 aa14.54□□□□□ -0.08
PTCD2-204ENST00000486995 FBXO3Q9UK99 471 aa14.54□□□□□ -0.08
PTCD2-204ENST00000486995 ZNF330Q9Y3S2 320 aaPredicted RBP14.54□□□□□ -0.08
PTCD2-204ENST00000486995 NR1I2O75469 434 aa14.53□□□□□ -0.08
PTCD2-204ENST00000486995 EVA1CP58658 441 aa14.53□□□□□ -0.08
PTCD2-204ENST00000486995 PLA2G12BQ9BX93 195 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms