RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 PRPF40BQ6NWY9 871 aaKnown RBP11.85□□□□□ -0.51
MCF2L-227ENST00000486806 RHPN1Q8TCX5 695 aa11.85□□□□□ -0.51
MCF2L-227ENST00000486806 CNKSR1Q969H4 720 aa11.85□□□□□ -0.51
MCF2L-227ENST00000486806 KIF1BPQ96EK5 621 aa11.85□□□□□ -0.51
MCF2L-227ENST00000486806 CNNM1Q9NRU3 951 aa11.85□□□□□ -0.51
MCF2L-227ENST00000486806 LTBP1Q14766 1721 aa11.85□□□□□ -0.51
MCF2L-227ENST00000486806 MROH5Q6ZUA9 1318 aa11.85□□□□□ -0.51
MCF2L-227ENST00000486806 A0A1B0GUL6 1792 aa11.84□□□□□ -0.51
MCF2L-227ENST00000486806 SRCAPQ6ZRS2 3230 aa11.84□□□□□ -0.51
MCF2L-227ENST00000486806 A0A0G2JLW4 131 aa11.84□□□□□ -0.51
MCF2L-227ENST00000486806 NUCB1Q02818 461 aa11.84□□□□□ -0.51
MCF2L-227ENST00000486806 CHRNDQ07001 517 aa11.84□□□□□ -0.51
MCF2L-227ENST00000486806 NLGN2Q8NFZ4 835 aa11.84□□□□□ -0.51
MCF2L-227ENST00000486806 C7orf43Q8WVR3 580 aa11.84□□□□□ -0.51
MCF2L-227ENST00000486806 ZNF622Q969S3 477 aaKnown RBP eCLIP11.84□□□□□ -0.51
MCF2L-227ENST00000486806 LRRCC1Q9C099 1032 aa11.84□□□□□ -0.51
MCF2L-227ENST00000486806 FHDC1Q9C0D6 1143 aaPredicted RBP11.84□□□□□ -0.51
MCF2L-227ENST00000486806 MINPP1Q9UNW1 487 aa11.84□□□□□ -0.51
MCF2L-227ENST00000486806 ATP6V0A2Q9Y487 856 aa11.84□□□□□ -0.51
MCF2L-227ENST00000486806 BRCA1P38398 1863 aaKnown RBP11.84□□□□□ -0.51
MCF2L-227ENST00000486806 DUOX1Q9NRD9 1551 aa11.84□□□□□ -0.51
MCF2L-227ENST00000486806 SPEF2Q9C093 1822 aa11.83□□□□□ -0.51
MCF2L-227ENST00000486806 TAF1P21675 1872 aa11.83□□□□□ -0.52
MCF2L-227ENST00000486806 TFCP2Q12800 502 aa11.83□□□□□ -0.52
MCF2L-227ENST00000486806 OS9Q13438 667 aaPredicted RBP11.83□□□□□ -0.52
MCF2L-227ENST00000486806 METTL24Q5JXM2 366 aa11.83□□□□□ -0.52
MCF2L-227ENST00000486806 TTLL6Q8N841 843 aa11.83□□□□□ -0.52
MCF2L-227ENST00000486806 GPR108Q9NPR9 543 aa11.83□□□□□ -0.52
MCF2L-227ENST00000486806 PPP1R1BQ9UD71 204 aaPredicted RBP11.83□□□□□ -0.52
MCF2L-227ENST00000486806 APBB1O00213 710 aa11.82□□□□□ -0.52
MCF2L-227ENST00000486806 SMARCA5O60264 1052 aaPredicted RBP11.82□□□□□ -0.52
MCF2L-227ENST00000486806 PDE8BO95263 885 aa11.82□□□□□ -0.52
MCF2L-227ENST00000486806 FGFR2P21802 821 aa11.82□□□□□ -0.52
MCF2L-227ENST00000486806 CHD1LQ86WJ1 897 aa11.82□□□□□ -0.52
MCF2L-227ENST00000486806 SP8Q8IXZ3 490 aa11.82□□□□□ -0.52
MCF2L-227ENST00000486806 KLHL34Q8N239 644 aa11.82□□□□□ -0.52
MCF2L-227ENST00000486806 PODXL2Q9NZ53 605 aa11.82□□□□□ -0.52
MCF2L-227ENST00000486806 PIM2Q9P1W9 311 aa11.82□□□□□ -0.52
MCF2L-227ENST00000486806 SALL3Q9BXA9 1300 aa11.82□□□□□ -0.52
MCF2L-227ENST00000486806 SLX4Q8IY92 1834 aa11.81□□□□□ -0.52
MCF2L-227ENST00000486806 PUM3Q15397 648 aaKnown RBP11.81□□□□□ -0.52
MCF2L-227ENST00000486806 TNNI3KQ59H18 835 aa11.81□□□□□ -0.52
MCF2L-227ENST00000486806 ANKRD45Q5TZF3 282 aa11.81□□□□□ -0.52
MCF2L-227ENST00000486806 SYT17Q9BSW7 474 aa11.81□□□□□ -0.52
MCF2L-227ENST00000486806 ANKRD2Q9GZV1 360 aa11.81□□□□□ -0.52
MCF2L-227ENST00000486806 IL1RAPL2Q9NP60 686 aa11.81□□□□□ -0.52
MCF2L-227ENST00000486806 CEP126Q9P2H0 1117 aa11.81□□□□□ -0.52
MCF2L-227ENST00000486806 FPGT-TNNI3KV9GXZ4 949 aa11.81□□□□□ -0.52
MCF2L-227ENST00000486806 XDHP47989 1333 aa11.81□□□□□ -0.52
MCF2L-227ENST00000486806 IRS2Q9Y4H2 1338 aa11.81□□□□□ -0.52
MCF2L-227ENST00000486806 ARAP2Q8WZ64 1704 aa11.8□□□□□ -0.52
MCF2L-227ENST00000486806 GOLGB1Q14789 3259 aaKnown RBP11.8□□□□□ -0.52
MCF2L-227ENST00000486806 TAF5LO75529 589 aa11.8□□□□□ -0.52
MCF2L-227ENST00000486806 GPSM2P81274 684 aa11.8□□□□□ -0.52
MCF2L-227ENST00000486806 DALRD3Q5D0E6 543 aaKnown RBP11.8□□□□□ -0.52
MCF2L-227ENST00000486806 OLFM4Q6UX06 510 aa11.8□□□□□ -0.52
MCF2L-227ENST00000486806 CLASRPQ8N2M8 674 aaKnown RBP11.8□□□□□ -0.52
MCF2L-227ENST00000486806 HELBQ8NG08 1087 aaPredicted RBP11.8□□□□□ -0.52
MCF2L-227ENST00000486806 EAF2Q96CJ1 260 aaPredicted RBP11.8□□□□□ -0.52
MCF2L-227ENST00000486806 LNPKQ9C0E8 428 aa11.8□□□□□ -0.52
MCF2L-227ENST00000486806 A0A1B0GUL7 405 aa11.79□□□□□ -0.52
MCF2L-227ENST00000486806 SNAP23O00161 211 aa11.79□□□□□ -0.52
MCF2L-227ENST00000486806 PDE4AP27815 886 aa11.79□□□□□ -0.52
MCF2L-227ENST00000486806 UBE4AQ14139 1066 aa11.79□□□□□ -0.52
MCF2L-227ENST00000486806 ATP2B3Q16720 1220 aa11.79□□□□□ -0.52
MCF2L-227ENST00000486806 CC2D2BQ6DHV5 1058 aa11.79□□□□□ -0.52
MCF2L-227ENST00000486806 LPIN2Q92539 896 aa11.79□□□□□ -0.52
MCF2L-227ENST00000486806 TLR7Q9NYK1 1049 aaKnown RBP11.79□□□□□ -0.52
MCF2L-227ENST00000486806 DBNLQ9UJU6 430 aaKnown RBP11.79□□□□□ -0.52
MCF2L-227ENST00000486806 AKAP2Q9Y2D5 859 aa11.79□□□□□ -0.52
MCF2L-227ENST00000486806 CACNA1SQ13698 1873 aa11.78□□□□□ -0.52
MCF2L-227ENST00000486806 WTIPA6NIX2 430 aaPredicted RBP11.78□□□□□ -0.52
MCF2L-227ENST00000486806 C21orf2O43822 256 aa11.78□□□□□ -0.52
MCF2L-227ENST00000486806 CCDC93Q567U6 631 aa11.78□□□□□ -0.52
MCF2L-227ENST00000486806 SOGA3Q5TF21 947 aa11.78□□□□□ -0.52
MCF2L-227ENST00000486806 AACSQ86V21 672 aa11.78□□□□□ -0.52
MCF2L-227ENST00000486806 OTUD7AQ8TE49 926 aaPredicted RBP11.78□□□□□ -0.52
MCF2L-227ENST00000486806 RTFDC1Q9BY42 306 aaPredicted RBP11.78□□□□□ -0.52
MCF2L-227ENST00000486806 ANKIB1Q9P2G1 1089 aa11.78□□□□□ -0.52
MCF2L-227ENST00000486806 LEMD3Q9Y2U8 911 aa11.78□□□□□ -0.52
MCF2L-227ENST00000486806 ZNF804BA4D1E1 1349 aa11.78□□□□□ -0.52
MCF2L-227ENST00000486806 MED23Q9ULK4 1368 aa11.78□□□□□ -0.52
MCF2L-227ENST00000486806 UFL1O94874 794 aa11.77□□□□□ -0.53
MCF2L-227ENST00000486806 SLC5A1P13866 664 aa11.77□□□□□ -0.53
MCF2L-227ENST00000486806 ATP2B4P23634 1241 aa11.77□□□□□ -0.53
MCF2L-227ENST00000486806 KLRK1P26718 216 aa11.77□□□□□ -0.53
MCF2L-227ENST00000486806 ADORA1P30542 326 aa11.77□□□□□ -0.53
MCF2L-227ENST00000486806 GRIPAP1Q4V328 841 aa11.77□□□□□ -0.53
MCF2L-227ENST00000486806 C15orf52Q6ZUT6 534 aaKnown RBP11.77□□□□□ -0.53
MCF2L-227ENST00000486806 SKAP1Q86WV1 359 aa11.77□□□□□ -0.53
MCF2L-227ENST00000486806 C16orf71Q8IYS4 520 aaPredicted RBP11.77□□□□□ -0.53
MCF2L-227ENST00000486806 TBC1D16Q8TBP0 767 aa11.77□□□□□ -0.53
MCF2L-227ENST00000486806 DBNDD2Q9BQY9 259 aa11.77□□□□□ -0.53
MCF2L-227ENST00000486806 POLLQ9UGP5 575 aa11.77□□□□□ -0.53
MCF2L-227ENST00000486806 GGA1Q9UJY5 639 aa11.77□□□□□ -0.53
MCF2L-227ENST00000486806 NSFL1CQ9UNZ2 370 aaKnown RBP11.77□□□□□ -0.53
MCF2L-227ENST00000486806 IFIT2P09913 472 aaKnown RBP11.76□□□□□ -0.53
MCF2L-227ENST00000486806 IFIT1P09914 478 aaKnown RBP11.76□□□□□ -0.53
MCF2L-227ENST00000486806 MX1P20591 662 aa11.76□□□□□ -0.53
MCF2L-227ENST00000486806 TIMM10P62072 90 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms