RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 RPS8P62241 208 aaKnown RBP18.64■□□□□ 0.57
SDCCAG3-211ENST00000486441 KIF23Q02241 960 aaPredicted RBP18.64■□□□□ 0.57
SDCCAG3-211ENST00000486441 DGKZQ13574 1117 aa18.64■□□□□ 0.57
SDCCAG3-211ENST00000486441 RBM26Q5T8P6 1007 aaKnown RBP18.64■□□□□ 0.57
SDCCAG3-211ENST00000486441 HDGFL1Q5TGJ6 251 aa18.64■□□□□ 0.57
SDCCAG3-211ENST00000486441 GBA2Q9HCG7 927 aaPredicted RBP18.64■□□□□ 0.57
SDCCAG3-211ENST00000486441 SEC31BQ9NQW1 1179 aa18.64■□□□□ 0.57
SDCCAG3-211ENST00000486441 PODXL2Q9NZ53 605 aa18.64■□□□□ 0.57
SDCCAG3-211ENST00000486441 DBF4Q9UBU7 674 aaPredicted RBP18.64■□□□□ 0.57
SDCCAG3-211ENST00000486441 IRS4O14654 1257 aaPredicted RBP18.63■□□□□ 0.57
SDCCAG3-211ENST00000486441 ZNF853P0CG23 659 aa18.62■□□□□ 0.57
SDCCAG3-211ENST00000486441 LAS1LQ9Y4W2 734 aaKnown RBP18.62■□□□□ 0.57
SDCCAG3-211ENST00000486441 DUSP27Q5VZP5 1158 aa18.61■□□□□ 0.57
SDCCAG3-211ENST00000486441 CSRNP1Q96S65 589 aa18.61■□□□□ 0.57
SDCCAG3-211ENST00000486441 GMLQ99445 158 aa18.61■□□□□ 0.57
SDCCAG3-211ENST00000486441 RNF186Q9NXI6 227 aa18.61■□□□□ 0.57
SDCCAG3-211ENST00000486441 WTIPA6NIX2 430 aaPredicted RBP18.6■□□□□ 0.57
SDCCAG3-211ENST00000486441 ZNF280AP59817 542 aaPredicted RBP18.6■□□□□ 0.57
SDCCAG3-211ENST00000486441 C2orf69Q8N8R5 385 aa18.6■□□□□ 0.57
SDCCAG3-211ENST00000486441 RUNDC1Q96C34 613 aa18.6■□□□□ 0.57
SDCCAG3-211ENST00000486441 CFAP44Q96MT7 982 aa18.6■□□□□ 0.57
SDCCAG3-211ENST00000486441 PHAXQ9H814 394 aaKnown RBP18.6■□□□□ 0.57
SDCCAG3-211ENST00000486441 HYPKQ9NX55 129 aa18.6■□□□□ 0.57
SDCCAG3-211ENST00000486441 ADAMTS8Q9UP79 889 aa18.6■□□□□ 0.57
SDCCAG3-211ENST00000486441 SLC10A3P09131 477 aa18.59■□□□□ 0.57
SDCCAG3-211ENST00000486441 KIF4BQ2VIQ3 1234 aa18.59■□□□□ 0.57
SDCCAG3-211ENST00000486441 ZBTB38Q8NAP3 1195 aaPredicted RBP18.59■□□□□ 0.57
SDCCAG3-211ENST00000486441 CCDC102AQ96A19 550 aa18.59■□□□□ 0.57
SDCCAG3-211ENST00000486441 DCPSQ96C86 337 aaKnown RBP18.59■□□□□ 0.57
SDCCAG3-211ENST00000486441 EYA3Q99504 573 aa18.59■□□□□ 0.57
SDCCAG3-211ENST00000486441 MBIPQ9NS73 344 aa18.59■□□□□ 0.57
SDCCAG3-211ENST00000486441 SAGE1Q9NXZ1 904 aa18.59■□□□□ 0.57
SDCCAG3-211ENST00000486441 TRPA1O75762 1119 aa18.58■□□□□ 0.56
SDCCAG3-211ENST00000486441 ZNF157P51786 506 aaPredicted RBP18.58■□□□□ 0.56
SDCCAG3-211ENST00000486441 JARID2Q92833 1246 aaPredicted RBP18.58■□□□□ 0.56
SDCCAG3-211ENST00000486441 CDCA5Q96FF9 252 aa18.58■□□□□ 0.56
SDCCAG3-211ENST00000486441 ZC3H12CQ9C0D7 883 aaKnown RBP18.58■□□□□ 0.56
SDCCAG3-211ENST00000486441 GGA3Q9NZ52 723 aa18.58■□□□□ 0.56
SDCCAG3-211ENST00000486441 ZNF609O15014 1411 aa18.57■□□□□ 0.56
SDCCAG3-211ENST00000486441 SCARF1Q14162 830 aa18.57■□□□□ 0.56
SDCCAG3-211ENST00000486441 RSBN1LQ6PCB5 846 aaPredicted RBP18.56■□□□□ 0.56
SDCCAG3-211ENST00000486441 MYBBP1AQ9BQG0 1328 aaKnown RBP18.55■□□□□ 0.56
SDCCAG3-211ENST00000486441 UFL1O94874 794 aa18.55■□□□□ 0.56
SDCCAG3-211ENST00000486441 PCCAP05165 728 aaPredicted RBP18.55■□□□□ 0.56
SDCCAG3-211ENST00000486441 AGBL3Q8NEM8 1001 aa18.55■□□□□ 0.56
SDCCAG3-211ENST00000486441 ANGEL2Q5VTE6 544 aaKnown RBP18.54■□□□□ 0.56
SDCCAG3-211ENST00000486441 MOB2Q70IA6 237 aa18.54■□□□□ 0.56
SDCCAG3-211ENST00000486441 RIC3Q7Z5B4 369 aa18.54■□□□□ 0.56
SDCCAG3-211ENST00000486441 RASAL3Q86YV0 1011 aa18.54■□□□□ 0.56
SDCCAG3-211ENST00000486441 SULF1Q8IWU6 871 aa18.54■□□□□ 0.56
SDCCAG3-211ENST00000486441 MYD88Q99836 296 aa18.54■□□□□ 0.56
SDCCAG3-211ENST00000486441 GGA1Q9UJY5 639 aa18.54■□□□□ 0.56
SDCCAG3-211ENST00000486441 SCAF8Q9UPN6 1271 aaKnown RBP18.54■□□□□ 0.56
SDCCAG3-211ENST00000486441 C8orf58Q8NAV2 365 aa18.53■□□□□ 0.56
SDCCAG3-211ENST00000486441 CCDC191Q8NCU4 936 aa18.53■□□□□ 0.56
SDCCAG3-211ENST00000486441 CCDC85AQ96PX6 553 aaPredicted RBP18.53■□□□□ 0.56
SDCCAG3-211ENST00000486441 ANKIB1Q9P2G1 1089 aa18.53■□□□□ 0.56
SDCCAG3-211ENST00000486441 ELL2O00472 640 aaPredicted RBP18.52■□□□□ 0.56
SDCCAG3-211ENST00000486441 PDE8AO60658 829 aa18.52■□□□□ 0.56
SDCCAG3-211ENST00000486441 DDX10Q13206 875 aaKnown RBP18.52■□□□□ 0.56
SDCCAG3-211ENST00000486441 METTL22Q9BUU2 404 aaPredicted RBP18.51■□□□□ 0.55
SDCCAG3-211ENST00000486441 MYOZ2Q9NPC6 264 aa18.51■□□□□ 0.55
SDCCAG3-211ENST00000486441 USP17L8P0C7I0 530 aa18.5■□□□□ 0.55
SDCCAG3-211ENST00000486441 SOX10P56693 466 aa18.5■□□□□ 0.55
SDCCAG3-211ENST00000486441 GOLGA2Q08379 1002 aa18.5■□□□□ 0.55
SDCCAG3-211ENST00000486441 NBPF9Q3BBW0 867 aa18.5■□□□□ 0.55
SDCCAG3-211ENST00000486441 CCDC152Q4G0S7 254 aa18.5■□□□□ 0.55
SDCCAG3-211ENST00000486441 PRAMEF18Q5VWM3 479 aa18.5■□□□□ 0.55
SDCCAG3-211ENST00000486441 PODNQ7Z5L7 613 aa18.5■□□□□ 0.55
SDCCAG3-211ENST00000486441 MXD3Q9BW11 206 aa18.5■□□□□ 0.55
SDCCAG3-211ENST00000486441 IFT57Q9NWB7 429 aa18.5■□□□□ 0.55
SDCCAG3-211ENST00000486441 PSME4Q14997 1843 aa18.5■□□□□ 0.55
SDCCAG3-211ENST00000486441 AKAP11Q9UKA4 1901 aa18.5■□□□□ 0.55
SDCCAG3-211ENST00000486441 XDHP47989 1333 aa18.49■□□□□ 0.55
SDCCAG3-211ENST00000486441 PITPNM2Q9BZ72 1349 aa18.49■□□□□ 0.55
SDCCAG3-211ENST00000486441 IGKV5-2P06315 115 aa18.49■□□□□ 0.55
SDCCAG3-211ENST00000486441 FKBP1BP68106 108 aa18.49■□□□□ 0.55
SDCCAG3-211ENST00000486441 CWC25Q9NXE8 425 aaPredicted RBP18.49■□□□□ 0.55
SDCCAG3-211ENST00000486441 HTTP42858 3142 aa18.48■□□□□ 0.55
SDCCAG3-211ENST00000486441 USP17L3A6NCW0 530 aa18.48■□□□□ 0.55
SDCCAG3-211ENST00000486441 USP17L4A6NCW7 530 aa18.48■□□□□ 0.55
SDCCAG3-211ENST00000486441 UBE2Q2LH0YL09 131 aa18.48■□□□□ 0.55
SDCCAG3-211ENST00000486441 APAF1O14727 1248 aa18.48■□□□□ 0.55
SDCCAG3-211ENST00000486441 ATP2B4P23634 1241 aa18.48■□□□□ 0.55
SDCCAG3-211ENST00000486441 WDR43Q15061 677 aaKnown RBP eCLIP18.48■□□□□ 0.55
SDCCAG3-211ENST00000486441 DACT2Q5SW24 774 aa18.48■□□□□ 0.55
SDCCAG3-211ENST00000486441 USP17L1Q7RTZ2 530 aa18.48■□□□□ 0.55
SDCCAG3-211ENST00000486441 CTU1Q7Z7A3 348 aaKnown RBP18.48■□□□□ 0.55
SDCCAG3-211ENST00000486441 TXNRD3Q86VQ6 643 aa18.48■□□□□ 0.55
SDCCAG3-211ENST00000486441 TSPYL6Q8N831 410 aa18.48■□□□□ 0.55
SDCCAG3-211ENST00000486441 TTLL11Q8NHH1 800 aa18.48■□□□□ 0.55
SDCCAG3-211ENST00000486441 MINPP1Q9UNW1 487 aa18.48■□□□□ 0.55
SDCCAG3-211ENST00000486441 ANKRD18AQ8IVF6 992 aa18.47■□□□□ 0.55
SDCCAG3-211ENST00000486441 REM2Q8IYK8 340 aaPredicted RBP18.47■□□□□ 0.55
SDCCAG3-211ENST00000486441 MKI67P46013 3256 aaKnown RBP18.47■□□□□ 0.55
SDCCAG3-211ENST00000486441 ZNF646O15015 1829 aaPredicted RBP18.46■□□□□ 0.55
SDCCAG3-211ENST00000486441 HSP90B1P14625 803 aaKnown RBP18.46■□□□□ 0.55
SDCCAG3-211ENST00000486441 GREM2Q9H772 168 aa18.46■□□□□ 0.55
SDCCAG3-211ENST00000486441 BSDC1Q9NW68 430 aaPredicted RBP18.46■□□□□ 0.55
SDCCAG3-211ENST00000486441 PAPPA2Q9BXP8 1791 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms