RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 C3orf67Q6ZVT6 689 aa17.88■□□□□ 0.45
POLR2J3-204ENST00000486319 CLASRPQ8N2M8 674 aaKnown RBP17.88■□□□□ 0.45
POLR2J3-204ENST00000486319 FAM89AQ96GI7 184 aa17.88■□□□□ 0.45
POLR2J3-204ENST00000486319 TBC1D32Q96NH3 1257 aa17.88■□□□□ 0.45
POLR2J3-204ENST00000486319 ARFGEF1Q9Y6D6 1849 aa17.87■□□□□ 0.45
POLR2J3-204ENST00000486319 DLEC1Q9Y238 1755 aa17.87■□□□□ 0.45
POLR2J3-204ENST00000486319 SDSP20132 328 aa17.87■□□□□ 0.45
POLR2J3-204ENST00000486319 RTL5Q5HYW3 569 aaPredicted RBP17.87■□□□□ 0.45
POLR2J3-204ENST00000486319 TBC1D9Q6ZT07 1266 aa17.87■□□□□ 0.45
POLR2J3-204ENST00000486319 C7orf43Q8WVR3 580 aa17.87■□□□□ 0.45
POLR2J3-204ENST00000486319 COPRSQ9NQ92 184 aa17.87■□□□□ 0.45
POLR2J3-204ENST00000486319 RNF181Q9P0P0 153 aa17.87■□□□□ 0.45
POLR2J3-204ENST00000486319 PA2G4Q9UQ80 394 aaKnown RBP17.87■□□□□ 0.45
POLR2J3-204ENST00000486319 COL11A2P13942 1736 aaPredicted RBP17.87■□□□□ 0.45
POLR2J3-204ENST00000486319 MYH3P11055 1940 aa17.86■□□□□ 0.45
POLR2J3-204ENST00000486319 NFKBIEO00221 500 aa17.86■□□□□ 0.45
POLR2J3-204ENST00000486319 MFAP1P55081 439 aaKnown RBP17.86■□□□□ 0.45
POLR2J3-204ENST00000486319 CASC1Q6TDU7 716 aa17.86■□□□□ 0.45
POLR2J3-204ENST00000486319 JARID2Q92833 1246 aaPredicted RBP17.86■□□□□ 0.45
POLR2J3-204ENST00000486319 PCCAP05165 728 aaPredicted RBP17.85■□□□□ 0.45
POLR2J3-204ENST00000486319 LMNB1P20700 586 aa17.85■□□□□ 0.45
POLR2J3-204ENST00000486319 FOXO4P98177 505 aa17.85■□□□□ 0.45
POLR2J3-204ENST00000486319 ZBTB38Q8NAP3 1195 aaPredicted RBP17.85■□□□□ 0.45
POLR2J3-204ENST00000486319 ZNF526Q8TF50 670 aaPredicted RBP17.85■□□□□ 0.45
POLR2J3-204ENST00000486319 CRAMP1Q96RY5 1269 aa17.85■□□□□ 0.45
POLR2J3-204ENST00000486319 RFX5P48382 616 aaPredicted RBP17.84■□□□□ 0.45
POLR2J3-204ENST00000486319 CCDC93Q567U6 631 aa17.84■□□□□ 0.45
POLR2J3-204ENST00000486319 C22orf23Q9BZE7 217 aa17.84■□□□□ 0.45
POLR2J3-204ENST00000486319 TTC41PQ6P2S7 1318 aa17.84■□□□□ 0.45
POLR2J3-204ENST00000486319 LMBR1LQ6UX01 489 aa17.83■□□□□ 0.45
POLR2J3-204ENST00000486319 TAOK3Q9H2K8 898 aa17.83■□□□□ 0.45
POLR2J3-204ENST00000486319 GPBP1L1Q9HC44 474 aaPredicted RBP17.83■□□□□ 0.45
POLR2J3-204ENST00000486319 TNRC6CQ9HCJ0 1690 aaKnown RBP17.83■□□□□ 0.44
POLR2J3-204ENST00000486319 IRS4O14654 1257 aaPredicted RBP17.82■□□□□ 0.44
POLR2J3-204ENST00000486319 HSP90B1P14625 803 aaKnown RBP17.82■□□□□ 0.44
POLR2J3-204ENST00000486319 PTPN12Q05209 780 aaKnown RBP17.82■□□□□ 0.44
POLR2J3-204ENST00000486319 OLFM4Q6UX06 510 aa17.82■□□□□ 0.44
POLR2J3-204ENST00000486319 RTKN2Q8IZC4 609 aa17.82■□□□□ 0.44
POLR2J3-204ENST00000486319 GPATCH3Q96I76 525 aa17.82■□□□□ 0.44
POLR2J3-204ENST00000486319 SLX4Q8IY92 1834 aa17.82■□□□□ 0.44
POLR2J3-204ENST00000486319 CDHR2Q9BYE9 1310 aa17.82■□□□□ 0.44
POLR2J3-204ENST00000486319 SASH1O94885 1247 aa17.82■□□□□ 0.44
POLR2J3-204ENST00000486319 IFIT2P09913 472 aaKnown RBP17.82■□□□□ 0.44
POLR2J3-204ENST00000486319 PRELPP51888 382 aa17.82■□□□□ 0.44
POLR2J3-204ENST00000486319 DDX46Q7L014 1031 aaKnown RBP17.82■□□□□ 0.44
POLR2J3-204ENST00000486319 PLA2G12BQ9BX93 195 aa17.82■□□□□ 0.44
POLR2J3-204ENST00000486319 LTBP3Q9NS15 1303 aa17.81■□□□□ 0.44
POLR2J3-204ENST00000486319 PPEF1O14829 653 aaPredicted RBP17.81■□□□□ 0.44
POLR2J3-204ENST00000486319 CC2D2BQ6DHV5 1058 aa17.81■□□□□ 0.44
POLR2J3-204ENST00000486319 SIL1Q9H173 461 aa17.81■□□□□ 0.44
POLR2J3-204ENST00000486319 TMX4Q9H1E5 349 aaPredicted RBP17.81■□□□□ 0.44
POLR2J3-204ENST00000486319 ERC2O15083 957 aa17.8■□□□□ 0.44
POLR2J3-204ENST00000486319 BBOX1O75936 387 aa17.8■□□□□ 0.44
POLR2J3-204ENST00000486319 SF3B3Q15393 1217 aaKnown RBP17.8■□□□□ 0.44
POLR2J3-204ENST00000486319 TSHZ3Q63HK5 1081 aa17.8■□□□□ 0.44
POLR2J3-204ENST00000486319 KLHDC4Q8TBB5 520 aa17.8■□□□□ 0.44
POLR2J3-204ENST00000486319 CHMP3Q9Y3E7 222 aa17.8■□□□□ 0.44
POLR2J3-204ENST00000486319 TRIM6-TRIM34B2RNG4 842 aa17.79■□□□□ 0.44
POLR2J3-204ENST00000486319 RBM25P49756 843 aaKnown RBP17.79■□□□□ 0.44
POLR2J3-204ENST00000486319 FKBP4Q02790 459 aaKnown RBP eCLIP17.79■□□□□ 0.44
POLR2J3-204ENST00000486319 AACSQ86V21 672 aa17.79■□□□□ 0.44
POLR2J3-204ENST00000486319 PI4K2BQ8TCG2 481 aa17.79■□□□□ 0.44
POLR2J3-204ENST00000486319 GLRX3O76003 335 aaKnown RBP17.78■□□□□ 0.44
POLR2J3-204ENST00000486319 GRIPAP1Q4V328 841 aa17.78■□□□□ 0.44
POLR2J3-204ENST00000486319 ERICH6Q7L0X2 663 aa17.78■□□□□ 0.44
POLR2J3-204ENST00000486319 ECHDC1Q9NTX5 307 aa17.78■□□□□ 0.44
POLR2J3-204ENST00000486319 DAXXQ9UER7 740 aaPredicted RBP17.78■□□□□ 0.44
POLR2J3-204ENST00000486319 ZC3H4Q9UPT8 1303 aaKnown RBP17.78■□□□□ 0.44
POLR2J3-204ENST00000486319 PDE8AO60658 829 aa17.77■□□□□ 0.44
POLR2J3-204ENST00000486319 GRAPQ13588 217 aa17.77■□□□□ 0.44
POLR2J3-204ENST00000486319 GRAPLQ8TC17 118 aaPredicted RBP17.77■□□□□ 0.44
POLR2J3-204ENST00000486319 RILPL2Q969X0 211 aa17.77■□□□□ 0.44
POLR2J3-204ENST00000486319 ATP6V0A2Q9Y487 856 aa17.77■□□□□ 0.44
POLR2J3-204ENST00000486319 CCDC57Q2TAC2 916 aa17.77■□□□□ 0.43
POLR2J3-204ENST00000486319 EAF2Q96CJ1 260 aaPredicted RBP17.77■□□□□ 0.43
POLR2J3-204ENST00000486319 ZNF277Q9NRM2 450 aaPredicted RBP17.77■□□□□ 0.43
POLR2J3-204ENST00000486319 FBXO3Q9UK99 471 aa17.77■□□□□ 0.43
POLR2J3-204ENST00000486319 LAMB2P55268 1798 aa17.76■□□□□ 0.43
POLR2J3-204ENST00000486319 CSF1RP07333 972 aa17.76■□□□□ 0.43
POLR2J3-204ENST00000486319 IL15P40933 162 aaPredicted RBP17.76■□□□□ 0.43
POLR2J3-204ENST00000486319 BECN1Q14457 450 aa17.76■□□□□ 0.43
POLR2J3-204ENST00000486319 CNTROBQ8N137 903 aa17.76■□□□□ 0.43
POLR2J3-204ENST00000486319 PSMD1Q99460 953 aa17.76■□□□□ 0.43
POLR2J3-204ENST00000486319 CIAO1O76071 339 aa17.75■□□□□ 0.43
POLR2J3-204ENST00000486319 REC8O95072 547 aa17.75■□□□□ 0.43
POLR2J3-204ENST00000486319 CCDC152Q4G0S7 254 aa17.75■□□□□ 0.43
POLR2J3-204ENST00000486319 SP8Q8IXZ3 490 aa17.75■□□□□ 0.43
POLR2J3-204ENST00000486319 CACNA1SQ13698 1873 aa17.74■□□□□ 0.43
POLR2J3-204ENST00000486319 DPY19L2Q6NUT2 758 aa17.74■□□□□ 0.43
POLR2J3-204ENST00000486319 TMC4Q7Z404 712 aa17.74■□□□□ 0.43
POLR2J3-204ENST00000486319 SLC51AQ86UW1 340 aa17.74■□□□□ 0.43
POLR2J3-204ENST00000486319 GPR108Q9NPR9 543 aa17.74■□□□□ 0.43
POLR2J3-204ENST00000486319 GLTPD2A6NH11 291 aa17.73■□□□□ 0.43
POLR2J3-204ENST00000486319 EYA2O00167 538 aa17.73■□□□□ 0.43
POLR2J3-204ENST00000486319 IARSP41252 1262 aaKnown RBP17.73■□□□□ 0.43
POLR2J3-204ENST00000486319 TFCP2Q12800 502 aa17.73■□□□□ 0.43
POLR2J3-204ENST00000486319 TNNI3KQ59H18 835 aa17.73■□□□□ 0.43
POLR2J3-204ENST00000486319 CELF1Q92879 486 aaKnown RBP17.73■□□□□ 0.43
POLR2J3-204ENST00000486319 CCDC85AQ96PX6 553 aaPredicted RBP17.73■□□□□ 0.43
POLR2J3-204ENST00000486319 CCDC8Q9H0W5 538 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms