RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 CCDC50Q8IVM0 306 aa9.99□□□□□ -0.81
GABRE-209ENST00000486255 CTAGE1Q96RT6 745 aa9.99□□□□□ -0.81
GABRE-209ENST00000486255 MYOM2P54296 1465 aa9.99□□□□□ -0.81
GABRE-209ENST00000486255 FAM114A2Q9NRY5 505 aa9.99□□□□□ -0.81
GABRE-209ENST00000486255 STX6O43752 255 aa9.99□□□□□ -0.81
GABRE-209ENST00000486255 CAVIN2O95810 425 aa9.99□□□□□ -0.81
GABRE-209ENST00000486255 NLRP5P59047 1200 aa9.99□□□□□ -0.81
GABRE-209ENST00000486255 MRPS9P82933 396 aaKnown RBP9.99□□□□□ -0.81
GABRE-209ENST00000486255 ANO6Q4KMQ2 910 aa9.99□□□□□ -0.81
GABRE-209ENST00000486255 RABGAP1Q9Y3P9 1069 aa9.99□□□□□ -0.81
GABRE-209ENST00000486255 SLC12A7Q9Y666 1083 aa9.99□□□□□ -0.81
GABRE-209ENST00000486255 KLHL40Q2TBA0 621 aa9.99□□□□□ -0.81
GABRE-209ENST00000486255 TCERG1LQ5VWI1 586 aa9.99□□□□□ -0.81
GABRE-209ENST00000486255 FBXO31Q5XUX0 539 aaPredicted RBP9.99□□□□□ -0.81
GABRE-209ENST00000486255 SEPT14Q6ZU15 432 aa9.99□□□□□ -0.81
GABRE-209ENST00000486255 HDXQ7Z353 690 aa9.99□□□□□ -0.81
GABRE-209ENST00000486255 ZSCAN29Q8IWY8 852 aaPredicted RBP9.99□□□□□ -0.81
GABRE-209ENST00000486255 CCDC172P0C7W6 258 aa9.99□□□□□ -0.81
GABRE-209ENST00000486255 MAP3K9P80192 1104 aa9.99□□□□□ -0.81
GABRE-209ENST00000486255 PLVAPQ9BX97 442 aa9.99□□□□□ -0.81
GABRE-209ENST00000486255 TUBB4BP68371 445 aa9.98□□□□□ -0.81
GABRE-209ENST00000486255 INTS8Q75QN2 995 aaKnown RBP9.98□□□□□ -0.81
GABRE-209ENST00000486255 B4GALNT4Q76KP1 1039 aa9.98□□□□□ -0.81
GABRE-209ENST00000486255 TMEM57Q8N5G2 664 aa9.98□□□□□ -0.81
GABRE-209ENST00000486255 ASXL1Q8IXJ9 1541 aa9.98□□□□□ -0.81
GABRE-209ENST00000486255 RIMS2Q9UQ26 1411 aa9.98□□□□□ -0.81
GABRE-209ENST00000486255 IDH1O75874 414 aaKnown RBP9.98□□□□□ -0.81
GABRE-209ENST00000486255 PDE1CQ14123 709 aaPredicted RBP9.98□□□□□ -0.81
GABRE-209ENST00000486255 DNAJC21Q5F1R6 531 aaKnown RBP9.98□□□□□ -0.81
GABRE-209ENST00000486255 GBP7Q8N8V2 638 aaPredicted RBP9.98□□□□□ -0.81
GABRE-209ENST00000486255 TTC16Q8NEE8 873 aa9.98□□□□□ -0.81
GABRE-209ENST00000486255 CTCFLQ8NI51 663 aaPredicted RBP9.98□□□□□ -0.81
GABRE-209ENST00000486255 PUF60Q9UHX1 559 aaKnown RBP9.98□□□□□ -0.81
GABRE-209ENST00000486255 SMIM23A6NLE4 172 aa9.98□□□□□ -0.81
GABRE-209ENST00000486255 GOLGA8AA7E2F4 631 aa9.98□□□□□ -0.81
GABRE-209ENST00000486255 GOLGA8BA8MQT2 603 aa9.98□□□□□ -0.81
GABRE-209ENST00000486255 GIMAP6Q6P9H5 292 aa9.98□□□□□ -0.81
GABRE-209ENST00000486255 LRRC45Q96CN5 670 aa9.98□□□□□ -0.81
GABRE-209ENST00000486255 SLC12A5Q9H2X9 1139 aa9.98□□□□□ -0.81
GABRE-209ENST00000486255 KCNK9Q9NPC2 374 aa9.98□□□□□ -0.81
GABRE-209ENST00000486255 ARL1P40616 181 aaPredicted RBP9.98□□□□□ -0.81
GABRE-209ENST00000486255 TERF1P54274 439 aa9.98□□□□□ -0.81
GABRE-209ENST00000486255 GSTA5Q7RTV2 222 aa9.98□□□□□ -0.81
GABRE-209ENST00000486255 POTEDQ86YR6 584 aa9.98□□□□□ -0.81
GABRE-209ENST00000486255 CCDC110Q8TBZ0 833 aa9.98□□□□□ -0.81
GABRE-209ENST00000486255 CUL5Q93034 780 aa9.98□□□□□ -0.81
GABRE-209ENST00000486255 IFT74Q96LB3 600 aa9.98□□□□□ -0.81
GABRE-209ENST00000486255 ZNF853P0CG23 659 aa9.97□□□□□ -0.81
GABRE-209ENST00000486255 PRPHP41219 470 aa9.97□□□□□ -0.81
GABRE-209ENST00000486255 TOM1L2Q6ZVM7 507 aa9.97□□□□□ -0.81
GABRE-209ENST00000486255 CAPZA3Q96KX2 299 aa9.97□□□□□ -0.81
GABRE-209ENST00000486255 TCHPQ9BT92 498 aa9.97□□□□□ -0.81
GABRE-209ENST00000486255 EHMT1Q9H9B1 1298 aa9.97□□□□□ -0.81
GABRE-209ENST00000486255 ZNF287Q9HBT7 754 aa9.97□□□□□ -0.81
GABRE-209ENST00000486255 RMND1Q9NWS8 449 aa9.97□□□□□ -0.81
GABRE-209ENST00000486255 TTC36A6NLP5 189 aa9.97□□□□□ -0.81
GABRE-209ENST00000486255 N4BP3O15049 544 aa9.97□□□□□ -0.81
GABRE-209ENST00000486255 IGSF3O75054 1194 aa9.97□□□□□ -0.81
GABRE-209ENST00000486255 AFAP1L1Q8TED9 768 aa9.97□□□□□ -0.81
GABRE-209ENST00000486255 TFIP11Q9UBB9 837 aaKnown RBP9.97□□□□□ -0.81
GABRE-209ENST00000486255 RFC1P35251 1148 aaPredicted RBP9.97□□□□□ -0.81
GABRE-209ENST00000486255 CABP4P57796 275 aa9.97□□□□□ -0.81
GABRE-209ENST00000486255 EXOC1Q9NV70 894 aa9.97□□□□□ -0.81
GABRE-209ENST00000486255 SPATA31E1Q6ZUB1 1445 aa9.97□□□□□ -0.81
GABRE-209ENST00000486255 KDM5CP41229 1560 aa9.97□□□□□ -0.81
GABRE-209ENST00000486255 HCLS1P14317 486 aaPredicted RBP9.97□□□□□ -0.81
GABRE-209ENST00000486255 CCT2P78371 535 aaKnown RBP9.97□□□□□ -0.81
GABRE-209ENST00000486255 CCDC144CPQ8IYA2 1237 aa9.97□□□□□ -0.81
GABRE-209ENST00000486255 TRIM47Q96LD4 638 aa9.97□□□□□ -0.81
GABRE-209ENST00000486255 VCX3BQ9H321 246 aa9.97□□□□□ -0.81
GABRE-209ENST00000486255 NDC80O14777 642 aa9.97□□□□□ -0.81
GABRE-209ENST00000486255 CCDC174Q6PII3 467 aa9.97□□□□□ -0.81
GABRE-209ENST00000486255 STXBP4Q6ZWJ1 553 aa9.97□□□□□ -0.81
GABRE-209ENST00000486255 CCDC186Q7Z3E2 898 aa9.97□□□□□ -0.81
GABRE-209ENST00000486255 RNF168Q8IYW5 571 aaPredicted RBP9.97□□□□□ -0.81
GABRE-209ENST00000486255 KIF1BPQ96EK5 621 aa9.97□□□□□ -0.81
GABRE-209ENST00000486255 MMRN2Q9H8L6 949 aa9.97□□□□□ -0.81
GABRE-209ENST00000486255 CEP126Q9P2H0 1117 aa9.97□□□□□ -0.81
GABRE-209ENST00000486255 TTLL12Q14166 644 aaPredicted RBP9.96□□□□□ -0.81
GABRE-209ENST00000486255 DDX54Q8TDD1 881 aaKnown RBP9.96□□□□□ -0.81
GABRE-209ENST00000486255 GTF3C6Q969F1 213 aa9.96□□□□□ -0.81
GABRE-209ENST00000486255 ZKSCAN5Q9Y2L8 839 aa9.96□□□□□ -0.81
GABRE-209ENST00000486255 CCDC194A0A1B0GVG4 234 aa9.96□□□□□ -0.81
GABRE-209ENST00000486255 TMEM110-MUSTN1A8MSY1 372 aa9.96□□□□□ -0.81
GABRE-209ENST00000486255 AKR1B10O60218 316 aa9.96□□□□□ -0.81
GABRE-209ENST00000486255 GLRX3O76003 335 aaKnown RBP9.96□□□□□ -0.81
GABRE-209ENST00000486255 RHOXF2BP0C7M4 288 aa9.96□□□□□ -0.81
GABRE-209ENST00000486255 ALDH3A1P30838 453 aa9.96□□□□□ -0.81
GABRE-209ENST00000486255 CFAP157Q5JU67 520 aa9.96□□□□□ -0.81
GABRE-209ENST00000486255 RHOXF2Q9BQY4 288 aa9.96□□□□□ -0.81
GABRE-209ENST00000486255 MINDY4BA8MYZ0 360 aa9.96□□□□□ -0.82
GABRE-209ENST00000486255 SYT1P21579 422 aa9.96□□□□□ -0.82
GABRE-209ENST00000486255 RRAGBQ5VZM2 374 aa9.96□□□□□ -0.82
GABRE-209ENST00000486255 CCDC102BQ68D86 513 aa9.96□□□□□ -0.82
GABRE-209ENST00000486255 SYCP3Q8IZU3 236 aa9.96□□□□□ -0.82
GABRE-209ENST00000486255 ZBTB9Q96C00 473 aa9.96□□□□□ -0.82
GABRE-209ENST00000486255 LARP6Q9BRS8 491 aaKnown RBP9.96□□□□□ -0.82
GABRE-209ENST00000486255 LRRC27Q9C0I9 530 aa9.96□□□□□ -0.82
GABRE-209ENST00000486255 NPATQ14207 1427 aa9.96□□□□□ -0.82
GABRE-209ENST00000486255 FAM160A1Q05DH4 1040 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms