RNA–Protein interactions for RNA: ENST00000485758.1

TPRKB-208, Transcript of TP53RK binding protein, human

TSL 2

Gene TPRKB, Length 730 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPRKB-208	ENST00000485758	SF3B3	Q15393	1217 aa	Known RBP	13.38	□□□□□ -0.27
TPRKB-208	ENST00000485758	CCDC93	Q567U6	631 aa		13.38	□□□□□ -0.27
TPRKB-208	ENST00000485758	BEND3	Q5T5X7	828 aa		13.38	□□□□□ -0.27
TPRKB-208	ENST00000485758	JARID2	Q92833	1246 aa	Predicted RBP	13.38	□□□□□ -0.27
TPRKB-208	ENST00000485758	LTBP3	Q9NS15	1303 aa		13.38	□□□□□ -0.27
TPRKB-208	ENST00000485758		H7C1W4	665 aa		13.37	□□□□□ -0.27
TPRKB-208	ENST00000485758	PPEF1	O14829	653 aa	Predicted RBP	13.37	□□□□□ -0.27
TPRKB-208	ENST00000485758	PDE8A	O60658	829 aa		13.37	□□□□□ -0.27
TPRKB-208	ENST00000485758	RARS	P54136	660 aa	Known RBP	13.37	□□□□□ -0.27
TPRKB-208	ENST00000485758	BRPF1	P55201	1214 aa	Predicted RBP	13.37	□□□□□ -0.27
TPRKB-208	ENST00000485758	DDX46	Q7L014	1031 aa	Known RBP	13.37	□□□□□ -0.27
TPRKB-208	ENST00000485758	PRELP	P51888	382 aa		13.36	□□□□□ -0.27
TPRKB-208	ENST00000485758	MKRN3	Q13064	507 aa	Known RBP	13.36	□□□□□ -0.27
TPRKB-208	ENST00000485758	GRAP	Q13588	217 aa		13.36	□□□□□ -0.27
TPRKB-208	ENST00000485758	C9orf131	Q5VYM1	1079 aa		13.36	□□□□□ -0.27
TPRKB-208	ENST00000485758	SLC4A10	Q6U841	1118 aa		13.36	□□□□□ -0.27
TPRKB-208	ENST00000485758	OLFM4	Q6UX06	510 aa		13.36	□□□□□ -0.27
TPRKB-208	ENST00000485758	UBE3B	Q7Z3V4	1068 aa		13.36	□□□□□ -0.27
TPRKB-208	ENST00000485758	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.36	□□□□□ -0.27
TPRKB-208	ENST00000485758	GRAPL	Q8TC17	118 aa	Predicted RBP	13.36	□□□□□ -0.27
TPRKB-208	ENST00000485758	TAOK3	Q9H2K8	898 aa		13.36	□□□□□ -0.27
TPRKB-208	ENST00000485758	RNF181	Q9P0P0	153 aa		13.36	□□□□□ -0.27
TPRKB-208	ENST00000485758	ALDH1L1	O75891	902 aa		13.35	□□□□□ -0.27
TPRKB-208	ENST00000485758	BBOX1	O75936	387 aa		13.35	□□□□□ -0.27
TPRKB-208	ENST00000485758	LMNB1	P20700	586 aa		13.35	□□□□□ -0.27
TPRKB-208	ENST00000485758	CASP7	P55210	303 aa		13.35	□□□□□ -0.27
TPRKB-208	ENST00000485758	CC2D2B	Q6DHV5	1058 aa		13.35	□□□□□ -0.27
TPRKB-208	ENST00000485758	RTKN2	Q8IZC4	609 aa		13.35	□□□□□ -0.27
TPRKB-208	ENST00000485758	MARVELD3	Q96A59	401 aa		13.35	□□□□□ -0.27
TPRKB-208	ENST00000485758	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.35	□□□□□ -0.27
TPRKB-208	ENST00000485758	SRCIN1	Q9C0H9	1055 aa		13.35	□□□□□ -0.27
TPRKB-208	ENST00000485758	LTBP1	Q14766	1721 aa		13.35	□□□□□ -0.27
TPRKB-208	ENST00000485758	CTSW	P56202	376 aa		13.34	□□□□□ -0.27
TPRKB-208	ENST00000485758	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
TPRKB-208	ENST00000485758	CCDC152	Q4G0S7	254 aa		13.34	□□□□□ -0.27
TPRKB-208	ENST00000485758	SLC51A	Q86UW1	340 aa		13.34	□□□□□ -0.27
TPRKB-208	ENST00000485758	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.34	□□□□□ -0.27
TPRKB-208	ENST00000485758	PLA2G12B	Q9BX93	195 aa		13.34	□□□□□ -0.27
TPRKB-208	ENST00000485758	ATP6V0A2	Q9Y487	856 aa		13.34	□□□□□ -0.27
TPRKB-208	ENST00000485758	KIF16B	Q96L93	1317 aa		13.34	□□□□□ -0.27
TPRKB-208	ENST00000485758	RTL9	Q8NET4	1388 aa		13.33	□□□□□ -0.27
TPRKB-208	ENST00000485758	GRM8	O00222	908 aa		13.33	□□□□□ -0.28
TPRKB-208	ENST00000485758	PDAP1	Q13442	181 aa	Known RBP	13.33	□□□□□ -0.28
TPRKB-208	ENST00000485758	GRIPAP1	Q4V328	841 aa		13.33	□□□□□ -0.28
TPRKB-208	ENST00000485758	TMC4	Q7Z404	712 aa		13.33	□□□□□ -0.28
TPRKB-208	ENST00000485758	SPNS2	Q8IVW8	549 aa		13.33	□□□□□ -0.28
TPRKB-208	ENST00000485758	CELF1	Q92879	486 aa	Known RBP	13.33	□□□□□ -0.28
TPRKB-208	ENST00000485758	NOB1	Q9ULX3	412 aa	Known RBP	13.33	□□□□□ -0.28
TPRKB-208	ENST00000485758	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.33	□□□□□ -0.28
TPRKB-208	ENST00000485758	DUOX1	Q9NRD9	1551 aa		13.32	□□□□□ -0.28
TPRKB-208	ENST00000485758		A0A1B0GUL6	1792 aa		13.32	□□□□□ -0.28
TPRKB-208	ENST00000485758	SP8	Q8IXZ3	490 aa		13.32	□□□□□ -0.28
TPRKB-208	ENST00000485758	TTLL11	Q8NHH1	800 aa		13.32	□□□□□ -0.28
TPRKB-208	ENST00000485758	PSMD1	Q99460	953 aa		13.32	□□□□□ -0.28
TPRKB-208	ENST00000485758	TMX4	Q9H1E5	349 aa	Predicted RBP	13.32	□□□□□ -0.28
TPRKB-208	ENST00000485758	SEC31B	Q9NQW1	1179 aa		13.32	□□□□□ -0.28
TPRKB-208	ENST00000485758	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.31	□□□□□ -0.28
TPRKB-208	ENST00000485758	API5	Q9BZZ5	524 aa	Known RBP	13.31	□□□□□ -0.28
TPRKB-208	ENST00000485758	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.31	□□□□□ -0.28
TPRKB-208	ENST00000485758	BCAR3	O75815	825 aa		13.3	□□□□□ -0.28
TPRKB-208	ENST00000485758	CSF1R	P07333	972 aa		13.3	□□□□□ -0.28
TPRKB-208	ENST00000485758	RPS8	P62241	208 aa	Known RBP	13.3	□□□□□ -0.28
TPRKB-208	ENST00000485758	MMRN1	Q13201	1228 aa		13.3	□□□□□ -0.28
TPRKB-208	ENST00000485758	DPY19L2	Q6NUT2	758 aa		13.3	□□□□□ -0.28
TPRKB-208	ENST00000485758	ARHGAP45	Q92619	1136 aa		13.3	□□□□□ -0.28
TPRKB-208	ENST00000485758	GREM2	Q9H772	168 aa		13.3	□□□□□ -0.28
TPRKB-208	ENST00000485758	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.3	□□□□□ -0.28
TPRKB-208	ENST00000485758	UTY	O14607	1347 aa		13.3	□□□□□ -0.28
TPRKB-208	ENST00000485758	COL4A5	P29400	1685 aa		13.3	□□□□□ -0.28
TPRKB-208	ENST00000485758	POTEB3	A0JP26	581 aa		13.29	□□□□□ -0.28
TPRKB-208	ENST00000485758	IARS	P41252	1262 aa	Known RBP	13.29	□□□□□ -0.28
TPRKB-208	ENST00000485758	CCT4	P50991	539 aa	Known RBP	13.29	□□□□□ -0.28
TPRKB-208	ENST00000485758	FOXO4	P98177	505 aa		13.29	□□□□□ -0.28
TPRKB-208	ENST00000485758	POTEB	Q6S5H4	581 aa		13.29	□□□□□ -0.28
TPRKB-208	ENST00000485758	ANKRD18A	Q8IVF6	992 aa		13.29	□□□□□ -0.28
TPRKB-208	ENST00000485758	MPND	Q8N594	471 aa		13.29	□□□□□ -0.28
TPRKB-208	ENST00000485758	SPOCK2	Q92563	424 aa		13.29	□□□□□ -0.28
TPRKB-208	ENST00000485758	CDC5L	Q99459	802 aa	Known RBP	13.29	□□□□□ -0.28
TPRKB-208	ENST00000485758	WDR90	Q96KV7	1748 aa		13.28	□□□□□ -0.28
TPRKB-208	ENST00000485758	IPO8	O15397	1037 aa	Known RBP	13.28	□□□□□ -0.28
TPRKB-208	ENST00000485758	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.28	□□□□□ -0.28
TPRKB-208	ENST00000485758	FAM161A	Q3B820	660 aa		13.28	□□□□□ -0.28
TPRKB-208	ENST00000485758	DPP8	Q6V1X1	898 aa	Predicted RBP	13.28	□□□□□ -0.28
TPRKB-208	ENST00000485758	ZNF526	Q8TF50	670 aa	Predicted RBP	13.28	□□□□□ -0.28
TPRKB-208	ENST00000485758	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.28	□□□□□ -0.28
TPRKB-208	ENST00000485758	ITGA6	P23229	1130 aa		13.27	□□□□□ -0.29
TPRKB-208	ENST00000485758	EPHA10	Q5JZY3	1008 aa		13.27	□□□□□ -0.29
TPRKB-208	ENST00000485758	SUPT20H	Q8NEM7	779 aa		13.27	□□□□□ -0.29
TPRKB-208	ENST00000485758	SUCLG2	Q96I99	432 aa		13.27	□□□□□ -0.29
TPRKB-208	ENST00000485758	VPS33B	Q9H267	617 aa		13.27	□□□□□ -0.29
TPRKB-208	ENST00000485758	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.27	□□□□□ -0.29
TPRKB-208	ENST00000485758	TRIM27	P14373	513 aa		13.26	□□□□□ -0.29
TPRKB-208	ENST00000485758	GPSM2	P81274	684 aa		13.26	□□□□□ -0.29
TPRKB-208	ENST00000485758	LMBR1L	Q6UX01	489 aa		13.26	□□□□□ -0.29
TPRKB-208	ENST00000485758	ATF7IP	Q6VMQ6	1270 aa		13.26	□□□□□ -0.29
TPRKB-208	ENST00000485758	KDM2B	Q8NHM5	1336 aa		13.26	□□□□□ -0.29
TPRKB-208	ENST00000485758	FRAT1	Q92837	279 aa	Predicted RBP	13.26	□□□□□ -0.29
TPRKB-208	ENST00000485758	KAZALD1	Q96I82	304 aa		13.26	□□□□□ -0.29
TPRKB-208	ENST00000485758	USP44	Q9H0E7	712 aa		13.26	□□□□□ -0.29
TPRKB-208	ENST00000485758	PSME4	Q14997	1843 aa		13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms