RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 PIM2Q9P1W9 311 aa21.76■■□□□ 1.07
CHMP3-207ENST00000485465 DLEC1Q9Y238 1755 aa21.76■■□□□ 1.07
CHMP3-207ENST00000485465 KDM2BQ8NHM5 1336 aa21.76■■□□□ 1.07
CHMP3-207ENST00000485465 PRPF40BQ6NWY9 871 aaKnown RBP21.75■■□□□ 1.07
CHMP3-207ENST00000485465 CENPQQ7L2Z9 268 aaPredicted RBP21.75■■□□□ 1.07
CHMP3-207ENST00000485465 ERC1Q8IUD2 1116 aa21.75■■□□□ 1.07
CHMP3-207ENST00000485465 MINPP1Q9UNW1 487 aa21.75■■□□□ 1.07
CHMP3-207ENST00000485465 SASH1O94885 1247 aa21.74■■□□□ 1.07
CHMP3-207ENST00000485465 SP8Q8IXZ3 490 aa21.74■■□□□ 1.07
CHMP3-207ENST00000485465 MROH5Q6ZUA9 1318 aa21.74■■□□□ 1.07
CHMP3-207ENST00000485465 APBB1O00213 710 aa21.73■■□□□ 1.07
CHMP3-207ENST00000485465 METTL24Q5JXM2 366 aa21.73■■□□□ 1.07
CHMP3-207ENST00000485465 SYT17Q9BSW7 474 aa21.73■■□□□ 1.07
CHMP3-207ENST00000485465 ATP6V0A2Q9Y487 856 aa21.73■■□□□ 1.07
CHMP3-207ENST00000485465 SPEF2Q9C093 1822 aa21.73■■□□□ 1.07
CHMP3-207ENST00000485465 CHRNDQ07001 517 aa21.72■■□□□ 1.07
CHMP3-207ENST00000485465 RHPN1Q8TCX5 695 aa21.72■■□□□ 1.07
CHMP3-207ENST00000485465 KIF1BPQ96EK5 621 aa21.72■■□□□ 1.07
CHMP3-207ENST00000485465 CEP126Q9P2H0 1117 aa21.72■■□□□ 1.07
CHMP3-207ENST00000485465 TFCP2Q12800 502 aa21.71■■□□□ 1.07
CHMP3-207ENST00000485465 DALRD3Q5D0E6 543 aaKnown RBP21.71■■□□□ 1.07
CHMP3-207ENST00000485465 SLC51AQ86UW1 340 aa21.71■■□□□ 1.07
CHMP3-207ENST00000485465 C7orf43Q8WVR3 580 aa21.71■■□□□ 1.07
CHMP3-207ENST00000485465 LRRCC1Q9C099 1032 aa21.71■■□□□ 1.07
CHMP3-207ENST00000485465 ANKRD2Q9GZV1 360 aa21.71■■□□□ 1.07
CHMP3-207ENST00000485465 ANKRD45Q5TZF3 282 aa21.7■■□□□ 1.06
CHMP3-207ENST00000485465 VGLL2Q8N8G2 317 aa21.7■■□□□ 1.06
CHMP3-207ENST00000485465 HELBQ8NG08 1087 aaPredicted RBP21.7■■□□□ 1.06
CHMP3-207ENST00000485465 TMX4Q9H1E5 349 aaPredicted RBP21.7■■□□□ 1.06
CHMP3-207ENST00000485465 SLX4Q8IY92 1834 aa21.7■■□□□ 1.06
CHMP3-207ENST00000485465 PDE8BO95263 885 aa21.69■■□□□ 1.06
CHMP3-207ENST00000485465 ZNF219Q9P2Y4 722 aaPredicted RBP21.69■■□□□ 1.06
CHMP3-207ENST00000485465 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.69■■□□□ 1.06
CHMP3-207ENST00000485465 C21orf2O43822 256 aa21.68■■□□□ 1.06
CHMP3-207ENST00000485465 SMARCA5O60264 1052 aaPredicted RBP21.68■■□□□ 1.06
CHMP3-207ENST00000485465 TAF5LO75529 589 aa21.68■■□□□ 1.06
CHMP3-207ENST00000485465 GPSM2P81274 684 aa21.68■■□□□ 1.06
CHMP3-207ENST00000485465 NUCB1Q02818 461 aa21.68■■□□□ 1.06
CHMP3-207ENST00000485465 CC2D2BQ6DHV5 1058 aa21.68■■□□□ 1.06
CHMP3-207ENST00000485465 OLFM4Q6UX06 510 aa21.68■■□□□ 1.06
CHMP3-207ENST00000485465 IL1RAPL2Q9NP60 686 aa21.68■■□□□ 1.06
CHMP3-207ENST00000485465 WWC3Q9ULE0 1092 aa21.68■■□□□ 1.06
CHMP3-207ENST00000485465 BRCA1P38398 1863 aaKnown RBP21.67■■□□□ 1.06
CHMP3-207ENST00000485465 CACNA1SQ13698 1873 aa21.67■■□□□ 1.06
CHMP3-207ENST00000485465 LRRC37AA6NMS7 1700 aa21.67■■□□□ 1.06
CHMP3-207ENST00000485465 GPR108Q9NPR9 543 aa21.67■■□□□ 1.06
CHMP3-207ENST00000485465 ANKIB1Q9P2G1 1089 aa21.67■■□□□ 1.06
CHMP3-207ENST00000485465 ZBTB47Q9UFB7 747 aaPredicted RBP21.67■■□□□ 1.06
CHMP3-207ENST00000485465 XDHP47989 1333 aa21.66■■□□□ 1.06
CHMP3-207ENST00000485465 PODXL2Q9NZ53 605 aa21.66■■□□□ 1.06
CHMP3-207ENST00000485465 NSFL1CQ9UNZ2 370 aaKnown RBP21.66■■□□□ 1.06
CHMP3-207ENST00000485465 BCS1LQ9Y276 419 aa21.66■■□□□ 1.06
CHMP3-207ENST00000485465 AKAP2Q9Y2D5 859 aa21.66■■□□□ 1.06
CHMP3-207ENST00000485465 PUM3Q15397 648 aaKnown RBP21.65■■□□□ 1.06
CHMP3-207ENST00000485465 TNNI3KQ59H18 835 aa21.65■■□□□ 1.06
CHMP3-207ENST00000485465 SOGA3Q5TF21 947 aa21.65■■□□□ 1.06
CHMP3-207ENST00000485465 CHD1LQ86WJ1 897 aa21.65■■□□□ 1.06
CHMP3-207ENST00000485465 CLASRPQ8N2M8 674 aaKnown RBP21.65■■□□□ 1.06
CHMP3-207ENST00000485465 MPNDQ8N594 471 aa21.65■■□□□ 1.06
CHMP3-207ENST00000485465 FPGT-TNNI3KV9GXZ4 949 aa21.65■■□□□ 1.06
CHMP3-207ENST00000485465 SNAP23O00161 211 aa21.64■■□□□ 1.05
CHMP3-207ENST00000485465 FGFR2P21802 821 aa21.64■■□□□ 1.05
CHMP3-207ENST00000485465 ATP2B4P23634 1241 aa21.64■■□□□ 1.05
CHMP3-207ENST00000485465 UBE4AQ14139 1066 aa21.64■■□□□ 1.05
CHMP3-207ENST00000485465 ATP2B3Q16720 1220 aa21.64■■□□□ 1.05
CHMP3-207ENST00000485465 GRIPAP1Q4V328 841 aa21.64■■□□□ 1.05
CHMP3-207ENST00000485465 CCDC93Q567U6 631 aa21.64■■□□□ 1.05
CHMP3-207ENST00000485465 EAF2Q96CJ1 260 aaPredicted RBP21.64■■□□□ 1.05
CHMP3-207ENST00000485465 LNPKQ9C0E8 428 aa21.64■■□□□ 1.05
CHMP3-207ENST00000485465 BCL11AQ9H165 835 aa21.64■■□□□ 1.05
CHMP3-207ENST00000485465 GGA1Q9UJY5 639 aa21.64■■□□□ 1.05
CHMP3-207ENST00000485465 LEMD3Q9Y2U8 911 aa21.64■■□□□ 1.05
CHMP3-207ENST00000485465 WTIPA6NIX2 430 aaPredicted RBP21.63■■□□□ 1.05
CHMP3-207ENST00000485465 KCNJ4P48050 445 aa21.63■■□□□ 1.05
CHMP3-207ENST00000485465 TIMM10P62072 90 aa21.63■■□□□ 1.05
CHMP3-207ENST00000485465 DPP8Q6V1X1 898 aaPredicted RBP21.63■■□□□ 1.05
CHMP3-207ENST00000485465 LPIN2Q92539 896 aa21.63■■□□□ 1.05
CHMP3-207ENST00000485465 A0A1B0GUL6 1792 aa21.63■■□□□ 1.05
CHMP3-207ENST00000485465 ZNF609O15014 1411 aa21.63■■□□□ 1.05
CHMP3-207ENST00000485465 ZNF804BA4D1E1 1349 aa21.62■■□□□ 1.05
CHMP3-207ENST00000485465 A0A1B0GUL7 405 aa21.62■■□□□ 1.05
CHMP3-207ENST00000485465 AACSQ86V21 672 aa21.62■■□□□ 1.05
CHMP3-207ENST00000485465 RTKN2Q8IZC4 609 aa21.62■■□□□ 1.05
CHMP3-207ENST00000485465 TBC1D16Q8TBP0 767 aa21.62■■□□□ 1.05
CHMP3-207ENST00000485465 POLLQ9UGP5 575 aa21.62■■□□□ 1.05
CHMP3-207ENST00000485465 SNED1Q8TER0 1413 aa21.62■■□□□ 1.05
CHMP3-207ENST00000485465 UFL1O94874 794 aa21.61■■□□□ 1.05
CHMP3-207ENST00000485465 SLC5A1P13866 664 aa21.61■■□□□ 1.05
CHMP3-207ENST00000485465 C16orf71Q8IYS4 520 aaPredicted RBP21.61■■□□□ 1.05
CHMP3-207ENST00000485465 NEUROD6Q96NK8 337 aa21.61■■□□□ 1.05
CHMP3-207ENST00000485465 CCDC8Q9H0W5 538 aaPredicted RBP21.61■■□□□ 1.05
CHMP3-207ENST00000485465 LTBP1Q14766 1721 aa21.6■■□□□ 1.05
CHMP3-207ENST00000485465 C6orf229H3BNL8 230 aa21.6■■□□□ 1.05
CHMP3-207ENST00000485465 IFIT2P09913 472 aaKnown RBP21.6■■□□□ 1.05
CHMP3-207ENST00000485465 IFIT1P09914 478 aaKnown RBP21.6■■□□□ 1.05
CHMP3-207ENST00000485465 RTFDC1Q9BY42 306 aaPredicted RBP21.6■■□□□ 1.05
CHMP3-207ENST00000485465 XAGE2Q96GT9 111 aa21.59■■□□□ 1.05
CHMP3-207ENST00000485465 DUOX1Q9NRD9 1551 aa21.58■■□□□ 1.05
CHMP3-207ENST00000485465 ADORA1P30542 326 aa21.58■■□□□ 1.05
CHMP3-207ENST00000485465 C15orf52Q6ZUT6 534 aaKnown RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms