RNA–Protein interactions for RNA: ENST00000484620.1

PDLIM4-207, Transcript of PDZ and LIM domain 4, humanhuman

TSL 5

Gene PDLIM4, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-207ENST00000484620 LRRC24Q50LG9 513 aa23.57■■□□□ 1.36
PDLIM4-207ENST00000484620 CC2D2BQ6DHV5 1058 aa23.57■■□□□ 1.36
PDLIM4-207ENST00000484620 PUS3Q9BZE2 481 aaKnown RBP23.57■■□□□ 1.36
PDLIM4-207ENST00000484620 MROH5Q6ZUA9 1318 aa23.57■■□□□ 1.36
PDLIM4-207ENST00000484620 SOGA3Q5TF21 947 aa23.56■■□□□ 1.36
PDLIM4-207ENST00000484620 ERC1Q8IUD2 1116 aa23.56■■□□□ 1.36
PDLIM4-207ENST00000484620 ANKRD2Q9GZV1 360 aa23.56■■□□□ 1.36
PDLIM4-207ENST00000484620 DCTPP1Q9H773 170 aa23.56■■□□□ 1.36
PDLIM4-207ENST00000484620 PPP4R2Q9NY27 417 aa23.56■■□□□ 1.36
PDLIM4-207ENST00000484620 BCS1LQ9Y276 419 aa23.56■■□□□ 1.36
PDLIM4-207ENST00000484620 EXOC6BQ9Y2D4 811 aa23.56■■□□□ 1.36
PDLIM4-207ENST00000484620 RIPOR2Q9Y4F9 1068 aa23.56■■□□□ 1.36
PDLIM4-207ENST00000484620 RAB11FIP3O75154 756 aa23.55■■□□□ 1.36
PDLIM4-207ENST00000484620 METTL24Q5JXM2 366 aa23.55■■□□□ 1.36
PDLIM4-207ENST00000484620 ATG9AQ7Z3C6 839 aa23.55■■□□□ 1.36
PDLIM4-207ENST00000484620 GCC1Q96CN9 775 aa23.55■■□□□ 1.36
PDLIM4-207ENST00000484620 CCDC136Q96JN2 1154 aa23.55■■□□□ 1.36
PDLIM4-207ENST00000484620 WWC3Q9ULE0 1092 aa23.55■■□□□ 1.36
PDLIM4-207ENST00000484620 MINPP1Q9UNW1 487 aa23.55■■□□□ 1.36
PDLIM4-207ENST00000484620 ARFGEF1Q9Y6D6 1849 aa23.54■■□□□ 1.36
PDLIM4-207ENST00000484620 CHRNDQ07001 517 aa23.54■■□□□ 1.36
PDLIM4-207ENST00000484620 GRIPAP1Q4V328 841 aa23.54■■□□□ 1.36
PDLIM4-207ENST00000484620 ZNF219Q9P2Y4 722 aaPredicted RBP23.54■■□□□ 1.36
PDLIM4-207ENST00000484620 C21orf2O43822 256 aa23.53■■□□□ 1.36
PDLIM4-207ENST00000484620 IGHDP01880 384 aa23.53■■□□□ 1.36
PDLIM4-207ENST00000484620 C7orf43Q8WVR3 580 aa23.53■■□□□ 1.36
PDLIM4-207ENST00000484620 CEP126Q9P2H0 1117 aa23.53■■□□□ 1.36
PDLIM4-207ENST00000484620 A0A1B0GUL6 1792 aa23.52■■□□□ 1.36
PDLIM4-207ENST00000484620 CCDC93Q567U6 631 aa23.52■■□□□ 1.36
PDLIM4-207ENST00000484620 ANKIB1Q9P2G1 1089 aa23.52■■□□□ 1.36
PDLIM4-207ENST00000484620 XDHP47989 1333 aa23.52■■□□□ 1.36
PDLIM4-207ENST00000484620 KIF1BPQ96EK5 621 aa23.51■■□□□ 1.35
PDLIM4-207ENST00000484620 NSFL1CQ9UNZ2 370 aaKnown RBP23.51■■□□□ 1.35
PDLIM4-207ENST00000484620 APBB1O00213 710 aa23.5■■□□□ 1.35
PDLIM4-207ENST00000484620 RTKN2Q8IZC4 609 aa23.5■■□□□ 1.35
PDLIM4-207ENST00000484620 MPNDQ8N594 471 aa23.5■■□□□ 1.35
PDLIM4-207ENST00000484620 ZBTB47Q9UFB7 747 aaPredicted RBP23.5■■□□□ 1.35
PDLIM4-207ENST00000484620 SASH1O94885 1247 aa23.49■■□□□ 1.35
PDLIM4-207ENST00000484620 PDE8BO95263 885 aa23.49■■□□□ 1.35
PDLIM4-207ENST00000484620 KCNJ4P48050 445 aa23.49■■□□□ 1.35
PDLIM4-207ENST00000484620 GPSM2P81274 684 aa23.49■■□□□ 1.35
PDLIM4-207ENST00000484620 TFCP2Q12800 502 aa23.49■■□□□ 1.35
PDLIM4-207ENST00000484620 OLFM4Q6UX06 510 aa23.49■■□□□ 1.35
PDLIM4-207ENST00000484620 DPP8Q6V1X1 898 aaPredicted RBP23.49■■□□□ 1.35
PDLIM4-207ENST00000484620 SMC5Q8IY18 1101 aa23.49■■□□□ 1.35
PDLIM4-207ENST00000484620 HELBQ8NG08 1087 aaPredicted RBP23.49■■□□□ 1.35
PDLIM4-207ENST00000484620 RHPN1Q8TCX5 695 aa23.49■■□□□ 1.35
PDLIM4-207ENST00000484620 LRRCC1Q9C099 1032 aa23.49■■□□□ 1.35
PDLIM4-207ENST00000484620 PODXL2Q9NZ53 605 aa23.49■■□□□ 1.35
PDLIM4-207ENST00000484620 TAF5LO75529 589 aa23.48■■□□□ 1.35
PDLIM4-207ENST00000484620 ATP2B4P23634 1241 aa23.48■■□□□ 1.35
PDLIM4-207ENST00000484620 PELP1Q8IZL8 1130 aaKnown RBP23.48■■□□□ 1.35
PDLIM4-207ENST00000484620 VGLL2Q8N8G2 317 aa23.48■■□□□ 1.35
PDLIM4-207ENST00000484620 GGA1Q9UJY5 639 aa23.48■■□□□ 1.35
PDLIM4-207ENST00000484620 AKAP2Q9Y2D5 859 aa23.48■■□□□ 1.35
PDLIM4-207ENST00000484620 LEMD3Q9Y2U8 911 aa23.48■■□□□ 1.35
PDLIM4-207ENST00000484620 PUM3Q15397 648 aaKnown RBP23.47■■□□□ 1.35
PDLIM4-207ENST00000484620 B4GALNT3Q6L9W6 998 aa23.47■■□□□ 1.35
PDLIM4-207ENST00000484620 CENPQQ7L2Z9 268 aaPredicted RBP23.47■■□□□ 1.35
PDLIM4-207ENST00000484620 SLC51AQ86UW1 340 aa23.47■■□□□ 1.35
PDLIM4-207ENST00000484620 LTBP1Q14766 1721 aa23.47■■□□□ 1.35
PDLIM4-207ENST00000484620 UFL1O94874 794 aa23.46■■□□□ 1.35
PDLIM4-207ENST00000484620 SUPT20HQ8NEM7 779 aa23.46■■□□□ 1.35
PDLIM4-207ENST00000484620 GPR108Q9NPR9 543 aa23.46■■□□□ 1.35
PDLIM4-207ENST00000484620 SNED1Q8TER0 1413 aa23.45■■□□□ 1.34
PDLIM4-207ENST00000484620 ZNF804BA4D1E1 1349 aa23.45■■□□□ 1.34
PDLIM4-207ENST00000484620 UBE4AQ14139 1066 aa23.45■■□□□ 1.34
PDLIM4-207ENST00000484620 ATP2B3Q16720 1220 aa23.45■■□□□ 1.34
PDLIM4-207ENST00000484620 CLASRPQ8N2M8 674 aaKnown RBP23.45■■□□□ 1.34
PDLIM4-207ENST00000484620 GTF3C3Q9Y5Q9 886 aa23.45■■□□□ 1.34
PDLIM4-207ENST00000484620 KDM2BQ8NHM5 1336 aa23.44■■□□□ 1.34
PDLIM4-207ENST00000484620 C6orf229H3BNL8 230 aa23.44■■□□□ 1.34
PDLIM4-207ENST00000484620 GPR162Q16538 588 aa23.44■■□□□ 1.34
PDLIM4-207ENST00000484620 ANKRD45Q5TZF3 282 aa23.44■■□□□ 1.34
PDLIM4-207ENST00000484620 TBC1D16Q8TBP0 767 aa23.44■■□□□ 1.34
PDLIM4-207ENST00000484620 PSMD1Q99460 953 aa23.44■■□□□ 1.34
PDLIM4-207ENST00000484620 FER1L6Q2WGJ9 1857 aa23.44■■□□□ 1.34
PDLIM4-207ENST00000484620 ZNF609O15014 1411 aa23.43■■□□□ 1.34
PDLIM4-207ENST00000484620 IFIT1P09914 478 aaKnown RBP23.43■■□□□ 1.34
PDLIM4-207ENST00000484620 SLC5A1P13866 664 aa23.43■■□□□ 1.34
PDLIM4-207ENST00000484620 TNNI3KQ59H18 835 aa23.43■■□□□ 1.34
PDLIM4-207ENST00000484620 LPIN2Q92539 896 aa23.43■■□□□ 1.34
PDLIM4-207ENST00000484620 EYA3Q99504 573 aa23.43■■□□□ 1.34
PDLIM4-207ENST00000484620 RTFDC1Q9BY42 306 aaPredicted RBP23.43■■□□□ 1.34
PDLIM4-207ENST00000484620 IL1RAPL2Q9NP60 686 aa23.43■■□□□ 1.34
PDLIM4-207ENST00000484620 FPGT-TNNI3KV9GXZ4 949 aa23.43■■□□□ 1.34
PDLIM4-207ENST00000484620 DUOX1Q9NRD9 1551 aa23.43■■□□□ 1.34
PDLIM4-207ENST00000484620 YBX3P16989 372 aaKnown RBP eCLIP23.42■■□□□ 1.34
PDLIM4-207ENST00000484620 FKBP4Q02790 459 aaKnown RBP eCLIP23.42■■□□□ 1.34
PDLIM4-207ENST00000484620 TAOK3Q9H2K8 898 aa23.42■■□□□ 1.34
PDLIM4-207ENST00000484620 POLLQ9UGP5 575 aa23.42■■□□□ 1.34
PDLIM4-207ENST00000484620 A0A1B0GUL7 405 aa23.41■■□□□ 1.34
PDLIM4-207ENST00000484620 FGFR2P21802 821 aa23.41■■□□□ 1.34
PDLIM4-207ENST00000484620 LTBP3Q9NS15 1303 aa23.4■■□□□ 1.34
PDLIM4-207ENST00000484620 ARAP2Q8WZ64 1704 aa23.4■■□□□ 1.34
PDLIM4-207ENST00000484620 SMARCA5O60264 1052 aaPredicted RBP23.4■■□□□ 1.34
PDLIM4-207ENST00000484620 GRIN3BO60391 1043 aa23.4■■□□□ 1.34
PDLIM4-207ENST00000484620 NUCB1Q02818 461 aa23.4■■□□□ 1.34
PDLIM4-207ENST00000484620 ARHGAP27Q6ZUM4 889 aa23.4■■□□□ 1.34
PDLIM4-207ENST00000484620 AACSQ86V21 672 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms