RNA–Protein interactions for RNA: ENST00000484388.1

ABCA4-206, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 2

Gene ABCA4, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-206ENST00000484388 NXPE4Q6UWF7 544 aa3.56□□□□□ -1.84
ABCA4-206ENST00000484388 KRT25Q7Z3Z0 450 aa3.56□□□□□ -1.84
ABCA4-206ENST00000484388 NANOS1Q8WY41 292 aaKnown RBP3.56□□□□□ -1.84
ABCA4-206ENST00000484388 GTPBP3Q969Y2 492 aaKnown RBP3.56□□□□□ -1.84
ABCA4-206ENST00000484388 ABHD17AQ96GS6 310 aa3.56□□□□□ -1.84
ABCA4-206ENST00000484388 SLC30A3Q99726 388 aa3.56□□□□□ -1.84
ABCA4-206ENST00000484388 BCO2Q9BYV7 579 aa3.56□□□□□ -1.84
ABCA4-206ENST00000484388 TGIF2Q9GZN2 237 aa3.56□□□□□ -1.84
ABCA4-206ENST00000484388 PPP4R2Q9NY27 417 aa3.56□□□□□ -1.84
ABCA4-206ENST00000484388 PPFIA3O75145 1194 aa3.55□□□□□ -1.84
ABCA4-206ENST00000484388 USP17L7P0C7H9 530 aa3.55□□□□□ -1.84
ABCA4-206ENST00000484388 XRCC5P13010 732 aaKnown RBP3.55□□□□□ -1.84
ABCA4-206ENST00000484388 SNRPBP14678 240 aaKnown RBP3.55□□□□□ -1.84
ABCA4-206ENST00000484388 NFKB1P19838 968 aa3.55□□□□□ -1.84
ABCA4-206ENST00000484388 CD33P20138 364 aa3.55□□□□□ -1.84
ABCA4-206ENST00000484388 GSTT1P30711 240 aa3.55□□□□□ -1.84
ABCA4-206ENST00000484388 PLAURQ03405 335 aa3.55□□□□□ -1.84
ABCA4-206ENST00000484388 GRM2Q14416 872 aa3.55□□□□□ -1.84
ABCA4-206ENST00000484388 GRIN2CQ14957 1233 aa3.55□□□□□ -1.84
ABCA4-206ENST00000484388 TAF1CQ15572 869 aaPredicted RBP3.55□□□□□ -1.84
ABCA4-206ENST00000484388 PCSK7Q16549 785 aa3.55□□□□□ -1.84
ABCA4-206ENST00000484388 DHX32Q7L7V1 743 aaKnown RBP3.55□□□□□ -1.84
ABCA4-206ENST00000484388 NT5DC4Q86YG4 428 aa3.55□□□□□ -1.84
ABCA4-206ENST00000484388 CEP120Q8N960 986 aa3.55□□□□□ -1.84
ABCA4-206ENST00000484388 GLIS3Q8NEA6 775 aa3.55□□□□□ -1.84
ABCA4-206ENST00000484388 TRPM4Q8TD43 1214 aa3.55□□□□□ -1.84
ABCA4-206ENST00000484388 TRERF1Q96PN7 1200 aa3.55□□□□□ -1.84
ABCA4-206ENST00000484388 AVENQ9NQS1 362 aaPredicted RBP3.55□□□□□ -1.84
ABCA4-206ENST00000484388 LATS2Q9NRM7 1088 aa3.55□□□□□ -1.84
ABCA4-206ENST00000484388 KANSL3Q9P2N6 904 aa3.55□□□□□ -1.84
ABCA4-206ENST00000484388 TMEM238LA0A1B0GVL6 79 aa3.54□□□□□ -1.84
ABCA4-206ENST00000484388 C11orf95C9JLR9 678 aaPredicted RBP3.54□□□□□ -1.84
ABCA4-206ENST00000484388 IGSF3O75054 1194 aa3.54□□□□□ -1.84
ABCA4-206ENST00000484388 SIN3BO75182 1162 aa3.54□□□□□ -1.84
ABCA4-206ENST00000484388 GPLD1P80108 840 aa3.54□□□□□ -1.84
ABCA4-206ENST00000484388 CTBSQ01459 385 aa3.54□□□□□ -1.84
ABCA4-206ENST00000484388 NAALADL2Q58DX5 795 aa3.54□□□□□ -1.84
ABCA4-206ENST00000484388 COL13A1Q5TAT6 717 aaPredicted RBP3.54□□□□□ -1.84
ABCA4-206ENST00000484388 ZNF468Q5VIY5 522 aaPredicted RBP3.54□□□□□ -1.84
ABCA4-206ENST00000484388 C9orf131Q5VYM1 1079 aa3.54□□□□□ -1.84
ABCA4-206ENST00000484388 SV2AQ7L0J3 742 aa3.54□□□□□ -1.84
ABCA4-206ENST00000484388 HS2ST1Q7LGA3 356 aa3.54□□□□□ -1.84
ABCA4-206ENST00000484388 CCNJLQ8IV13 435 aa3.54□□□□□ -1.84
ABCA4-206ENST00000484388 SLC43A3Q8NBI5 491 aa3.54□□□□□ -1.84
ABCA4-206ENST00000484388 C3orf58Q8NDZ4 430 aa3.54□□□□□ -1.84
ABCA4-206ENST00000484388 SREK1Q8WXA9 508 aaKnown RBP3.54□□□□□ -1.84
ABCA4-206ENST00000484388 BHMTQ93088 406 aa3.54□□□□□ -1.84
ABCA4-206ENST00000484388 TCF12Q99081 682 aa3.54□□□□□ -1.84
ABCA4-206ENST00000484388 NOC4LQ9BVI4 516 aaKnown RBP3.54□□□□□ -1.84
ABCA4-206ENST00000484388 BHLHE41Q9C0J9 482 aaPredicted RBP3.54□□□□□ -1.84
ABCA4-206ENST00000484388 EHD4Q9H223 541 aa3.54□□□□□ -1.84
ABCA4-206ENST00000484388 ZFYVE1Q9HBF4 777 aa3.54□□□□□ -1.84
ABCA4-206ENST00000484388 PPM1HQ9ULR3 514 aa3.54□□□□□ -1.84
ABCA4-206ENST00000484388 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.54□□□□□ -1.84
ABCA4-206ENST00000484388 LOC102724428A0A0B4J2F2 783 aa3.53□□□□□ -1.84
ABCA4-206ENST00000484388 NFKBIEO00221 500 aa3.53□□□□□ -1.84
ABCA4-206ENST00000484388 ITPKAP23677 461 aa3.53□□□□□ -1.84
ABCA4-206ENST00000484388 SIK1P57059 783 aa3.53□□□□□ -1.84
ABCA4-206ENST00000484388 MEI1Q5TIA1 1274 aa3.53□□□□□ -1.84
ABCA4-206ENST00000484388 ERMP1Q7Z2K6 904 aa3.53□□□□□ -1.84
ABCA4-206ENST00000484388 NCAPG2Q86XI2 1143 aa3.53□□□□□ -1.84
ABCA4-206ENST00000484388 NPAS3Q8IXF0 933 aa3.53□□□□□ -1.84
ABCA4-206ENST00000484388 VWA5B2Q8N398 1253 aa3.53□□□□□ -1.84
ABCA4-206ENST00000484388 TMEM102Q8N9M5 508 aaPredicted RBP3.53□□□□□ -1.84
ABCA4-206ENST00000484388 SPACA7Q96KW9 195 aa3.53□□□□□ -1.84
ABCA4-206ENST00000484388 CNTNAP3BQ96NU0 1288 aa3.53□□□□□ -1.84
ABCA4-206ENST00000484388 OSMRQ99650 979 aa3.53□□□□□ -1.84
ABCA4-206ENST00000484388 ZKSCAN3Q9BRR0 538 aa3.53□□□□□ -1.84
ABCA4-206ENST00000484388 CNTNAP3Q9BZ76 1288 aa3.53□□□□□ -1.84
ABCA4-206ENST00000484388 LIN7BQ9HAP6 207 aa3.53□□□□□ -1.84
ABCA4-206ENST00000484388 ABCB6Q9NP58 842 aa3.53□□□□□ -1.84
ABCA4-206ENST00000484388 DZANK1Q9NVP4 752 aa3.53□□□□□ -1.84
ABCA4-206ENST00000484388 DDX41Q9UJV9 622 aaKnown RBP3.53□□□□□ -1.84
ABCA4-206ENST00000484388 PRR12Q9ULL5 1215 aa3.53□□□□□ -1.84
ABCA4-206ENST00000484388 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.53□□□□□ -1.84
ABCA4-206ENST00000484388 CDC14CA4D256 554 aa3.52□□□□□ -1.85
ABCA4-206ENST00000484388 ADARB2-AS1A8MUL3 147 aa3.52□□□□□ -1.85
ABCA4-206ENST00000484388 ZBTB42B2RXF5 422 aa3.52□□□□□ -1.85
ABCA4-206ENST00000484388 C2CD2LO14523 706 aa3.52□□□□□ -1.85
ABCA4-206ENST00000484388 LCE2BO14633 110 aa3.52□□□□□ -1.85
ABCA4-206ENST00000484388 ARAFP10398 606 aa3.52□□□□□ -1.85
ABCA4-206ENST00000484388 SF3A1Q15459 793 aaKnown RBP3.52□□□□□ -1.85
ABCA4-206ENST00000484388 RPS26P11Q5JNZ5 115 aaPredicted RBP3.52□□□□□ -1.85
ABCA4-206ENST00000484388 SV2BQ7L1I2 683 aa3.52□□□□□ -1.85
ABCA4-206ENST00000484388 SYT9Q86SS6 491 aa3.52□□□□□ -1.85
ABCA4-206ENST00000484388 ZNF654Q8IZM8 581 aa3.52□□□□□ -1.85
ABCA4-206ENST00000484388 TNFRSF25Q93038 417 aa3.52□□□□□ -1.85
ABCA4-206ENST00000484388 NXPE3Q969Y0 559 aa3.52□□□□□ -1.85
ABCA4-206ENST00000484388 DRC1Q96MC2 740 aa3.52□□□□□ -1.85
ABCA4-206ENST00000484388 MDFIQ99750 246 aa3.52□□□□□ -1.85
ABCA4-206ENST00000484388 TINF2Q9BSI4 451 aa3.52□□□□□ -1.85
ABCA4-206ENST00000484388 RSRP1Q9BUV0 290 aa3.52□□□□□ -1.85
ABCA4-206ENST00000484388 OXCT2Q9BYC2 517 aaPredicted RBP3.52□□□□□ -1.85
ABCA4-206ENST00000484388 PBX4Q9BYU1 374 aa3.52□□□□□ -1.85
ABCA4-206ENST00000484388 CCSER2Q9H7U1 834 aa3.52□□□□□ -1.85
ABCA4-206ENST00000484388 SRA1Q9HD15 236 aaKnown RBP3.52□□□□□ -1.85
ABCA4-206ENST00000484388 DNAJB12Q9NXW2 375 aaKnown RBP3.52□□□□□ -1.85
ABCA4-206ENST00000484388 GGT7Q9UJ14 662 aa3.52□□□□□ -1.85
ABCA4-206ENST00000484388 GPR25O00155 361 aa3.51□□□□□ -1.85
ABCA4-206ENST00000484388 PDE2AO00408 941 aaPredicted RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms