RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 RBM43Q6ZSC3 357 aaKnown RBP23.26■■□□□ 1.31
LIMS2-215ENST00000484252 DDX46Q7L014 1031 aaKnown RBP23.26■■□□□ 1.31
LIMS2-215ENST00000484252 MTERF4Q7Z6M4 381 aaKnown RBP23.26■■□□□ 1.31
LIMS2-215ENST00000484252 DSCC1Q9BVC3 393 aa23.26■■□□□ 1.31
LIMS2-215ENST00000484252 SPTLC3Q9NUV7 552 aa23.26■■□□□ 1.31
LIMS2-215ENST00000484252 CWC25Q9NXE8 425 aaPredicted RBP23.26■■□□□ 1.31
LIMS2-215ENST00000484252 IL15P40933 162 aaPredicted RBP23.25■■□□□ 1.31
LIMS2-215ENST00000484252 CLSTN2Q9H4D0 955 aa23.25■■□□□ 1.31
LIMS2-215ENST00000484252 TTC12Q9H892 705 aaPredicted RBP23.25■■□□□ 1.31
LIMS2-215ENST00000484252 DACT1Q9NYF0 836 aa23.25■■□□□ 1.31
LIMS2-215ENST00000484252 SMARCC2Q8TAQ2 1214 aa23.24■■□□□ 1.31
LIMS2-215ENST00000484252 DDX17Q92841 729 aaKnown RBP23.24■■□□□ 1.31
LIMS2-215ENST00000484252 BRF1Q92994 677 aa23.24■■□□□ 1.31
LIMS2-215ENST00000484252 ZNF830Q96NB3 372 aaPredicted RBP23.24■■□□□ 1.31
LIMS2-215ENST00000484252 SEC62Q99442 399 aaKnown RBP23.24■■□□□ 1.31
LIMS2-215ENST00000484252 CFAP45Q9UL16 551 aa23.24■■□□□ 1.31
LIMS2-215ENST00000484252 MRVI1Q9Y6F6 885 aa23.24■■□□□ 1.31
LIMS2-215ENST00000484252 H3BQV1 296 aa23.24■■□□□ 1.31
LIMS2-215ENST00000484252 JAK2O60674 1132 aa23.24■■□□□ 1.31
LIMS2-215ENST00000484252 PFKFB2O60825 505 aa23.24■■□□□ 1.31
LIMS2-215ENST00000484252 CHRNA2Q15822 529 aa23.24■■□□□ 1.31
LIMS2-215ENST00000484252 IFFO2Q5TF58 517 aa23.24■■□□□ 1.31
LIMS2-215ENST00000484252 DHX32Q7L7V1 743 aaKnown RBP23.24■■□□□ 1.31
LIMS2-215ENST00000484252 ATG9AQ7Z3C6 839 aa23.24■■□□□ 1.31
LIMS2-215ENST00000484252 PRIMPOLQ96LW4 560 aa23.24■■□□□ 1.31
LIMS2-215ENST00000484252 PAG1Q9NWQ8 432 aa23.24■■□□□ 1.31
LIMS2-215ENST00000484252 TFIP11Q9UBB9 837 aaKnown RBP23.24■■□□□ 1.31
LIMS2-215ENST00000484252 NDUFB9Q9Y6M9 179 aa23.24■■□□□ 1.31
LIMS2-215ENST00000484252 PLCB2Q00722 1185 aa23.23■■□□□ 1.31
LIMS2-215ENST00000484252 DNTTIP2Q5QJE6 756 aaKnown RBP23.23■■□□□ 1.31
LIMS2-215ENST00000484252 NBPF26B4DH59 902 aa23.23■■□□□ 1.31
LIMS2-215ENST00000484252 AP5Z1O43299 807 aa23.23■■□□□ 1.31
LIMS2-215ENST00000484252 NBPF14Q5TI25 921 aa23.23■■□□□ 1.31
LIMS2-215ENST00000484252 NBPF10Q6P3W6 841 aaKnown RBP23.23■■□□□ 1.31
LIMS2-215ENST00000484252 NBPF15Q8N660 670 aa23.23■■□□□ 1.31
LIMS2-215ENST00000484252 CABLES1Q8TDN4 633 aa23.23■■□□□ 1.31
LIMS2-215ENST00000484252 CHMP4CQ96CF2 233 aa23.23■■□□□ 1.31
LIMS2-215ENST00000484252 ATG3Q9NT62 314 aa23.23■■□□□ 1.31
LIMS2-215ENST00000484252 CHMP3Q9Y3E7 222 aa23.23■■□□□ 1.31
LIMS2-215ENST00000484252 KIF3AQ9Y496 699 aa23.23■■□□□ 1.31
LIMS2-215ENST00000484252 HMGN5P82970 282 aaKnown RBP23.22■■□□□ 1.31
LIMS2-215ENST00000484252 FGD1P98174 961 aa23.22■■□□□ 1.31
LIMS2-215ENST00000484252 NUP188Q5SRE5 1749 aa23.22■■□□□ 1.31
LIMS2-215ENST00000484252 CIAO1O76071 339 aa23.21■■□□□ 1.31
LIMS2-215ENST00000484252 CAMK4Q16566 473 aa23.21■■□□□ 1.31
LIMS2-215ENST00000484252 ZMYM1Q5SVZ6 1142 aa23.21■■□□□ 1.31
LIMS2-215ENST00000484252 NAA16Q6N069 864 aaPredicted RBP23.21■■□□□ 1.31
LIMS2-215ENST00000484252 CADPS2Q86UW7 1296 aa23.21■■□□□ 1.31
LIMS2-215ENST00000484252 SPATA31A3Q5VYP0 1347 aa23.21■■□□□ 1.31
LIMS2-215ENST00000484252 SPEF2Q9C093 1822 aa23.21■■□□□ 1.31
LIMS2-215ENST00000484252 SCRN1Q12765 414 aa23.21■■□□□ 1.31
LIMS2-215ENST00000484252 MPNDQ8N594 471 aa23.21■■□□□ 1.31
LIMS2-215ENST00000484252 CCDC191Q8NCU4 936 aa23.21■■□□□ 1.31
LIMS2-215ENST00000484252 NEUROD6Q96NK8 337 aa23.21■■□□□ 1.31
LIMS2-215ENST00000484252 PCDH11XQ9BZA7 1347 aa23.21■■□□□ 1.31
LIMS2-215ENST00000484252 PCDH11YQ9BZA8 1340 aa23.21■■□□□ 1.31
LIMS2-215ENST00000484252 ERVV-2B6SEH9 535 aa23.2■■□□□ 1.3
LIMS2-215ENST00000484252 GOLIM4O00461 696 aa23.2■■□□□ 1.3
LIMS2-215ENST00000484252 CAVIN2O95810 425 aa23.2■■□□□ 1.3
LIMS2-215ENST00000484252 STOX1Q6ZVD7 989 aa23.2■■□□□ 1.3
LIMS2-215ENST00000484252 BICD2Q8TD16 824 aa23.2■■□□□ 1.3
LIMS2-215ENST00000484252 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.2■■□□□ 1.3
LIMS2-215ENST00000484252 AGXT2Q9BYV1 514 aa23.2■■□□□ 1.3
LIMS2-215ENST00000484252 MYRIPQ8NFW9 859 aa23.2■■□□□ 1.3
LIMS2-215ENST00000484252 PGBD1Q96JS3 809 aa23.2■■□□□ 1.3
LIMS2-215ENST00000484252 TJP1Q07157 1748 aa23.19■■□□□ 1.3
LIMS2-215ENST00000484252 UBR2Q8IWV8 1755 aa23.19■■□□□ 1.3
LIMS2-215ENST00000484252 EYA2O00167 538 aa23.19■■□□□ 1.3
LIMS2-215ENST00000484252 CHGBP05060 677 aa23.19■■□□□ 1.3
LIMS2-215ENST00000484252 ATL3Q6DD88 541 aa23.19■■□□□ 1.3
LIMS2-215ENST00000484252 EXOSC10Q01780 885 aaKnown RBP23.18■■□□□ 1.3
LIMS2-215ENST00000484252 NSUN7Q8NE18 718 aaKnown RBP23.18■■□□□ 1.3
LIMS2-215ENST00000484252 ANO6Q4KMQ2 910 aa23.18■■□□□ 1.3
LIMS2-215ENST00000484252 CKAP2LQ8IYA6 745 aa23.18■■□□□ 1.3
LIMS2-215ENST00000484252 KIAA1524Q8TCG1 905 aa23.18■■□□□ 1.3
LIMS2-215ENST00000484252 CBX8Q9HC52 389 aa23.18■■□□□ 1.3
LIMS2-215ENST00000484252 RNF113AO15541 343 aaKnown RBP23.17■■□□□ 1.3
LIMS2-215ENST00000484252 RBM10P98175 930 aaKnown RBP23.17■■□□□ 1.3
LIMS2-215ENST00000484252 LRRFIP1Q32MZ4 808 aaKnown RBP23.17■■□□□ 1.3
LIMS2-215ENST00000484252 TTLL7Q6ZT98 887 aa23.17■■□□□ 1.3
LIMS2-215ENST00000484252 DDX11Q96FC9 970 aa23.17■■□□□ 1.3
LIMS2-215ENST00000484252 FAM13BQ9NYF5 915 aa23.17■■□□□ 1.3
LIMS2-215ENST00000484252 NR1I2O75469 434 aa23.17■■□□□ 1.3
LIMS2-215ENST00000484252 TIMM10P62072 90 aa23.17■■□□□ 1.3
LIMS2-215ENST00000484252 ZCRB1Q8TBF4 217 aaKnown RBP23.17■■□□□ 1.3
LIMS2-215ENST00000484252 LAMA4Q16363 1823 aa23.16■■□□□ 1.3
LIMS2-215ENST00000484252 IFIT1P09914 478 aaKnown RBP23.16■■□□□ 1.3
LIMS2-215ENST00000484252 LUZP1Q86V48 1076 aa23.16■■□□□ 1.3
LIMS2-215ENST00000484252 TDRD7Q8NHU6 1098 aaKnown RBP23.16■■□□□ 1.3
LIMS2-215ENST00000484252 KCPQ6ZWJ8 1503 aa23.16■■□□□ 1.3
LIMS2-215ENST00000484252 PAPPAQ13219 1627 aa23.16■■□□□ 1.3
LIMS2-215ENST00000484252 HSPD1P10809 573 aaKnown RBP23.15■■□□□ 1.3
LIMS2-215ENST00000484252 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.15■■□□□ 1.3
LIMS2-215ENST00000484252 ZNF274Q96GC6 653 aaPredicted RBP23.15■■□□□ 1.3
LIMS2-215ENST00000484252 LRRC2Q9BYS8 371 aa23.15■■□□□ 1.3
LIMS2-215ENST00000484252 KCNF1Q9H3M0 494 aa23.15■■□□□ 1.3
LIMS2-215ENST00000484252 FBXO3Q9UK99 471 aa23.15■■□□□ 1.3
LIMS2-215ENST00000484252 WDR17Q8IZU2 1322 aa23.15■■□□□ 1.3
LIMS2-215ENST00000484252 E7EWF7 191 aa23.15■■□□□ 1.3
LIMS2-215ENST00000484252 CTAGE5O15320 804 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms