RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 SLFNL1Q499Z3 407 aa8.57□□□□□ -1.04
SEMA3D-204ENST00000484038 ZNF787Q6DD87 383 aa8.57□□□□□ -1.04
SEMA3D-204ENST00000484038 ARXQ96QS3 562 aa8.57□□□□□ -1.04
SEMA3D-204ENST00000484038 CYLDQ9NQC7 956 aa8.57□□□□□ -1.04
SEMA3D-204ENST00000484038 GMPR2Q9P2T1 348 aaKnown RBP8.57□□□□□ -1.04
SEMA3D-204ENST00000484038 BTAF1O14981 1849 aa8.57□□□□□ -1.04
SEMA3D-204ENST00000484038 TTC21AQ8NDW8 1320 aa8.57□□□□□ -1.04
SEMA3D-204ENST00000484038 C1QTNF8P60827 252 aa8.56□□□□□ -1.04
SEMA3D-204ENST00000484038 CBLBQ13191 982 aa8.56□□□□□ -1.04
SEMA3D-204ENST00000484038 SCARF1Q14162 830 aa8.56□□□□□ -1.04
SEMA3D-204ENST00000484038 C6orf118Q5T5N4 469 aa8.56□□□□□ -1.04
SEMA3D-204ENST00000484038 MRPL14Q6P1L8 145 aaKnown RBP8.56□□□□□ -1.04
SEMA3D-204ENST00000484038 CEP126Q9P2H0 1117 aa8.56□□□□□ -1.04
SEMA3D-204ENST00000484038 PCDHB11Q9Y5F2 797 aa8.56□□□□□ -1.04
SEMA3D-204ENST00000484038 KTN1Q86UP2 1357 aaKnown RBP8.56□□□□□ -1.04
SEMA3D-204ENST00000484038 SOX11P35716 441 aa8.55□□□□□ -1.04
SEMA3D-204ENST00000484038 GPR162Q16538 588 aa8.55□□□□□ -1.04
SEMA3D-204ENST00000484038 PURBQ96QR8 312 aaKnown RBP8.55□□□□□ -1.04
SEMA3D-204ENST00000484038 NLRP2Q9NX02 1062 aa8.55□□□□□ -1.04
SEMA3D-204ENST00000484038 MON2Q7Z3U7 1717 aa8.55□□□□□ -1.04
SEMA3D-204ENST00000484038 LTN1O94822 1766 aa8.55□□□□□ -1.04
SEMA3D-204ENST00000484038 GOLGB1Q14789 3259 aaKnown RBP8.55□□□□□ -1.04
SEMA3D-204ENST00000484038 BMP2P12643 396 aa8.54□□□□□ -1.04
SEMA3D-204ENST00000484038 IL2RBP14784 551 aa8.54□□□□□ -1.04
SEMA3D-204ENST00000484038 ZNF827Q17R98 1081 aa8.54□□□□□ -1.04
SEMA3D-204ENST00000484038 TRIM46Q7Z4K8 759 aa8.54□□□□□ -1.04
SEMA3D-204ENST00000484038 RNF135Q8IUD6 432 aa8.54□□□□□ -1.04
SEMA3D-204ENST00000484038 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.54□□□□□ -1.04
SEMA3D-204ENST00000484038 MEIOBQ8N635 442 aa8.54□□□□□ -1.04
SEMA3D-204ENST00000484038 ROCK2O75116 1388 aaKnown RBP8.54□□□□□ -1.04
SEMA3D-204ENST00000484038 MAP3K5Q99683 1374 aa8.54□□□□□ -1.04
SEMA3D-204ENST00000484038 POM121CA8CG34 1229 aa8.54□□□□□ -1.04
SEMA3D-204ENST00000484038 LINC00528Q8N1L1 170 aa8.54□□□□□ -1.04
SEMA3D-204ENST00000484038 SENP2Q9HC62 589 aa8.54□□□□□ -1.04
SEMA3D-204ENST00000484038 POTECB2RU33 542 aa8.53□□□□□ -1.04
SEMA3D-204ENST00000484038 ANKRD24Q8TF21 1146 aa8.53□□□□□ -1.04
SEMA3D-204ENST00000484038 L3MBTL2Q969R5 705 aa8.53□□□□□ -1.04
SEMA3D-204ENST00000484038 LRRC4BQ9NT99 713 aa8.53□□□□□ -1.04
SEMA3D-204ENST00000484038 USP54Q70EL1 1684 aa8.52□□□□□ -1.05
SEMA3D-204ENST00000484038 POLD1P28340 1107 aa8.52□□□□□ -1.05
SEMA3D-204ENST00000484038 RELBQ01201 579 aa8.52□□□□□ -1.05
SEMA3D-204ENST00000484038 NME9Q86XW9 330 aa8.52□□□□□ -1.05
SEMA3D-204ENST00000484038 ZFP42Q96MM3 310 aa8.52□□□□□ -1.05
SEMA3D-204ENST00000484038 DOLKQ9UPQ8 538 aa8.52□□□□□ -1.05
SEMA3D-204ENST00000484038 QSER1Q2KHR3 1735 aa8.52□□□□□ -1.05
SEMA3D-204ENST00000484038 KCNQ4P56696 695 aa8.51□□□□□ -1.05
SEMA3D-204ENST00000484038 DDX54Q8TDD1 881 aaKnown RBP8.51□□□□□ -1.05
SEMA3D-204ENST00000484038 KIFC2Q96AC6 838 aa8.51□□□□□ -1.05
SEMA3D-204ENST00000484038 SYTL4Q96C24 671 aaPredicted RBP8.51□□□□□ -1.05
SEMA3D-204ENST00000484038 AGBL1Q96MI9 1066 aa8.51□□□□□ -1.05
SEMA3D-204ENST00000484038 TSEN34Q9BSV6 310 aaKnown RBP8.51□□□□□ -1.05
SEMA3D-204ENST00000484038 CEP350Q5VT06 3117 aa8.51□□□□□ -1.05
SEMA3D-204ENST00000484038 TUBGCP6Q96RT7 1819 aa8.51□□□□□ -1.05
SEMA3D-204ENST00000484038 DOT1LQ8TEK3 1739 aa8.51□□□□□ -1.05
SEMA3D-204ENST00000484038 USP31Q70CQ4 1352 aa8.5□□□□□ -1.05
SEMA3D-204ENST00000484038 OXLD1Q5BKU9 147 aa8.5□□□□□ -1.05
SEMA3D-204ENST00000484038 SLC27A3Q5K4L6 730 aa8.5□□□□□ -1.05
SEMA3D-204ENST00000484038 CC2D2BQ6DHV5 1058 aa8.5□□□□□ -1.05
SEMA3D-204ENST00000484038 TMC1Q8TDI8 760 aa8.5□□□□□ -1.05
SEMA3D-204ENST00000484038 TFCP2L1Q9NZI6 479 aa8.5□□□□□ -1.05
SEMA3D-204ENST00000484038 KAT6BQ8WYB5 2073 aa8.5□□□□□ -1.05
SEMA3D-204ENST00000484038 SHANK3Q9BYB0 1731 aa8.5□□□□□ -1.05
SEMA3D-204ENST00000484038 SBNO2Q9Y2G9 1366 aa8.5□□□□□ -1.05
SEMA3D-204ENST00000484038 FAM208AQ9UK61 1670 aaKnown RBP8.5□□□□□ -1.05
SEMA3D-204ENST00000484038 PNPLA7Q6ZV29 1317 aa8.5□□□□□ -1.05
SEMA3D-204ENST00000484038 A6NJR5 290 aa8.49□□□□□ -1.05
SEMA3D-204ENST00000484038 MYCP01106 439 aaPredicted RBP8.49□□□□□ -1.05
SEMA3D-204ENST00000484038 ADH1AP07327 375 aa8.49□□□□□ -1.05
SEMA3D-204ENST00000484038 Q6ZVU0 165 aa8.49□□□□□ -1.05
SEMA3D-204ENST00000484038 NLGN2Q8NFZ4 835 aa8.49□□□□□ -1.05
SEMA3D-204ENST00000484038 SLC16A10Q8TF71 515 aa8.49□□□□□ -1.05
SEMA3D-204ENST00000484038 LTV1Q96GA3 475 aaPredicted RBP8.49□□□□□ -1.05
SEMA3D-204ENST00000484038 TRIM47Q96LD4 638 aa8.49□□□□□ -1.05
SEMA3D-204ENST00000484038 CCDC85AQ96PX6 553 aaPredicted RBP8.49□□□□□ -1.05
SEMA3D-204ENST00000484038 CD163L1Q9NR16 1453 aa8.49□□□□□ -1.05
SEMA3D-204ENST00000484038 COL24A1Q17RW2 1714 aa8.49□□□□□ -1.05
SEMA3D-204ENST00000484038 LILRA1O75019 489 aa8.49□□□□□ -1.05
SEMA3D-204ENST00000484038 ADD1P35611 737 aaKnown RBP8.49□□□□□ -1.05
SEMA3D-204ENST00000484038 SCTRP47872 440 aa8.49□□□□□ -1.05
SEMA3D-204ENST00000484038 NEUROD1Q13562 356 aa8.49□□□□□ -1.05
SEMA3D-204ENST00000484038 HDGFL2Q7Z4V5 671 aaPredicted RBP8.49□□□□□ -1.05
SEMA3D-204ENST00000484038 ZNF395Q9H8N7 513 aaPredicted RBP8.49□□□□□ -1.05
SEMA3D-204ENST00000484038 EDC4Q6P2E9 1401 aaKnown RBP8.48□□□□□ -1.05
SEMA3D-204ENST00000484038 LY75O60449 1722 aa8.48□□□□□ -1.05
SEMA3D-204ENST00000484038 SNRPBP14678 240 aaKnown RBP8.48□□□□□ -1.05
SEMA3D-204ENST00000484038 ERVK-9P63128 1117 aa8.48□□□□□ -1.05
SEMA3D-204ENST00000484038 HDGFL1Q5TGJ6 251 aa8.48□□□□□ -1.05
SEMA3D-204ENST00000484038 SIN3AQ96ST3 1273 aa8.48□□□□□ -1.05
SEMA3D-204ENST00000484038 ALG2Q9H553 416 aa8.48□□□□□ -1.05
SEMA3D-204ENST00000484038 ANKRD36BQ8N2N9 1353 aa8.47□□□□□ -1.05
SEMA3D-204ENST00000484038 ATP5J2-PTCD1G3V325 749 aa8.47□□□□□ -1.05
SEMA3D-204ENST00000484038 PIK3CDO00329 1044 aa8.47□□□□□ -1.05
SEMA3D-204ENST00000484038 SKIP12755 728 aa8.47□□□□□ -1.05
SEMA3D-204ENST00000484038 YBX3P16989 372 aaKnown RBP eCLIP8.47□□□□□ -1.05
SEMA3D-204ENST00000484038 PLPP7Q8NBV4 271 aa8.47□□□□□ -1.05
SEMA3D-204ENST00000484038 GLMNQ92990 594 aa8.47□□□□□ -1.05
SEMA3D-204ENST00000484038 SLC12A5Q9H2X9 1139 aa8.47□□□□□ -1.05
SEMA3D-204ENST00000484038 POLMQ9NP87 494 aaPredicted RBP8.47□□□□□ -1.05
SEMA3D-204ENST00000484038 A0A1W2PP64 1363 aa8.47□□□□□ -1.05
SEMA3D-204ENST00000484038 TSGA10IPQ3SY00 556 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms