RNA–Protein interactions for RNA: ENST00000483981.2

SHANK1-208, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 422 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-208ENST00000483981 DDNO94850 711 aaPredicted RBP15.47■□□□□ 0.07
SHANK1-208ENST00000483981 XDHP47989 1333 aa15.46■□□□□ 0.07
SHANK1-208ENST00000483981 IGHMBP2P38935 993 aaKnown RBP15.46■□□□□ 0.07
SHANK1-208ENST00000483981 WASHC4Q2M389 1173 aa15.46■□□□□ 0.07
SHANK1-208ENST00000483981 DPY19L2Q6NUT2 758 aa15.46■□□□□ 0.07
SHANK1-208ENST00000483981 JDP2Q8WYK2 163 aa15.46■□□□□ 0.07
SHANK1-208ENST00000483981 CLUAP1Q96AJ1 413 aa15.46■□□□□ 0.07
SHANK1-208ENST00000483981 ZNF594Q96JF6 807 aaPredicted RBP15.46■□□□□ 0.07
SHANK1-208ENST00000483981 GPR101Q96P66 508 aaPredicted RBP15.46■□□□□ 0.07
SHANK1-208ENST00000483981 MEIS3Q99687 375 aa15.46■□□□□ 0.07
SHANK1-208ENST00000483981 RRAGCQ9HB90 399 aa15.46■□□□□ 0.07
SHANK1-208ENST00000483981 A0A1B0GUL6 1792 aa15.45■□□□□ 0.06
SHANK1-208ENST00000483981 YDJCA8MPS7 323 aa15.45■□□□□ 0.06
SHANK1-208ENST00000483981 RLBP1P12271 317 aa15.45■□□□□ 0.06
SHANK1-208ENST00000483981 CCDC57Q2TAC2 916 aa15.45■□□□□ 0.06
SHANK1-208ENST00000483981 TMEM57Q8N5G2 664 aa15.45■□□□□ 0.06
SHANK1-208ENST00000483981 L3MBTL3Q96JM7 780 aaPredicted RBP15.45■□□□□ 0.06
SHANK1-208ENST00000483981 ZNRF3Q9ULT6 936 aa15.45■□□□□ 0.06
SHANK1-208ENST00000483981 C6orf229H3BNL8 230 aa15.44■□□□□ 0.06
SHANK1-208ENST00000483981 UFL1O94874 794 aa15.44■□□□□ 0.06
SHANK1-208ENST00000483981 UBTFL1P0CB47 393 aaPredicted RBP15.44■□□□□ 0.06
SHANK1-208ENST00000483981 ATP2B4P23634 1241 aa15.44■□□□□ 0.06
SHANK1-208ENST00000483981 RFX5P48382 616 aaPredicted RBP15.44■□□□□ 0.06
SHANK1-208ENST00000483981 NIM1KQ8IY84 436 aa15.44■□□□□ 0.06
SHANK1-208ENST00000483981 MPHOSPH8Q99549 860 aa15.44■□□□□ 0.06
SHANK1-208ENST00000483981 ANKIB1Q9P2G1 1089 aa15.44■□□□□ 0.06
SHANK1-208ENST00000483981 GGA1Q9UJY5 639 aa15.44■□□□□ 0.06
SHANK1-208ENST00000483981 RCAN3Q9UKA8 241 aa15.44■□□□□ 0.06
SHANK1-208ENST00000483981 CHMP3Q9Y3E7 222 aa15.44■□□□□ 0.06
SHANK1-208ENST00000483981 IRS2Q9Y4H2 1338 aa15.43■□□□□ 0.06
SHANK1-208ENST00000483981 RIMBP2O15034 1052 aa15.43■□□□□ 0.06
SHANK1-208ENST00000483981 CHRNDQ07001 517 aa15.43■□□□□ 0.06
SHANK1-208ENST00000483981 CXCL9Q07325 125 aa15.43■□□□□ 0.06
SHANK1-208ENST00000483981 GPC2Q8N158 579 aa15.43■□□□□ 0.06
SHANK1-208ENST00000483981 EYA3Q99504 573 aa15.43■□□□□ 0.06
SHANK1-208ENST00000483981 PUS3Q9BZE2 481 aaKnown RBP15.43■□□□□ 0.06
SHANK1-208ENST00000483981 ANKRD2Q9GZV1 360 aa15.43■□□□□ 0.06
SHANK1-208ENST00000483981 RIPOR2Q9Y4F9 1068 aa15.43■□□□□ 0.06
SHANK1-208ENST00000483981 VEGFAP15692 232 aaPredicted RBP15.42■□□□□ 0.06
SHANK1-208ENST00000483981 LDHAL6AQ6ZMR3 332 aa15.42■□□□□ 0.06
SHANK1-208ENST00000483981 TXNRD3Q86VQ6 643 aa15.42■□□□□ 0.06
SHANK1-208ENST00000483981 DZIP1LQ8IYY4 767 aaKnown RBP15.42■□□□□ 0.06
SHANK1-208ENST00000483981 LEMD3Q9Y2U8 911 aa15.42■□□□□ 0.06
SHANK1-208ENST00000483981 LRRFIP2Q9Y608 721 aaKnown RBP15.42■□□□□ 0.06
SHANK1-208ENST00000483981 MED23Q9ULK4 1368 aa15.41■□□□□ 0.06
SHANK1-208ENST00000483981 EIF6P56537 245 aaKnown RBP15.41■□□□□ 0.06
SHANK1-208ENST00000483981 PTPN12Q05209 780 aaKnown RBP15.41■□□□□ 0.06
SHANK1-208ENST00000483981 ZC3H12CQ9C0D7 883 aaKnown RBP15.41■□□□□ 0.06
SHANK1-208ENST00000483981 DBNDD1Q9H9R9 158 aa15.41■□□□□ 0.06
SHANK1-208ENST00000483981 KCNQ5Q9NR82 932 aa15.41■□□□□ 0.06
SHANK1-208ENST00000483981 ZNF804BA4D1E1 1349 aa15.41■□□□□ 0.06
SHANK1-208ENST00000483981 SCN4AP35499 1836 aa15.4■□□□□ 0.06
SHANK1-208ENST00000483981 SCN9AQ15858 1988 aa15.4■□□□□ 0.06
SHANK1-208ENST00000483981 SNAP23O00161 211 aa15.4■□□□□ 0.06
SHANK1-208ENST00000483981 ZBTB7BO15156 539 aaPredicted RBP15.4■□□□□ 0.06
SHANK1-208ENST00000483981 TAF5LO75529 589 aa15.4■□□□□ 0.06
SHANK1-208ENST00000483981 GNAI3P08754 354 aa15.4■□□□□ 0.06
SHANK1-208ENST00000483981 KLRK1P26718 216 aa15.4■□□□□ 0.06
SHANK1-208ENST00000483981 SCNN1DP51172 638 aa15.4■□□□□ 0.06
SHANK1-208ENST00000483981 MTX1Q13505 466 aa15.4■□□□□ 0.06
SHANK1-208ENST00000483981 DOK7Q18PE1 504 aa15.4■□□□□ 0.06
SHANK1-208ENST00000483981 LRRC24Q50LG9 513 aa15.4■□□□□ 0.06
SHANK1-208ENST00000483981 HELBQ8NG08 1087 aaPredicted RBP15.4■□□□□ 0.06
SHANK1-208ENST00000483981 KLHDC4Q8TBB5 520 aa15.4■□□□□ 0.06
SHANK1-208ENST00000483981 ECE2O60344 883 aa15.39■□□□□ 0.05
SHANK1-208ENST00000483981 TOMM70O94826 608 aa15.39■□□□□ 0.05
SHANK1-208ENST00000483981 C1QTNF8P60827 252 aa15.39■□□□□ 0.05
SHANK1-208ENST00000483981 C15orf52Q6ZUT6 534 aaKnown RBP15.39■□□□□ 0.05
SHANK1-208ENST00000483981 VGLL2Q8N8G2 317 aa15.39■□□□□ 0.05
SHANK1-208ENST00000483981 HDAC5Q9UQL6 1122 aa15.39■□□□□ 0.05
SHANK1-208ENST00000483981 RAD17O75943 681 aa15.38■□□□□ 0.05
SHANK1-208ENST00000483981 TAF7LQ5H9L4 462 aa15.38■□□□□ 0.05
SHANK1-208ENST00000483981 CIAPIN1Q6FI81 312 aa15.38■□□□□ 0.05
SHANK1-208ENST00000483981 PANK1Q8TE04 598 aa15.38■□□□□ 0.05
SHANK1-208ENST00000483981 YTHDC1Q96MU7 727 aaKnown RBP15.38■□□□□ 0.05
SHANK1-208ENST00000483981 TAF1DQ9H5J8 278 aaPredicted RBP15.38■□□□□ 0.05
SHANK1-208ENST00000483981 CNNM1Q9NRU3 951 aa15.38■□□□□ 0.05
SHANK1-208ENST00000483981 GJA3Q9Y6H8 435 aa15.38■□□□□ 0.05
SHANK1-208ENST00000483981 ZNF646O15015 1829 aaPredicted RBP15.38■□□□□ 0.05
SHANK1-208ENST00000483981 PLIN1O60240 522 aa15.37■□□□□ 0.05
SHANK1-208ENST00000483981 ATG9AQ7Z3C6 839 aa15.37■□□□□ 0.05
SHANK1-208ENST00000483981 FTSJ3Q8IY81 847 aaKnown RBP15.37■□□□□ 0.05
SHANK1-208ENST00000483981 RBM46Q8TBY0 533 aaKnown RBP15.37■□□□□ 0.05
SHANK1-208ENST00000483981 PSME4Q14997 1843 aa15.37■□□□□ 0.05
SHANK1-208ENST00000483981 MROH5Q6ZUA9 1318 aa15.37■□□□□ 0.05
SHANK1-208ENST00000483981 ADAMTSL1Q8N6G6 1762 aa15.36■□□□□ 0.05
SHANK1-208ENST00000483981 IQCA1LA6NCM1 817 aa15.36■□□□□ 0.05
SHANK1-208ENST00000483981 EYA2O00167 538 aa15.36■□□□□ 0.05
SHANK1-208ENST00000483981 PSMD14O00487 310 aa15.36■□□□□ 0.05
SHANK1-208ENST00000483981 GNAI2P04899 355 aa15.36■□□□□ 0.05
SHANK1-208ENST00000483981 VIL1P09327 827 aaKnown RBP15.36■□□□□ 0.05
SHANK1-208ENST00000483981 TNIP1Q15025 636 aa15.36■□□□□ 0.05
SHANK1-208ENST00000483981 PODNQ7Z5L7 613 aa15.36■□□□□ 0.05
SHANK1-208ENST00000483981 COPRSQ9NQ92 184 aa15.36■□□□□ 0.05
SHANK1-208ENST00000483981 GPRC5DQ9NZD1 345 aa15.36■□□□□ 0.05
SHANK1-208ENST00000483981 FBXO3Q9UK99 471 aa15.36■□□□□ 0.05
SHANK1-208ENST00000483981 ZNF609O15014 1411 aa15.35■□□□□ 0.05
SHANK1-208ENST00000483981 CIAO1O76071 339 aa15.35■□□□□ 0.05
SHANK1-208ENST00000483981 POTEIP0CG38 1075 aa15.35■□□□□ 0.05
SHANK1-208ENST00000483981 POTEJP0CG39 1038 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms