RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 ST5P78524 1137 aa17.22■□□□□ 0.35
SMAD9-204ENST00000483941 CNBD1Q8NA66 436 aa17.22■□□□□ 0.35
SMAD9-204ENST00000483941 TTLL11Q8NHH1 800 aa17.22■□□□□ 0.35
SMAD9-204ENST00000483941 NLRP3Q96P20 1036 aa17.22■□□□□ 0.35
SMAD9-204ENST00000483941 CREBZFQ9NS37 354 aa17.22■□□□□ 0.35
SMAD9-204ENST00000483941 EXOC6BQ9Y2D4 811 aa17.22■□□□□ 0.35
SMAD9-204ENST00000483941 H0YIN7 160 aa17.21■□□□□ 0.35
SMAD9-204ENST00000483941 CIAO1O76071 339 aa17.21■□□□□ 0.35
SMAD9-204ENST00000483941 SERPINB2P05120 415 aa17.21■□□□□ 0.35
SMAD9-204ENST00000483941 DPY19L2Q6NUT2 758 aa17.21■□□□□ 0.35
SMAD9-204ENST00000483941 MKRN1Q9UHC7 482 aaKnown RBP17.21■□□□□ 0.35
SMAD9-204ENST00000483941 RTL9Q8NET4 1388 aa17.2■□□□□ 0.34
SMAD9-204ENST00000483941 IL15P40933 162 aaPredicted RBP17.2■□□□□ 0.34
SMAD9-204ENST00000483941 PTPN12Q05209 780 aaKnown RBP17.2■□□□□ 0.34
SMAD9-204ENST00000483941 SF3B3Q15393 1217 aaKnown RBP17.2■□□□□ 0.34
SMAD9-204ENST00000483941 ERFEQ4G0M1 354 aa17.2■□□□□ 0.34
SMAD9-204ENST00000483941 CLASRPQ8N2M8 674 aaKnown RBP17.2■□□□□ 0.34
SMAD9-204ENST00000483941 RHPN1Q8TCX5 695 aa17.2■□□□□ 0.34
SMAD9-204ENST00000483941 LNPKQ9C0E8 428 aa17.2■□□□□ 0.34
SMAD9-204ENST00000483941 HCLS1P14317 486 aaPredicted RBP17.19■□□□□ 0.34
SMAD9-204ENST00000483941 RFX5P48382 616 aaPredicted RBP17.19■□□□□ 0.34
SMAD9-204ENST00000483941 CHADLQ6NUI6 762 aa17.19■□□□□ 0.34
SMAD9-204ENST00000483941 NUTM1Q86Y26 1132 aa17.19■□□□□ 0.34
SMAD9-204ENST00000483941 CDC5LQ99459 802 aaKnown RBP17.19■□□□□ 0.34
SMAD9-204ENST00000483941 CNTNAP1P78357 1384 aa17.18■□□□□ 0.34
SMAD9-204ENST00000483941 APBB1O00213 710 aa17.18■□□□□ 0.34
SMAD9-204ENST00000483941 ITGA6P23229 1130 aa17.18■□□□□ 0.34
SMAD9-204ENST00000483941 RGS3P49796 1198 aa17.18■□□□□ 0.34
SMAD9-204ENST00000483941 SCN4AP35499 1836 aa17.18■□□□□ 0.34
SMAD9-204ENST00000483941 EYA2O00167 538 aa17.17■□□□□ 0.34
SMAD9-204ENST00000483941 FOXN1O15353 648 aa17.17■□□□□ 0.34
SMAD9-204ENST00000483941 IGHMBP2P38935 993 aaKnown RBP17.17■□□□□ 0.34
SMAD9-204ENST00000483941 FAM161AQ3B820 660 aa17.17■□□□□ 0.34
SMAD9-204ENST00000483941 RIC1Q4ADV7 1423 aa17.17■□□□□ 0.34
SMAD9-204ENST00000483941 SYNE4Q8N205 404 aa17.17■□□□□ 0.34
SMAD9-204ENST00000483941 GPATCH3Q96I76 525 aa17.17■□□□□ 0.34
SMAD9-204ENST00000483941 MPHOSPH8Q99549 860 aa17.16■□□□□ 0.34
SMAD9-204ENST00000483941 GREM2Q9H772 168 aa17.16■□□□□ 0.34
SMAD9-204ENST00000483941 PRDM10Q9NQV6 1147 aa17.16■□□□□ 0.34
SMAD9-204ENST00000483941 PA2G4Q9UQ80 394 aaKnown RBP17.16■□□□□ 0.34
SMAD9-204ENST00000483941 SLX4Q8IY92 1834 aa17.15■□□□□ 0.34
SMAD9-204ENST00000483941 POTEIP0CG38 1075 aa17.15■□□□□ 0.34
SMAD9-204ENST00000483941 POTEJP0CG39 1038 aa17.15■□□□□ 0.34
SMAD9-204ENST00000483941 LDHAL6AQ6ZMR3 332 aa17.15■□□□□ 0.34
SMAD9-204ENST00000483941 ZNF622Q969S3 477 aaKnown RBP eCLIP17.15■□□□□ 0.34
SMAD9-204ENST00000483941 SIL1Q9H173 461 aa17.15■□□□□ 0.34
SMAD9-204ENST00000483941 GPR108Q9NPR9 543 aa17.15■□□□□ 0.34
SMAD9-204ENST00000483941 CEP126Q9P2H0 1117 aa17.15■□□□□ 0.34
SMAD9-204ENST00000483941 ZNF219Q9P2Y4 722 aaPredicted RBP17.15■□□□□ 0.34
SMAD9-204ENST00000483941 AKAP2Q9Y2D5 859 aa17.15■□□□□ 0.34
SMAD9-204ENST00000483941 LTBP3Q9NS15 1303 aa17.15■□□□□ 0.34
SMAD9-204ENST00000483941 C21orf2O43822 256 aa17.14■□□□□ 0.33
SMAD9-204ENST00000483941 IFIT2P09913 472 aaKnown RBP17.14■□□□□ 0.33
SMAD9-204ENST00000483941 PRR5LQ6MZQ0 368 aa17.14■□□□□ 0.33
SMAD9-204ENST00000483941 DDX46Q7L014 1031 aaKnown RBP17.14■□□□□ 0.33
SMAD9-204ENST00000483941 AIDAQ96BJ3 306 aa17.14■□□□□ 0.33
SMAD9-204ENST00000483941 TAOK3Q9H2K8 898 aa17.14■□□□□ 0.33
SMAD9-204ENST00000483941 CNNM1Q9NRU3 951 aa17.14■□□□□ 0.33
SMAD9-204ENST00000483941 EIF5BO60841 1220 aaKnown RBP17.13■□□□□ 0.33
SMAD9-204ENST00000483941 PDE6BP35913 854 aa17.13■□□□□ 0.33
SMAD9-204ENST00000483941 ANKRD18AQ8IVF6 992 aa17.13■□□□□ 0.33
SMAD9-204ENST00000483941 BRIP1Q9BX63 1249 aa17.13■□□□□ 0.33
SMAD9-204ENST00000483941 AOX1Q06278 1338 aa17.13■□□□□ 0.33
SMAD9-204ENST00000483941 MROH5Q6ZUA9 1318 aa17.13■□□□□ 0.33
SMAD9-204ENST00000483941 SMARCA5O60264 1052 aaPredicted RBP17.12■□□□□ 0.33
SMAD9-204ENST00000483941 SLC34A2O95436 690 aa17.12■□□□□ 0.33
SMAD9-204ENST00000483941 CTCFP49711 727 aaPredicted RBP17.12■□□□□ 0.33
SMAD9-204ENST00000483941 KLHDC4Q8TBB5 520 aa17.12■□□□□ 0.33
SMAD9-204ENST00000483941 RPGRQ92834 1020 aaKnown RBP17.12■□□□□ 0.33
SMAD9-204ENST00000483941 CCDC85AQ96PX6 553 aaPredicted RBP17.12■□□□□ 0.33
SMAD9-204ENST00000483941 OSBPL3Q9H4L5 887 aa17.12■□□□□ 0.33
SMAD9-204ENST00000483941 PASKQ96RG2 1323 aa17.12■□□□□ 0.33
SMAD9-204ENST00000483941 ERC2O15083 957 aa17.11■□□□□ 0.33
SMAD9-204ENST00000483941 DDNO94850 711 aaPredicted RBP17.11■□□□□ 0.33
SMAD9-204ENST00000483941 SASH1O94885 1247 aa17.11■□□□□ 0.33
SMAD9-204ENST00000483941 MX1P20591 662 aa17.11■□□□□ 0.33
SMAD9-204ENST00000483941 PDE4AP27815 886 aa17.11■□□□□ 0.33
SMAD9-204ENST00000483941 LDHDQ86WU2 507 aa17.11■□□□□ 0.33
SMAD9-204ENST00000483941 PLEKHM2Q8IWE5 1019 aa17.11■□□□□ 0.33
SMAD9-204ENST00000483941 RBM17Q96I25 401 aaKnown RBP17.11■□□□□ 0.33
SMAD9-204ENST00000483941 IL1RAPL2Q9NP60 686 aa17.11■□□□□ 0.33
SMAD9-204ENST00000483941 STAP2Q9UGK3 403 aa17.11■□□□□ 0.33
SMAD9-204ENST00000483941 TTC41PQ6P2S7 1318 aa17.11■□□□□ 0.33
SMAD9-204ENST00000483941 MYH3P11055 1940 aa17.11■□□□□ 0.33
SMAD9-204ENST00000483941 ABCC12Q96J65 1359 aa17.11■□□□□ 0.33
SMAD9-204ENST00000483941 LAMB2P55268 1798 aa17.1■□□□□ 0.33
SMAD9-204ENST00000483941 ADAMTSL1Q8N6G6 1762 aa17.1■□□□□ 0.33
SMAD9-204ENST00000483941 IQCA1LA6NCM1 817 aa17.1■□□□□ 0.33
SMAD9-204ENST00000483941 METTL24Q5JXM2 366 aa17.1■□□□□ 0.33
SMAD9-204ENST00000483941 ATG9AQ7Z3C6 839 aa17.1■□□□□ 0.33
SMAD9-204ENST00000483941 AACSQ86V21 672 aa17.1■□□□□ 0.33
SMAD9-204ENST00000483941 ZNF594Q96JF6 807 aaPredicted RBP17.1■□□□□ 0.33
SMAD9-204ENST00000483941 BSDC1Q9NW68 430 aaPredicted RBP17.1■□□□□ 0.33
SMAD9-204ENST00000483941 RIPOR2Q9Y4F9 1068 aa17.1■□□□□ 0.33
SMAD9-204ENST00000483941 KLRG2A4D1S0 409 aaPredicted RBP17.09■□□□□ 0.33
SMAD9-204ENST00000483941 RPS8P62241 208 aaKnown RBP17.09■□□□□ 0.33
SMAD9-204ENST00000483941 TFCP2Q12800 502 aa17.09■□□□□ 0.33
SMAD9-204ENST00000483941 CRY2Q49AN0 593 aa17.09■□□□□ 0.33
SMAD9-204ENST00000483941 BMP2KLQ5H9B9 411 aa17.09■□□□□ 0.33
SMAD9-204ENST00000483941 TMC4Q7Z404 712 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms