RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 SCN9AQ15858 1988 aa16.89■□□□□ 0.29
UBR4-213ENST00000483922 WTIPA6NIX2 430 aaPredicted RBP16.88■□□□□ 0.29
UBR4-213ENST00000483922 ZNF157P51786 506 aaPredicted RBP16.88■□□□□ 0.29
UBR4-213ENST00000483922 NEUROD2Q15784 382 aa16.88■□□□□ 0.29
UBR4-213ENST00000483922 CCDC146Q8IYE0 955 aa16.88■□□□□ 0.29
UBR4-213ENST00000483922 C2orf69Q8N8R5 385 aa16.88■□□□□ 0.29
UBR4-213ENST00000483922 RPS12P25398 132 aaKnown RBP16.87■□□□□ 0.29
UBR4-213ENST00000483922 RPS8P62241 208 aaKnown RBP16.87■□□□□ 0.29
UBR4-213ENST00000483922 CCDC102AQ96A19 550 aa16.87■□□□□ 0.29
UBR4-213ENST00000483922 DCPSQ96C86 337 aaKnown RBP16.87■□□□□ 0.29
UBR4-213ENST00000483922 SAGE1Q9NXZ1 904 aa16.87■□□□□ 0.29
UBR4-213ENST00000483922 IRS4O14654 1257 aaPredicted RBP16.86■□□□□ 0.29
UBR4-213ENST00000483922 SLC10A3P09131 477 aa16.86■□□□□ 0.29
UBR4-213ENST00000483922 SOX10P56693 466 aa16.86■□□□□ 0.29
UBR4-213ENST00000483922 TRIM28Q13263 835 aaKnown RBP16.86■□□□□ 0.29
UBR4-213ENST00000483922 KIF4BQ2VIQ3 1234 aa16.86■□□□□ 0.29
UBR4-213ENST00000483922 PODXL2Q9NZ53 605 aa16.86■□□□□ 0.29
UBR4-213ENST00000483922 SCAF8Q9UPN6 1271 aaKnown RBP16.86■□□□□ 0.29
UBR4-213ENST00000483922 LAS1LQ9Y4W2 734 aaKnown RBP16.86■□□□□ 0.29
UBR4-213ENST00000483922 HDGFL1Q5TGJ6 251 aa16.85■□□□□ 0.29
UBR4-213ENST00000483922 JARID2Q92833 1246 aaPredicted RBP16.85■□□□□ 0.29
UBR4-213ENST00000483922 CDCA5Q96FF9 252 aa16.85■□□□□ 0.29
UBR4-213ENST00000483922 GMLQ99445 158 aa16.85■□□□□ 0.29
UBR4-213ENST00000483922 GGA3Q9NZ52 723 aa16.85■□□□□ 0.29
UBR4-213ENST00000483922 ZNF280AP59817 542 aaPredicted RBP16.84■□□□□ 0.29
UBR4-213ENST00000483922 SCARF1Q14162 830 aa16.84■□□□□ 0.29
UBR4-213ENST00000483922 MOB2Q70IA6 237 aa16.84■□□□□ 0.29
UBR4-213ENST00000483922 DBF4Q9UBU7 674 aaPredicted RBP16.84■□□□□ 0.29
UBR4-213ENST00000483922 LMOD3Q0VAK6 560 aa16.83■□□□□ 0.28
UBR4-213ENST00000483922 ANGEL2Q5VTE6 544 aaKnown RBP16.83■□□□□ 0.28
UBR4-213ENST00000483922 RASAL3Q86YV0 1011 aa16.83■□□□□ 0.28
UBR4-213ENST00000483922 EYA3Q99504 573 aa16.83■□□□□ 0.28
UBR4-213ENST00000483922 ZC3H12CQ9C0D7 883 aaKnown RBP16.83■□□□□ 0.28
UBR4-213ENST00000483922 PHAXQ9H814 394 aaKnown RBP16.83■□□□□ 0.28
UBR4-213ENST00000483922 DUSP27Q5VZP5 1158 aa16.82■□□□□ 0.28
UBR4-213ENST00000483922 RSBN1LQ6PCB5 846 aaPredicted RBP16.82■□□□□ 0.28
UBR4-213ENST00000483922 HOXB7P09629 217 aa16.81■□□□□ 0.28
UBR4-213ENST00000483922 PRAMEF18Q5VWM3 479 aa16.81■□□□□ 0.28
UBR4-213ENST00000483922 SULF1Q8IWU6 871 aa16.81■□□□□ 0.28
UBR4-213ENST00000483922 ZBTB38Q8NAP3 1195 aaPredicted RBP16.81■□□□□ 0.28
UBR4-213ENST00000483922 UFL1O94874 794 aa16.8■□□□□ 0.28
UBR4-213ENST00000483922 CCDC85AQ96PX6 553 aaPredicted RBP16.8■□□□□ 0.28
UBR4-213ENST00000483922 MXD3Q9BW11 206 aa16.8■□□□□ 0.28
UBR4-213ENST00000483922 HYPKQ9NX55 129 aa16.8■□□□□ 0.28
UBR4-213ENST00000483922 ZNF609O15014 1411 aa16.79■□□□□ 0.28
UBR4-213ENST00000483922 ZNF853P0CG23 659 aa16.79■□□□□ 0.28
UBR4-213ENST00000483922 RUNDC1Q96C34 613 aa16.79■□□□□ 0.28
UBR4-213ENST00000483922 MBIPQ9NS73 344 aa16.79■□□□□ 0.28
UBR4-213ENST00000483922 PCDH10Q9P2E7 1040 aa16.79■□□□□ 0.28
UBR4-213ENST00000483922 GGA1Q9UJY5 639 aa16.79■□□□□ 0.28
UBR4-213ENST00000483922 ADAMTS8Q9UP79 889 aa16.79■□□□□ 0.28
UBR4-213ENST00000483922 PDE4DIPQ5VU43 2346 aa16.79■□□□□ 0.28
UBR4-213ENST00000483922 UBE2Q2LH0YL09 131 aa16.78■□□□□ 0.28
UBR4-213ENST00000483922 RALBP1Q15311 655 aa16.78■□□□□ 0.28
UBR4-213ENST00000483922 NBPF9Q3BBW0 867 aa16.78■□□□□ 0.28
UBR4-213ENST00000483922 CTU1Q7Z7A3 348 aaKnown RBP16.78■□□□□ 0.28
UBR4-213ENST00000483922 AGBL3Q8NEM8 1001 aa16.78■□□□□ 0.28
UBR4-213ENST00000483922 MYD88Q99836 296 aa16.78■□□□□ 0.28
UBR4-213ENST00000483922 MYOZ2Q9NPC6 264 aa16.78■□□□□ 0.28
UBR4-213ENST00000483922 ANKIB1Q9P2G1 1089 aa16.78■□□□□ 0.28
UBR4-213ENST00000483922 AKAP11Q9UKA4 1901 aa16.77■□□□□ 0.28
UBR4-213ENST00000483922 TBC1D8O95759 1140 aa16.77■□□□□ 0.28
UBR4-213ENST00000483922 RIC3Q7Z5B4 369 aa16.77■□□□□ 0.28
UBR4-213ENST00000483922 HPS5Q9UPZ3 1129 aa16.77■□□□□ 0.28
UBR4-213ENST00000483922 ELL2O00472 640 aaPredicted RBP16.76■□□□□ 0.27
UBR4-213ENST00000483922 PCCAP05165 728 aaPredicted RBP16.76■□□□□ 0.27
UBR4-213ENST00000483922 USP17L8P0C7I0 530 aa16.76■□□□□ 0.27
UBR4-213ENST00000483922 ZNF296Q8WUU4 475 aaPredicted RBP16.76■□□□□ 0.27
UBR4-213ENST00000483922 R3HDMLQ9H3Y0 253 aa16.76■□□□□ 0.27
UBR4-213ENST00000483922 PSME4Q14997 1843 aa16.75■□□□□ 0.27
UBR4-213ENST00000483922 PDE8AO60658 829 aa16.75■□□□□ 0.27
UBR4-213ENST00000483922 C8orf58Q8NAV2 365 aa16.75■□□□□ 0.27
UBR4-213ENST00000483922 CCDC191Q8NCU4 936 aa16.75■□□□□ 0.27
UBR4-213ENST00000483922 ZNF646O15015 1829 aaPredicted RBP16.75■□□□□ 0.27
UBR4-213ENST00000483922 PITPNM2Q9BZ72 1349 aa16.74■□□□□ 0.27
UBR4-213ENST00000483922 USP17L3A6NCW0 530 aa16.74■□□□□ 0.27
UBR4-213ENST00000483922 USP17L4A6NCW7 530 aa16.74■□□□□ 0.27
UBR4-213ENST00000483922 G3V3G9 751 aa16.74■□□□□ 0.27
UBR4-213ENST00000483922 TM4SF4P48230 202 aa16.74■□□□□ 0.27
UBR4-213ENST00000483922 FKBP1BP68106 108 aa16.74■□□□□ 0.27
UBR4-213ENST00000483922 DACT2Q5SW24 774 aa16.74■□□□□ 0.27
UBR4-213ENST00000483922 DCAF8Q5TAQ9 597 aa16.74■□□□□ 0.27
UBR4-213ENST00000483922 USP17L1Q7RTZ2 530 aa16.74■□□□□ 0.27
UBR4-213ENST00000483922 PODNQ7Z5L7 613 aa16.74■□□□□ 0.27
UBR4-213ENST00000483922 TXNRD3Q86VQ6 643 aa16.74■□□□□ 0.27
UBR4-213ENST00000483922 XDHP47989 1333 aa16.73■□□□□ 0.27
UBR4-213ENST00000483922 IGKV5-2P06315 115 aa16.73■□□□□ 0.27
UBR4-213ENST00000483922 CCDC152Q4G0S7 254 aa16.73■□□□□ 0.27
UBR4-213ENST00000483922 REM2Q8IYK8 340 aaPredicted RBP16.73■□□□□ 0.27
UBR4-213ENST00000483922 METTL22Q9BUU2 404 aaPredicted RBP16.73■□□□□ 0.27
UBR4-213ENST00000483922 MINPP1Q9UNW1 487 aa16.73■□□□□ 0.27
UBR4-213ENST00000483922 PAPPA2Q9BXP8 1791 aa16.73■□□□□ 0.27
UBR4-213ENST00000483922 HTTP42858 3142 aa16.73■□□□□ 0.27
UBR4-213ENST00000483922 WNT10BO00744 389 aa16.72■□□□□ 0.27
UBR4-213ENST00000483922 ATP2B4P23634 1241 aa16.72■□□□□ 0.27
UBR4-213ENST00000483922 GOLGA2Q08379 1002 aa16.72■□□□□ 0.27
UBR4-213ENST00000483922 TTLL11Q8NHH1 800 aa16.72■□□□□ 0.27
UBR4-213ENST00000483922 CWC25Q9NXE8 425 aaPredicted RBP16.72■□□□□ 0.27
UBR4-213ENST00000483922 MKI67P46013 3256 aaKnown RBP16.72■□□□□ 0.27
UBR4-213ENST00000483922 MYBBP1AQ9BQG0 1328 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms