RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 MYD88Q99836 296 aa14.73□□□□□ -0.05
LINC00477-201ENST00000483544 STRCP1A6NGW2 1772 aa14.73□□□□□ -0.05
LINC00477-201ENST00000483544 SLFN14P0C7P3 912 aa14.72□□□□□ -0.05
LINC00477-201ENST00000483544 CSB-PGBD3P0DP91 1061 aa14.72□□□□□ -0.05
LINC00477-201ENST00000483544 NMIQ13287 307 aaPredicted RBP14.72□□□□□ -0.05
LINC00477-201ENST00000483544 USPL1Q5W0Q7 1092 aa14.72□□□□□ -0.05
LINC00477-201ENST00000483544 TMED8Q6PL24 325 aaPredicted RBP14.72□□□□□ -0.05
LINC00477-201ENST00000483544 FSD1Q9BTV5 496 aa14.72□□□□□ -0.05
LINC00477-201ENST00000483544 GPR108Q9NPR9 543 aa14.72□□□□□ -0.05
LINC00477-201ENST00000483544 CEP83Q9Y592 693 aa14.72□□□□□ -0.05
LINC00477-201ENST00000483544 SPATA31A3Q5VYP0 1347 aa14.72□□□□□ -0.05
LINC00477-201ENST00000483544 GLI3P10071 1580 aa14.72□□□□□ -0.05
LINC00477-201ENST00000483544 SLC27A2O14975 620 aa14.72□□□□□ -0.05
LINC00477-201ENST00000483544 RFX5P48382 616 aaPredicted RBP14.72□□□□□ -0.05
LINC00477-201ENST00000483544 SLC39A6Q13433 755 aa14.72□□□□□ -0.05
LINC00477-201ENST00000483544 RAI14Q9P0K7 980 aa14.72□□□□□ -0.05
LINC00477-201ENST00000483544 PAPPAQ13219 1627 aa14.71□□□□□ -0.05
LINC00477-201ENST00000483544 NUP188Q5SRE5 1749 aa14.71□□□□□ -0.05
LINC00477-201ENST00000483544 CABP4P57796 275 aa14.71□□□□□ -0.05
LINC00477-201ENST00000483544 FOXD4L5Q5VV16 416 aaPredicted RBP14.71□□□□□ -0.05
LINC00477-201ENST00000483544 BLOC1S2Q6QNY1 142 aa14.71□□□□□ -0.05
LINC00477-201ENST00000483544 FOXD4L4Q8WXT5 416 aaPredicted RBP14.71□□□□□ -0.05
LINC00477-201ENST00000483544 ANKRD7Q92527 254 aa14.71□□□□□ -0.05
LINC00477-201ENST00000483544 CCDC8Q9H0W5 538 aaPredicted RBP14.71□□□□□ -0.05
LINC00477-201ENST00000483544 ERVV-2B6SEH9 535 aa14.7□□□□□ -0.06
LINC00477-201ENST00000483544 MYL6BP14649 208 aa14.7□□□□□ -0.06
LINC00477-201ENST00000483544 GJB2P29033 226 aa14.7□□□□□ -0.06
LINC00477-201ENST00000483544 TNNI3KQ59H18 835 aa14.7□□□□□ -0.06
LINC00477-201ENST00000483544 CHMP4CQ96CF2 233 aa14.7□□□□□ -0.06
LINC00477-201ENST00000483544 FEZ2Q9UHY8 353 aaPredicted RBP14.7□□□□□ -0.06
LINC00477-201ENST00000483544 NSFL1CQ9UNZ2 370 aaKnown RBP14.7□□□□□ -0.06
LINC00477-201ENST00000483544 U3KPZ7 1027 aaPredicted RBP14.7□□□□□ -0.06
LINC00477-201ENST00000483544 FPGT-TNNI3KV9GXZ4 949 aa14.7□□□□□ -0.06
LINC00477-201ENST00000483544 PCDH11XQ9BZA7 1347 aa14.69□□□□□ -0.06
LINC00477-201ENST00000483544 PCDH11YQ9BZA8 1340 aa14.69□□□□□ -0.06
LINC00477-201ENST00000483544 CYP27B1O15528 508 aa14.69□□□□□ -0.06
LINC00477-201ENST00000483544 RPS6KB1P23443 525 aa14.69□□□□□ -0.06
LINC00477-201ENST00000483544 PTPN12Q05209 780 aaKnown RBP14.69□□□□□ -0.06
LINC00477-201ENST00000483544 SYCP1Q15431 976 aa14.69□□□□□ -0.06
LINC00477-201ENST00000483544 MTMR6Q9Y217 621 aa14.69□□□□□ -0.06
LINC00477-201ENST00000483544 ELP1O95163 1332 aa14.69□□□□□ -0.06
LINC00477-201ENST00000483544 ADCK5Q3MIX3 580 aa14.69□□□□□ -0.06
LINC00477-201ENST00000483544 CCDC83Q8IWF9 413 aa14.69□□□□□ -0.06
LINC00477-201ENST00000483544 FAM227BQ96M60 508 aa14.69□□□□□ -0.06
LINC00477-201ENST00000483544 HAUS7Q99871 368 aa14.69□□□□□ -0.06
LINC00477-201ENST00000483544 BOLA2Q9H3K6 86 aa14.69□□□□□ -0.06
LINC00477-201ENST00000483544 ATG3Q9NT62 314 aa14.69□□□□□ -0.06
LINC00477-201ENST00000483544 H7C1W4 665 aa14.68□□□□□ -0.06
LINC00477-201ENST00000483544 CCDC172P0C7W6 258 aa14.68□□□□□ -0.06
LINC00477-201ENST00000483544 CASP7P55210 303 aa14.68□□□□□ -0.06
LINC00477-201ENST00000483544 USP16Q9Y5T5 823 aa14.68□□□□□ -0.06
LINC00477-201ENST00000483544 PALLDQ8WX93 1383 aa14.67□□□□□ -0.06
LINC00477-201ENST00000483544 A0A0D9SFI3 127 aa14.67□□□□□ -0.06
LINC00477-201ENST00000483544 TAF5LO75529 589 aa14.67□□□□□ -0.06
LINC00477-201ENST00000483544 NKX1-1Q15270 411 aaPredicted RBP14.67□□□□□ -0.06
LINC00477-201ENST00000483544 FAM43BQ6ZT52 329 aaPredicted RBP14.67□□□□□ -0.06
LINC00477-201ENST00000483544 SIL1Q9H173 461 aa14.67□□□□□ -0.06
LINC00477-201ENST00000483544 SH3TC1Q8TE82 1336 aa14.67□□□□□ -0.06
LINC00477-201ENST00000483544 A0A087WZG4 1122 aa14.66□□□□□ -0.06
LINC00477-201ENST00000483544 LOC102724159A0A0B4J2E5 919 aa14.66□□□□□ -0.06
LINC00477-201ENST00000483544 KIF1CO43896 1103 aaKnown RBP14.66□□□□□ -0.06
LINC00477-201ENST00000483544 NOP2P46087 812 aaKnown RBP14.66□□□□□ -0.06
LINC00477-201ENST00000483544 KIAA2012Q0VF49 1180 aa14.66□□□□□ -0.06
LINC00477-201ENST00000483544 PWP2Q15269 919 aaKnown RBP14.66□□□□□ -0.06
LINC00477-201ENST00000483544 ME3Q16798 604 aa14.66□□□□□ -0.06
LINC00477-201ENST00000483544 EPHA10Q5JZY3 1008 aa14.66□□□□□ -0.06
LINC00477-201ENST00000483544 CNPY2Q9Y2B0 182 aa14.66□□□□□ -0.06
LINC00477-201ENST00000483544 WDR17Q8IZU2 1322 aa14.66□□□□□ -0.06
LINC00477-201ENST00000483544 TJP1Q07157 1748 aa14.66□□□□□ -0.06
LINC00477-201ENST00000483544 GADD45BO75293 160 aaPredicted RBP14.66□□□□□ -0.06
LINC00477-201ENST00000483544 LARGE1O95461 756 aa14.66□□□□□ -0.06
LINC00477-201ENST00000483544 KRT85P78386 507 aa14.66□□□□□ -0.06
LINC00477-201ENST00000483544 TERF2Q15554 542 aa14.66□□□□□ -0.06
LINC00477-201ENST00000483544 LRRFIP1Q32MZ4 808 aaKnown RBP14.66□□□□□ -0.06
LINC00477-201ENST00000483544 MCMDC2Q4G0Z9 681 aa14.66□□□□□ -0.06
LINC00477-201ENST00000483544 UBE3BQ7Z3V4 1068 aa14.66□□□□□ -0.06
LINC00477-201ENST00000483544 CCDC191Q8NCU4 936 aa14.66□□□□□ -0.06
LINC00477-201ENST00000483544 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.66□□□□□ -0.06
LINC00477-201ENST00000483544 HELLSQ9NRZ9 838 aa14.66□□□□□ -0.06
LINC00477-201ENST00000483544 RBM28Q9NW13 759 aaKnown RBP14.66□□□□□ -0.06
LINC00477-201ENST00000483544 TLR7Q9NYK1 1049 aaKnown RBP14.66□□□□□ -0.06
LINC00477-201ENST00000483544 DBNLQ9UJU6 430 aaKnown RBP14.66□□□□□ -0.06
LINC00477-201ENST00000483544 CIAO1O76071 339 aa14.65□□□□□ -0.06
LINC00477-201ENST00000483544 GTF2A1P52655 376 aaPredicted RBP14.65□□□□□ -0.06
LINC00477-201ENST00000483544 TFCP2Q12800 502 aa14.65□□□□□ -0.06
LINC00477-201ENST00000483544 LARP1BQ659C4 914 aaKnown RBP14.65□□□□□ -0.06
LINC00477-201ENST00000483544 NBPF11Q86T75 865 aa14.65□□□□□ -0.06
LINC00477-201ENST00000483544 ZCRB1Q8TBF4 217 aaKnown RBP14.65□□□□□ -0.06
LINC00477-201ENST00000483544 SCAND2PQ9GZW5 306 aaPredicted RBP14.65□□□□□ -0.06
LINC00477-201ENST00000483544 CWC25Q9NXE8 425 aaPredicted RBP14.65□□□□□ -0.06
LINC00477-201ENST00000483544 TPCN1Q9ULQ1 816 aa14.65□□□□□ -0.06
LINC00477-201ENST00000483544 XIRP1Q702N8 1843 aaKnown RBP14.64□□□□□ -0.07
LINC00477-201ENST00000483544 ZNF335Q9H4Z2 1342 aaPredicted RBP14.64□□□□□ -0.07
LINC00477-201ENST00000483544 IL15P40933 162 aaPredicted RBP14.64□□□□□ -0.07
LINC00477-201ENST00000483544 KBTBD3Q8NAB2 608 aa14.64□□□□□ -0.07
LINC00477-201ENST00000483544 LLPHQ9BRT6 129 aaKnown RBP14.64□□□□□ -0.07
LINC00477-201ENST00000483544 TNS2Q63HR2 1409 aa14.64□□□□□ -0.07
LINC00477-201ENST00000483544 CHAMP1Q96JM3 812 aa14.63□□□□□ -0.07
LINC00477-201ENST00000483544 DSCC1Q9BVC3 393 aa14.63□□□□□ -0.07
LINC00477-201ENST00000483544 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms