RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 CREBZFQ9NS37 354 aa12.17□□□□□ -0.46
HMG20B-210ENST00000483417 PODXL2Q9NZ53 605 aa12.17□□□□□ -0.46
HMG20B-210ENST00000483417 GPRC5DQ9NZD1 345 aa12.17□□□□□ -0.46
HMG20B-210ENST00000483417 CACNA1FO60840 1977 aa12.17□□□□□ -0.46
HMG20B-210ENST00000483417 PTPRCP08575 1304 aa12.16□□□□□ -0.46
HMG20B-210ENST00000483417 CASP7P55210 303 aa12.16□□□□□ -0.46
HMG20B-210ENST00000483417 GCKRQ14397 625 aa12.16□□□□□ -0.46
HMG20B-210ENST00000483417 CCDC152Q4G0S7 254 aa12.16□□□□□ -0.46
HMG20B-210ENST00000483417 ZKSCAN2Q63HK3 967 aa12.16□□□□□ -0.46
HMG20B-210ENST00000483417 MAP1SQ66K74 1059 aaPredicted RBP12.16□□□□□ -0.46
HMG20B-210ENST00000483417 CIAPIN1Q6FI81 312 aa12.16□□□□□ -0.46
HMG20B-210ENST00000483417 ATF7IPQ6VMQ6 1270 aa12.16□□□□□ -0.46
HMG20B-210ENST00000483417 USP50Q70EL3 339 aaPredicted RBP12.16□□□□□ -0.46
HMG20B-210ENST00000483417 TBC1D16Q8TBP0 767 aa12.16□□□□□ -0.46
HMG20B-210ENST00000483417 PANK1Q8TE04 598 aa12.16□□□□□ -0.46
HMG20B-210ENST00000483417 CLEC11AQ9Y240 323 aa12.16□□□□□ -0.46
HMG20B-210ENST00000483417 RAD17O75943 681 aa12.15□□□□□ -0.46
HMG20B-210ENST00000483417 GMPSP49915 693 aaPredicted RBP12.15□□□□□ -0.46
HMG20B-210ENST00000483417 NEXNQ0ZGT2 675 aa12.15□□□□□ -0.46
HMG20B-210ENST00000483417 WASHC4Q2M389 1173 aa12.15□□□□□ -0.46
HMG20B-210ENST00000483417 TMEM57Q8N5G2 664 aa12.15□□□□□ -0.46
HMG20B-210ENST00000483417 LINS1Q8NG48 757 aa12.15□□□□□ -0.46
HMG20B-210ENST00000483417 API5Q9BZZ5 524 aaKnown RBP12.15□□□□□ -0.46
HMG20B-210ENST00000483417 USP44Q9H0E7 712 aa12.15□□□□□ -0.46
HMG20B-210ENST00000483417 PGAP2Q9UHJ9 254 aa12.15□□□□□ -0.46
HMG20B-210ENST00000483417 SUPT16HQ9Y5B9 1047 aaKnown RBP12.15□□□□□ -0.46
HMG20B-210ENST00000483417 C6orf229H3BNL8 230 aa12.14□□□□□ -0.47
HMG20B-210ENST00000483417 RIMBP2O15034 1052 aa12.14□□□□□ -0.47
HMG20B-210ENST00000483417 IPO8O15397 1037 aaKnown RBP12.14□□□□□ -0.47
HMG20B-210ENST00000483417 NBPF7P0C2Y1 421 aaPredicted RBP12.14□□□□□ -0.47
HMG20B-210ENST00000483417 LMOD1P29536 600 aaPredicted RBP12.14□□□□□ -0.47
HMG20B-210ENST00000483417 HIRAP54198 1017 aaPredicted RBP12.14□□□□□ -0.47
HMG20B-210ENST00000483417 CTSWP56202 376 aa12.14□□□□□ -0.47
HMG20B-210ENST00000483417 TNIP1Q15025 636 aa12.14□□□□□ -0.47
HMG20B-210ENST00000483417 CCDC85AQ96PX6 553 aaPredicted RBP12.14□□□□□ -0.47
HMG20B-210ENST00000483417 PLA2G12BQ9BX93 195 aa12.14□□□□□ -0.47
HMG20B-210ENST00000483417 KCNQ5Q9NR82 932 aa12.14□□□□□ -0.47
HMG20B-210ENST00000483417 ADARB2Q9NS39 739 aaKnown RBP12.14□□□□□ -0.47
HMG20B-210ENST00000483417 RTL9Q8NET4 1388 aa12.14□□□□□ -0.47
HMG20B-210ENST00000483417 WTIPA6NIX2 430 aaPredicted RBP12.13□□□□□ -0.47
HMG20B-210ENST00000483417 TMEM88BA6NKF7 163 aa12.13□□□□□ -0.47
HMG20B-210ENST00000483417 CSF1RP07333 972 aa12.13□□□□□ -0.47
HMG20B-210ENST00000483417 EPHA10Q5JZY3 1008 aa12.13□□□□□ -0.47
HMG20B-210ENST00000483417 INTS3Q68E01 1043 aaKnown RBP12.13□□□□□ -0.47
HMG20B-210ENST00000483417 DPF2Q92785 391 aa12.13□□□□□ -0.47
HMG20B-210ENST00000483417 KAZALD1Q96I82 304 aa12.13□□□□□ -0.47
HMG20B-210ENST00000483417 GPR101Q96P66 508 aaPredicted RBP12.13□□□□□ -0.47
HMG20B-210ENST00000483417 SRCIN1Q9C0H9 1055 aa12.13□□□□□ -0.47
HMG20B-210ENST00000483417 GREM2Q9H772 168 aa12.13□□□□□ -0.47
HMG20B-210ENST00000483417 DBNDD1Q9H9R9 158 aa12.13□□□□□ -0.47
HMG20B-210ENST00000483417 SHTN1A0MZ66 631 aa12.12□□□□□ -0.47
HMG20B-210ENST00000483417 ALDH1L1O75891 902 aa12.12□□□□□ -0.47
HMG20B-210ENST00000483417 FMR1Q06787 632 aaKnown RBP eCLIP12.12□□□□□ -0.47
HMG20B-210ENST00000483417 DOK7Q18PE1 504 aa12.12□□□□□ -0.47
HMG20B-210ENST00000483417 UBE3BQ7Z3V4 1068 aa12.12□□□□□ -0.47
HMG20B-210ENST00000483417 ANKRD18AQ8IVF6 992 aa12.12□□□□□ -0.47
HMG20B-210ENST00000483417 DZIP1LQ8IYY4 767 aaKnown RBP12.12□□□□□ -0.47
HMG20B-210ENST00000483417 EYA3Q99504 573 aa12.12□□□□□ -0.47
HMG20B-210ENST00000483417 ZC3H12CQ9C0D7 883 aaKnown RBP12.12□□□□□ -0.47
HMG20B-210ENST00000483417 CNOT7Q9UIV1 285 aaKnown RBP12.12□□□□□ -0.47
HMG20B-210ENST00000483417 MINPP1Q9UNW1 487 aa12.12□□□□□ -0.47
HMG20B-210ENST00000483417 ZBTB12Q9Y330 459 aaPredicted RBP12.12□□□□□ -0.47
HMG20B-210ENST00000483417 CNTNAP1P78357 1384 aa12.11□□□□□ -0.47
HMG20B-210ENST00000483417 PSMD14O00487 310 aa12.11□□□□□ -0.47
HMG20B-210ENST00000483417 ECE2O60344 883 aa12.11□□□□□ -0.47
HMG20B-210ENST00000483417 CST9Q5W186 159 aa12.11□□□□□ -0.47
HMG20B-210ENST00000483417 BSDC1Q9NW68 430 aaPredicted RBP12.11□□□□□ -0.47
HMG20B-210ENST00000483417 MKRN1Q9UHC7 482 aaKnown RBP12.11□□□□□ -0.47
HMG20B-210ENST00000483417 GGA1Q9UJY5 639 aa12.11□□□□□ -0.47
HMG20B-210ENST00000483417 COG6Q9Y2V7 657 aa12.11□□□□□ -0.47
HMG20B-210ENST00000483417 KIF16BQ96L93 1317 aa12.11□□□□□ -0.47
HMG20B-210ENST00000483417 RASSF10A6NK89 507 aa12.1□□□□□ -0.47
HMG20B-210ENST00000483417 GRM8O00222 908 aa12.1□□□□□ -0.47
HMG20B-210ENST00000483417 ZBTB7BO15156 539 aaPredicted RBP12.1□□□□□ -0.47
HMG20B-210ENST00000483417 UFL1O94874 794 aa12.1□□□□□ -0.47
HMG20B-210ENST00000483417 VIL1P09327 827 aaKnown RBP12.1□□□□□ -0.47
HMG20B-210ENST00000483417 ATP2B4P23634 1241 aa12.1□□□□□ -0.47
HMG20B-210ENST00000483417 FOXO4P98177 505 aa12.1□□□□□ -0.47
HMG20B-210ENST00000483417 TRPM4Q8TD43 1214 aa12.1□□□□□ -0.47
HMG20B-210ENST00000483417 ZC3H15Q8WU90 426 aaKnown RBP12.1□□□□□ -0.47
HMG20B-210ENST00000483417 SUCLG2Q96I99 432 aa12.1□□□□□ -0.47
HMG20B-210ENST00000483417 CDC5LQ99459 802 aaKnown RBP12.1□□□□□ -0.47
HMG20B-210ENST00000483417 MEIS3Q99687 375 aa12.1□□□□□ -0.47
HMG20B-210ENST00000483417 ANKIB1Q9P2G1 1089 aa12.1□□□□□ -0.47
HMG20B-210ENST00000483417 XDHP47989 1333 aa12.1□□□□□ -0.47
HMG20B-210ENST00000483417 TRAF5O00463 557 aa12.09□□□□□ -0.47
HMG20B-210ENST00000483417 RPS12P25398 132 aaKnown RBP12.09□□□□□ -0.47
HMG20B-210ENST00000483417 CCT4P50991 539 aaKnown RBP12.09□□□□□ -0.47
HMG20B-210ENST00000483417 RRP1P56182 461 aaKnown RBP12.09□□□□□ -0.47
HMG20B-210ENST00000483417 IFFO2Q5TF58 517 aa12.09□□□□□ -0.47
HMG20B-210ENST00000483417 C9orf78Q9NZ63 289 aaPredicted RBP12.09□□□□□ -0.47
HMG20B-210ENST00000483417 PCNTO95613 3336 aa12.08□□□□□ -0.48
HMG20B-210ENST00000483417 H7C1D1 291 aa12.08□□□□□ -0.48
HMG20B-210ENST00000483417 EGFRP00533 1210 aa12.08□□□□□ -0.48
HMG20B-210ENST00000483417 HSPA1AP0DMV8 641 aaKnown RBP12.08□□□□□ -0.48
HMG20B-210ENST00000483417 HSPA1BP0DMV9 641 aaKnown RBP12.08□□□□□ -0.48
HMG20B-210ENST00000483417 ITGA6P23229 1130 aa12.08□□□□□ -0.48
HMG20B-210ENST00000483417 VEGFBP49765 207 aa12.08□□□□□ -0.48
HMG20B-210ENST00000483417 DEFB115Q30KQ5 88 aa12.08□□□□□ -0.48
HMG20B-210ENST00000483417 SAMD7Q7Z3H4 446 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms