RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 FZD9O00144 591 aa16.85■□□□□ 0.29
SSR1-208ENST00000483409 KIF3CO14782 793 aa16.85■□□□□ 0.29
SSR1-208ENST00000483409 RIMBP2O15034 1052 aa16.85■□□□□ 0.29
SSR1-208ENST00000483409 DDNO94850 711 aaPredicted RBP16.85■□□□□ 0.29
SSR1-208ENST00000483409 UFL1O94874 794 aa16.85■□□□□ 0.29
SSR1-208ENST00000483409 KIAA2012Q0VF49 1180 aa16.85■□□□□ 0.29
SSR1-208ENST00000483409 CCDC57Q2TAC2 916 aa16.85■□□□□ 0.29
SSR1-208ENST00000483409 ZKSCAN2Q63HK3 967 aa16.85■□□□□ 0.29
SSR1-208ENST00000483409 TBC1D16Q8TBP0 767 aa16.85■□□□□ 0.29
SSR1-208ENST00000483409 VPS33BQ9H267 617 aa16.85■□□□□ 0.29
SSR1-208ENST00000483409 PODXL2Q9NZ53 605 aa16.85■□□□□ 0.29
SSR1-208ENST00000483409 GGA1Q9UJY5 639 aa16.85■□□□□ 0.29
SSR1-208ENST00000483409 MINPP1Q9UNW1 487 aa16.85■□□□□ 0.29
SSR1-208ENST00000483409 XDHP47989 1333 aa16.85■□□□□ 0.29
SSR1-208ENST00000483409 WASHC4Q2M389 1173 aa16.84■□□□□ 0.29
SSR1-208ENST00000483409 TAF7LQ5H9L4 462 aa16.84■□□□□ 0.29
SSR1-208ENST00000483409 INTS3Q68E01 1043 aaKnown RBP16.84■□□□□ 0.29
SSR1-208ENST00000483409 ZNF594Q96JF6 807 aaPredicted RBP16.84■□□□□ 0.29
SSR1-208ENST00000483409 UBTFL1P0CB47 393 aaPredicted RBP16.83■□□□□ 0.28
SSR1-208ENST00000483409 SCN4AP35499 1836 aa16.83■□□□□ 0.28
SSR1-208ENST00000483409 EIF6P56537 245 aaKnown RBP16.83■□□□□ 0.28
SSR1-208ENST00000483409 RABL6Q3YEC7 729 aaPredicted RBP16.83■□□□□ 0.28
SSR1-208ENST00000483409 ANKRD44Q8N8A2 993 aa16.83■□□□□ 0.28
SSR1-208ENST00000483409 EYA3Q99504 573 aa16.83■□□□□ 0.28
SSR1-208ENST00000483409 MEIS3Q99687 375 aa16.83■□□□□ 0.28
SSR1-208ENST00000483409 SCN9AQ15858 1988 aa16.82■□□□□ 0.28
SSR1-208ENST00000483409 ZNRF3Q9ULT6 936 aa16.82■□□□□ 0.28
SSR1-208ENST00000483409 WTIPA6NIX2 430 aaPredicted RBP16.81■□□□□ 0.28
SSR1-208ENST00000483409 ATP2B4P23634 1241 aa16.81■□□□□ 0.28
SSR1-208ENST00000483409 FTSJ3Q8IY81 847 aaKnown RBP16.81■□□□□ 0.28
SSR1-208ENST00000483409 TMEM57Q8N5G2 664 aa16.81■□□□□ 0.28
SSR1-208ENST00000483409 DBNDD1Q9H9R9 158 aa16.81■□□□□ 0.28
SSR1-208ENST00000483409 CNNM1Q9NRU3 951 aa16.81■□□□□ 0.28
SSR1-208ENST00000483409 LRRFIP2Q9Y608 721 aaKnown RBP16.81■□□□□ 0.28
SSR1-208ENST00000483409 GJA3Q9Y6H8 435 aa16.81■□□□□ 0.28
SSR1-208ENST00000483409 PSME4Q14997 1843 aa16.8■□□□□ 0.28
SSR1-208ENST00000483409 POTECB2RU33 542 aa16.8■□□□□ 0.28
SSR1-208ENST00000483409 CHRNDQ07001 517 aa16.8■□□□□ 0.28
SSR1-208ENST00000483409 DOK7Q18PE1 504 aa16.8■□□□□ 0.28
SSR1-208ENST00000483409 LDHAL6AQ6ZMR3 332 aa16.8■□□□□ 0.28
SSR1-208ENST00000483409 ZC3H12CQ9C0D7 883 aaKnown RBP16.8■□□□□ 0.28
SSR1-208ENST00000483409 RCAN3Q9UKA8 241 aa16.8■□□□□ 0.28
SSR1-208ENST00000483409 YDJCA8MPS7 323 aa16.79■□□□□ 0.28
SSR1-208ENST00000483409 ECE2O60344 883 aa16.79■□□□□ 0.28
SSR1-208ENST00000483409 RAD17O75943 681 aa16.79■□□□□ 0.28
SSR1-208ENST00000483409 RLBP1P12271 317 aa16.79■□□□□ 0.28
SSR1-208ENST00000483409 VEGFAP15692 232 aaPredicted RBP16.79■□□□□ 0.28
SSR1-208ENST00000483409 C16orf71Q8IYS4 520 aaPredicted RBP16.79■□□□□ 0.28
SSR1-208ENST00000483409 DZIP1LQ8IYY4 767 aaKnown RBP16.79■□□□□ 0.28
SSR1-208ENST00000483409 GPC2Q8N158 579 aa16.79■□□□□ 0.28
SSR1-208ENST00000483409 HELBQ8NG08 1087 aaPredicted RBP16.79■□□□□ 0.28
SSR1-208ENST00000483409 ANKRD2Q9GZV1 360 aa16.79■□□□□ 0.28
SSR1-208ENST00000483409 G3V3G9 751 aa16.78■□□□□ 0.28
SSR1-208ENST00000483409 TAF5LO75529 589 aa16.78■□□□□ 0.28
SSR1-208ENST00000483409 GNAI3P08754 354 aa16.78■□□□□ 0.28
SSR1-208ENST00000483409 KCNJ4P48050 445 aa16.78■□□□□ 0.28
SSR1-208ENST00000483409 C1QTNF8P60827 252 aa16.78■□□□□ 0.28
SSR1-208ENST00000483409 CXCL9Q07325 125 aa16.78■□□□□ 0.28
SSR1-208ENST00000483409 DCAF8Q5TAQ9 597 aa16.78■□□□□ 0.28
SSR1-208ENST00000483409 KLHDC4Q8TBB5 520 aa16.78■□□□□ 0.28
SSR1-208ENST00000483409 L3MBTL3Q96JM7 780 aaPredicted RBP16.78■□□□□ 0.28
SSR1-208ENST00000483409 PUS3Q9BZE2 481 aaKnown RBP16.78■□□□□ 0.28
SSR1-208ENST00000483409 ZNF804BA4D1E1 1349 aa16.77■□□□□ 0.28
SSR1-208ENST00000483409 SNAP23O00161 211 aa16.77■□□□□ 0.28
SSR1-208ENST00000483409 PLIN1O60240 522 aa16.77■□□□□ 0.28
SSR1-208ENST00000483409 CIAPIN1Q6FI81 312 aa16.77■□□□□ 0.28
SSR1-208ENST00000483409 ITPRIPQ8IWB1 547 aa16.77■□□□□ 0.28
SSR1-208ENST00000483409 HDAC5Q9UQL6 1122 aa16.77■□□□□ 0.28
SSR1-208ENST00000483409 LEMD3Q9Y2U8 911 aa16.77■□□□□ 0.28
SSR1-208ENST00000483409 MED23Q9ULK4 1368 aa16.77■□□□□ 0.27
SSR1-208ENST00000483409 TOMM70O94826 608 aa16.76■□□□□ 0.27
SSR1-208ENST00000483409 KLRK1P26718 216 aa16.76■□□□□ 0.27
SSR1-208ENST00000483409 PANK1Q8TE04 598 aa16.76■□□□□ 0.27
SSR1-208ENST00000483409 KCNQ5Q9NR82 932 aa16.76■□□□□ 0.27
SSR1-208ENST00000483409 IQCA1LA6NCM1 817 aa16.75■□□□□ 0.27
SSR1-208ENST00000483409 RFX5P48382 616 aaPredicted RBP16.75■□□□□ 0.27
SSR1-208ENST00000483409 LRRC24Q50LG9 513 aa16.75■□□□□ 0.27
SSR1-208ENST00000483409 TXNRD3Q86VQ6 643 aa16.75■□□□□ 0.27
SSR1-208ENST00000483409 HACL1Q9UJ83 578 aa16.75■□□□□ 0.27
SSR1-208ENST00000483409 ZNF646O15015 1829 aaPredicted RBP16.75■□□□□ 0.27
SSR1-208ENST00000483409 PSMD14O00487 310 aa16.74■□□□□ 0.27
SSR1-208ENST00000483409 SCNN1DP51172 638 aa16.74■□□□□ 0.27
SSR1-208ENST00000483409 TNIP1Q15025 636 aa16.74■□□□□ 0.27
SSR1-208ENST00000483409 TAF1DQ9H5J8 278 aaPredicted RBP16.74■□□□□ 0.27
SSR1-208ENST00000483409 RIPOR2Q9Y4F9 1068 aa16.74■□□□□ 0.27
SSR1-208ENST00000483409 GNAI2P04899 355 aa16.73■□□□□ 0.27
SSR1-208ENST00000483409 LMOD1P29536 600 aaPredicted RBP16.73■□□□□ 0.27
SSR1-208ENST00000483409 EPHX2P34913 555 aa16.73■□□□□ 0.27
SSR1-208ENST00000483409 GMPSP49915 693 aaPredicted RBP16.73■□□□□ 0.27
SSR1-208ENST00000483409 PTPN12Q05209 780 aaKnown RBP16.73■□□□□ 0.27
SSR1-208ENST00000483409 METTL24Q5JXM2 366 aa16.73■□□□□ 0.27
SSR1-208ENST00000483409 RBM46Q8TBY0 533 aaKnown RBP16.73■□□□□ 0.27
SSR1-208ENST00000483409 MROH5Q6ZUA9 1318 aa16.72■□□□□ 0.27
SSR1-208ENST00000483409 POTEIP0CG38 1075 aa16.72■□□□□ 0.27
SSR1-208ENST00000483409 POTEJP0CG39 1038 aa16.72■□□□□ 0.27
SSR1-208ENST00000483409 EPS15P42566 896 aa16.72■□□□□ 0.27
SSR1-208ENST00000483409 EAPPQ56P03 285 aaPredicted RBP16.72■□□□□ 0.27
SSR1-208ENST00000483409 SIL1Q9H173 461 aa16.72■□□□□ 0.27
SSR1-208ENST00000483409 ZBTB12Q9Y330 459 aaPredicted RBP16.72■□□□□ 0.27
SSR1-208ENST00000483409 ADAMTSL1Q8N6G6 1762 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms