RNA–Protein interactions for RNA: ENST00000483009.1

CCDC28B-205, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 5

Gene CCDC28B, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-205ENST00000483009 GPR101Q96P66 508 aaPredicted RBP19.84■□□□□ 0.77
CCDC28B-205ENST00000483009 YDJCA8MPS7 323 aa19.83■□□□□ 0.77
CCDC28B-205ENST00000483009 LMOD1P29536 600 aaPredicted RBP19.83■□□□□ 0.77
CCDC28B-205ENST00000483009 EPHX2P34913 555 aa19.83■□□□□ 0.77
CCDC28B-205ENST00000483009 EPHA10Q5JZY3 1008 aa19.83■□□□□ 0.77
CCDC28B-205ENST00000483009 MINPP1Q9UNW1 487 aa19.83■□□□□ 0.77
CCDC28B-205ENST00000483009 ANKRD18BA2A2Z9 1011 aa19.82■□□□□ 0.76
CCDC28B-205ENST00000483009 POTEIP0CG38 1075 aa19.82■□□□□ 0.76
CCDC28B-205ENST00000483009 POTEJP0CG39 1038 aa19.82■□□□□ 0.76
CCDC28B-205ENST00000483009 ATP2B4P23634 1241 aa19.82■□□□□ 0.76
CCDC28B-205ENST00000483009 SCNN1DP51172 638 aa19.82■□□□□ 0.76
CCDC28B-205ENST00000483009 APLP1P51693 650 aa19.82■□□□□ 0.76
CCDC28B-205ENST00000483009 RARSP54136 660 aaKnown RBP19.82■□□□□ 0.76
CCDC28B-205ENST00000483009 LMBR1LQ6UX01 489 aa19.82■□□□□ 0.76
CCDC28B-205ENST00000483009 LDHDQ86WU2 507 aa19.82■□□□□ 0.76
CCDC28B-205ENST00000483009 MPHOSPH8Q99549 860 aa19.82■□□□□ 0.76
CCDC28B-205ENST00000483009 ZC3H12CQ9C0D7 883 aaKnown RBP19.82■□□□□ 0.76
CCDC28B-205ENST00000483009 DBNDD1Q9H9R9 158 aa19.82■□□□□ 0.76
CCDC28B-205ENST00000483009 CHMP3Q9Y3E7 222 aa19.82■□□□□ 0.76
CCDC28B-205ENST00000483009 LTBP1Q14766 1721 aa19.82■□□□□ 0.76
CCDC28B-205ENST00000483009 UTYO14607 1347 aa19.81■□□□□ 0.76
CCDC28B-205ENST00000483009 RAD17O75943 681 aa19.81■□□□□ 0.76
CCDC28B-205ENST00000483009 IFIT5Q13325 482 aaKnown RBP19.81■□□□□ 0.76
CCDC28B-205ENST00000483009 TNIP1Q15025 636 aa19.81■□□□□ 0.76
CCDC28B-205ENST00000483009 EAPPQ56P03 285 aaPredicted RBP19.81■□□□□ 0.76
CCDC28B-205ENST00000483009 CHADLQ6NUI6 762 aa19.81■□□□□ 0.76
CCDC28B-205ENST00000483009 PNMA8AQ86V59 439 aaPredicted RBP19.81■□□□□ 0.76
CCDC28B-205ENST00000483009 SUCLG2Q96I99 432 aa19.81■□□□□ 0.76
CCDC28B-205ENST00000483009 MYH3P11055 1940 aa19.8■□□□□ 0.76
CCDC28B-205ENST00000483009 ECE2O60344 883 aa19.8■□□□□ 0.76
CCDC28B-205ENST00000483009 NBPF7P0C2Y1 421 aaPredicted RBP19.8■□□□□ 0.76
CCDC28B-205ENST00000483009 DOK7Q18PE1 504 aa19.8■□□□□ 0.76
CCDC28B-205ENST00000483009 NOB1Q9ULX3 412 aaKnown RBP19.8■□□□□ 0.76
CCDC28B-205ENST00000483009 SCN4AP35499 1836 aa19.8■□□□□ 0.76
CCDC28B-205ENST00000483009 EPS15P42566 896 aa19.79■□□□□ 0.76
CCDC28B-205ENST00000483009 GMPSP49915 693 aaPredicted RBP19.79■□□□□ 0.76
CCDC28B-205ENST00000483009 API5Q9BZZ5 524 aaKnown RBP19.79■□□□□ 0.76
CCDC28B-205ENST00000483009 KIF16BQ96L93 1317 aa19.78■□□□□ 0.76
CCDC28B-205ENST00000483009 CCT4P50991 539 aaKnown RBP19.78■□□□□ 0.76
CCDC28B-205ENST00000483009 CCDC57Q2TAC2 916 aa19.78■□□□□ 0.76
CCDC28B-205ENST00000483009 KAZALD1Q96I82 304 aa19.78■□□□□ 0.76
CCDC28B-205ENST00000483009 ANKRD2Q9GZV1 360 aa19.78■□□□□ 0.76
CCDC28B-205ENST00000483009 GPRC5DQ9NZD1 345 aa19.78■□□□□ 0.76
CCDC28B-205ENST00000483009 ZBED9Q6R2W3 1325 aa19.77■□□□□ 0.76
CCDC28B-205ENST00000483009 G3V3G9 751 aa19.77■□□□□ 0.76
CCDC28B-205ENST00000483009 PSMD14O00487 310 aa19.77■□□□□ 0.76
CCDC28B-205ENST00000483009 DCAF8Q5TAQ9 597 aa19.77■□□□□ 0.76
CCDC28B-205ENST00000483009 LEMD3Q9Y2U8 911 aa19.77■□□□□ 0.76
CCDC28B-205ENST00000483009 MED23Q9ULK4 1368 aa19.76■□□□□ 0.75
CCDC28B-205ENST00000483009 CHRNDQ07001 517 aa19.76■□□□□ 0.75
CCDC28B-205ENST00000483009 TAF7LQ5H9L4 462 aa19.76■□□□□ 0.75
CCDC28B-205ENST00000483009 USP44Q9H0E7 712 aa19.76■□□□□ 0.75
CCDC28B-205ENST00000483009 CLEC11AQ9Y240 323 aa19.76■□□□□ 0.75
CCDC28B-205ENST00000483009 WTIPA6NIX2 430 aaPredicted RBP19.75■□□□□ 0.75
CCDC28B-205ENST00000483009 RABL6Q3YEC7 729 aaPredicted RBP19.75■□□□□ 0.75
CCDC28B-205ENST00000483009 USP50Q70EL3 339 aaPredicted RBP19.75■□□□□ 0.75
CCDC28B-205ENST00000483009 ARHGAP45Q92619 1136 aa19.75■□□□□ 0.75
CCDC28B-205ENST00000483009 BICC1Q9H694 974 aaKnown RBP19.75■□□□□ 0.75
CCDC28B-205ENST00000483009 ADARB2Q9NS39 739 aaKnown RBP19.75■□□□□ 0.75
CCDC28B-205ENST00000483009 ANKRD44Q8N8A2 993 aa19.74■□□□□ 0.75
CCDC28B-205ENST00000483009 ZNF594Q96JF6 807 aaPredicted RBP19.74■□□□□ 0.75
CCDC28B-205ENST00000483009 KCNQ5Q9NR82 932 aa19.74■□□□□ 0.75
CCDC28B-205ENST00000483009 ZNF804BA4D1E1 1349 aa19.74■□□□□ 0.75
CCDC28B-205ENST00000483009 RPS12P25398 132 aaKnown RBP19.73■□□□□ 0.75
CCDC28B-205ENST00000483009 KCNJ4P48050 445 aa19.73■□□□□ 0.75
CCDC28B-205ENST00000483009 LDHAL6AQ6ZMR3 332 aa19.73■□□□□ 0.75
CCDC28B-205ENST00000483009 PODNQ7Z5L7 613 aa19.73■□□□□ 0.75
CCDC28B-205ENST00000483009 DPF2Q92785 391 aa19.73■□□□□ 0.75
CCDC28B-205ENST00000483009 ZBTB12Q9Y330 459 aaPredicted RBP19.73■□□□□ 0.75
CCDC28B-205ENST00000483009 VIL1P09327 827 aaKnown RBP19.72■□□□□ 0.75
CCDC28B-205ENST00000483009 CNNM1Q9NRU3 951 aa19.72■□□□□ 0.75
CCDC28B-205ENST00000483009 CNOT7Q9UIV1 285 aaKnown RBP19.72■□□□□ 0.75
CCDC28B-205ENST00000483009 H7C1D1 291 aa19.71■□□□□ 0.75
CCDC28B-205ENST00000483009 IPO8O15397 1037 aaKnown RBP19.71■□□□□ 0.75
CCDC28B-205ENST00000483009 BCAR3O75815 825 aa19.71■□□□□ 0.75
CCDC28B-205ENST00000483009 HTRA3P83110 453 aa19.71■□□□□ 0.75
CCDC28B-205ENST00000483009 MAP1SQ66K74 1059 aaPredicted RBP19.71■□□□□ 0.75
CCDC28B-205ENST00000483009 MICALL2Q8IY33 904 aa19.71■□□□□ 0.75
CCDC28B-205ENST00000483009 HELBQ8NG08 1087 aaPredicted RBP19.71■□□□□ 0.75
CCDC28B-205ENST00000483009 COA1Q9GZY4 146 aa19.71■□□□□ 0.75
CCDC28B-205ENST00000483009 PASKQ96RG2 1323 aa19.71■□□□□ 0.75
CCDC28B-205ENST00000483009 ADAMTSL1Q8N6G6 1762 aa19.7■□□□□ 0.74
CCDC28B-205ENST00000483009 SHTN1A0MZ66 631 aa19.7■□□□□ 0.74
CCDC28B-205ENST00000483009 TAF5LO75529 589 aa19.7■□□□□ 0.74
CCDC28B-205ENST00000483009 ITGBL1O95965 494 aaPredicted RBP19.7■□□□□ 0.74
CCDC28B-205ENST00000483009 UBTFL1P0CB47 393 aaPredicted RBP19.7■□□□□ 0.74
CCDC28B-205ENST00000483009 KLRK1P26718 216 aa19.7■□□□□ 0.74
CCDC28B-205ENST00000483009 TXNRD3Q86VQ6 643 aa19.7■□□□□ 0.74
CCDC28B-205ENST00000483009 CNTROBQ8N137 903 aa19.7■□□□□ 0.74
CCDC28B-205ENST00000483009 SPEF2Q9C093 1822 aa19.69■□□□□ 0.74
CCDC28B-205ENST00000483009 TRPM4Q8TD43 1214 aa19.69■□□□□ 0.74
CCDC28B-205ENST00000483009 USP17L3A6NCW0 530 aa19.68■□□□□ 0.74
CCDC28B-205ENST00000483009 USP17L4A6NCW7 530 aa19.68■□□□□ 0.74
CCDC28B-205ENST00000483009 SNAP23O00161 211 aa19.68■□□□□ 0.74
CCDC28B-205ENST00000483009 TRIM27P14373 513 aa19.68■□□□□ 0.74
CCDC28B-205ENST00000483009 INTS3Q68E01 1043 aaKnown RBP19.68■□□□□ 0.74
CCDC28B-205ENST00000483009 RSBN1LQ6PCB5 846 aaPredicted RBP19.68■□□□□ 0.74
CCDC28B-205ENST00000483009 ATF7IPQ6VMQ6 1270 aa19.68■□□□□ 0.74
CCDC28B-205ENST00000483009 C15orf52Q6ZUT6 534 aaKnown RBP19.68■□□□□ 0.74
CCDC28B-205ENST00000483009 USP17L1Q7RTZ2 530 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms