RNA–Protein interactions for RNA: ENST00000482979.5

ZKSCAN1-204, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 1 (best)

Gene ZKSCAN1, Length 1,449 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-204ENST00000482979 NIM1KQ8IY84 436 aa16.79■□□□□ 0.28
ZKSCAN1-204ENST00000482979 CNTROBQ8N137 903 aa16.79■□□□□ 0.28
ZKSCAN1-204ENST00000482979 ISCA1Q9BUE6 129 aa16.79■□□□□ 0.28
ZKSCAN1-204ENST00000482979 RTFDC1Q9BY42 306 aaPredicted RBP16.79■□□□□ 0.28
ZKSCAN1-204ENST00000482979 BBOX1O75936 387 aa16.79■□□□□ 0.28
ZKSCAN1-204ENST00000482979 SP8Q8IXZ3 490 aa16.79■□□□□ 0.28
ZKSCAN1-204ENST00000482979 MEIS3Q99687 375 aa16.79■□□□□ 0.28
ZKSCAN1-204ENST00000482979 CWC25Q9NXE8 425 aaPredicted RBP16.79■□□□□ 0.28
ZKSCAN1-204ENST00000482979 DUOX1Q9NRD9 1551 aa16.78■□□□□ 0.28
ZKSCAN1-204ENST00000482979 GRAPQ13588 217 aa16.78■□□□□ 0.28
ZKSCAN1-204ENST00000482979 GRAPLQ8TC17 118 aaPredicted RBP16.78■□□□□ 0.28
ZKSCAN1-204ENST00000482979 C9orf78Q9NZ63 289 aaPredicted RBP16.78■□□□□ 0.28
ZKSCAN1-204ENST00000482979 LRRC37AA6NMS7 1700 aa16.77■□□□□ 0.28
ZKSCAN1-204ENST00000482979 LMOD1P29536 600 aaPredicted RBP16.77■□□□□ 0.27
ZKSCAN1-204ENST00000482979 VEGFBP49765 207 aa16.77■□□□□ 0.27
ZKSCAN1-204ENST00000482979 FMR1Q06787 632 aaKnown RBP eCLIP16.77■□□□□ 0.27
ZKSCAN1-204ENST00000482979 CXCL9Q07325 125 aa16.77■□□□□ 0.27
ZKSCAN1-204ENST00000482979 GCKRQ14397 625 aa16.77■□□□□ 0.27
ZKSCAN1-204ENST00000482979 DPP8Q6V1X1 898 aaPredicted RBP16.77■□□□□ 0.27
ZKSCAN1-204ENST00000482979 DDX46Q7L014 1031 aaKnown RBP16.77■□□□□ 0.27
ZKSCAN1-204ENST00000482979 CCDC191Q8NCU4 936 aa16.77■□□□□ 0.27
ZKSCAN1-204ENST00000482979 FAM89AQ96GI7 184 aa16.77■□□□□ 0.27
ZKSCAN1-204ENST00000482979 VPS33BQ9H267 617 aa16.77■□□□□ 0.27
ZKSCAN1-204ENST00000482979 TNS4Q8IZW8 715 aa16.76■□□□□ 0.27
ZKSCAN1-204ENST00000482979 MPNDQ8N594 471 aa16.76■□□□□ 0.27
ZKSCAN1-204ENST00000482979 SUPT20HQ8NEM7 779 aa16.76■□□□□ 0.27
ZKSCAN1-204ENST00000482979 JARID2Q92833 1246 aaPredicted RBP16.76■□□□□ 0.27
ZKSCAN1-204ENST00000482979 TMX4Q9H1E5 349 aaPredicted RBP16.76■□□□□ 0.27
ZKSCAN1-204ENST00000482979 CHMP4BQ9H444 224 aaKnown RBP16.76■□□□□ 0.27
ZKSCAN1-204ENST00000482979 C1orf115Q9H7X2 142 aa16.76■□□□□ 0.27
ZKSCAN1-204ENST00000482979 ZNRF3Q9ULT6 936 aa16.76■□□□□ 0.27
ZKSCAN1-204ENST00000482979 GRM8O00222 908 aa16.75■□□□□ 0.27
ZKSCAN1-204ENST00000482979 ZBTB7BO15156 539 aaPredicted RBP16.75■□□□□ 0.27
ZKSCAN1-204ENST00000482979 GNAI3P08754 354 aa16.75■□□□□ 0.27
ZKSCAN1-204ENST00000482979 UBTFL1P0CB47 393 aaPredicted RBP16.75■□□□□ 0.27
ZKSCAN1-204ENST00000482979 KIAA2012Q0VF49 1180 aa16.75■□□□□ 0.27
ZKSCAN1-204ENST00000482979 RTL5Q5HYW3 569 aaPredicted RBP16.75■□□□□ 0.27
ZKSCAN1-204ENST00000482979 USP44Q9H0E7 712 aa16.75■□□□□ 0.27
ZKSCAN1-204ENST00000482979 GTF3C3Q9Y5Q9 886 aa16.75■□□□□ 0.27
ZKSCAN1-204ENST00000482979 TRIM28Q13263 835 aaKnown RBP16.74■□□□□ 0.27
ZKSCAN1-204ENST00000482979 USP50Q70EL3 339 aaPredicted RBP16.74■□□□□ 0.27
ZKSCAN1-204ENST00000482979 UBE3BQ7Z3V4 1068 aa16.74■□□□□ 0.27
ZKSCAN1-204ENST00000482979 CELF1Q92879 486 aaKnown RBP16.74■□□□□ 0.27
ZKSCAN1-204ENST00000482979 GPRC5DQ9NZD1 345 aa16.74■□□□□ 0.27
ZKSCAN1-204ENST00000482979 RASSF10A6NK89 507 aa16.73■□□□□ 0.27
ZKSCAN1-204ENST00000482979 YDJCA8MPS7 323 aa16.73■□□□□ 0.27
ZKSCAN1-204ENST00000482979 FOXN1O15353 648 aa16.73■□□□□ 0.27
ZKSCAN1-204ENST00000482979 NBPF7P0C2Y1 421 aaPredicted RBP16.73■□□□□ 0.27
ZKSCAN1-204ENST00000482979 SF3B3Q15393 1217 aaKnown RBP16.73■□□□□ 0.27
ZKSCAN1-204ENST00000482979 ZBTB40Q9NUA8 1239 aa16.73■□□□□ 0.27
ZKSCAN1-204ENST00000482979 MYH3P11055 1940 aa16.72■□□□□ 0.27
ZKSCAN1-204ENST00000482979 GMPSP49915 693 aaPredicted RBP16.72■□□□□ 0.27
ZKSCAN1-204ENST00000482979 TRAF5O00463 557 aa16.71■□□□□ 0.27
ZKSCAN1-204ENST00000482979 CAPN15O75808 1086 aa16.71■□□□□ 0.27
ZKSCAN1-204ENST00000482979 RAD17O75943 681 aa16.71■□□□□ 0.27
ZKSCAN1-204ENST00000482979 GNAI2P04899 355 aa16.71■□□□□ 0.27
ZKSCAN1-204ENST00000482979 PCCAP05165 728 aaPredicted RBP16.71■□□□□ 0.27
ZKSCAN1-204ENST00000482979 DEFB115Q30KQ5 88 aa16.71■□□□□ 0.27
ZKSCAN1-204ENST00000482979 CIAPIN1Q6FI81 312 aa16.71■□□□□ 0.27
ZKSCAN1-204ENST00000482979 SUCLG2Q96I99 432 aa16.71■□□□□ 0.27
ZKSCAN1-204ENST00000482979 ADARB2Q9NS39 739 aaKnown RBP16.71■□□□□ 0.27
ZKSCAN1-204ENST00000482979 LRRFIP2Q9Y608 721 aaKnown RBP16.71■□□□□ 0.27
ZKSCAN1-204ENST00000482979 UTYO14607 1347 aa16.71■□□□□ 0.27
ZKSCAN1-204ENST00000482979 SHTN1A0MZ66 631 aa16.7■□□□□ 0.26
ZKSCAN1-204ENST00000482979 H7C1W4 665 aa16.7■□□□□ 0.26
ZKSCAN1-204ENST00000482979 IRS4O14654 1257 aaPredicted RBP16.7■□□□□ 0.26
ZKSCAN1-204ENST00000482979 TMC4Q7Z404 712 aa16.7■□□□□ 0.26
ZKSCAN1-204ENST00000482979 ZBTB38Q8NAP3 1195 aaPredicted RBP16.7■□□□□ 0.26
ZKSCAN1-204ENST00000482979 ABT1Q9ULW3 272 aaKnown RBP16.7■□□□□ 0.26
ZKSCAN1-204ENST00000482979 TRPM7Q96QT4 1865 aa16.7■□□□□ 0.26
ZKSCAN1-204ENST00000482979 CASP7P55210 303 aa16.7■□□□□ 0.26
ZKSCAN1-204ENST00000482979 AAMPQ13685 434 aa16.7■□□□□ 0.26
ZKSCAN1-204ENST00000482979 ERICH6BQ5W0A0 696 aa16.7■□□□□ 0.26
ZKSCAN1-204ENST00000482979 CST9Q5W186 159 aa16.7■□□□□ 0.26
ZKSCAN1-204ENST00000482979 HIRAP54198 1017 aaPredicted RBP16.69■□□□□ 0.26
ZKSCAN1-204ENST00000482979 GPSM2P81274 684 aa16.69■□□□□ 0.26
ZKSCAN1-204ENST00000482979 TRPM4Q8TD43 1214 aa16.69■□□□□ 0.26
ZKSCAN1-204ENST00000482979 WBP1LQ9NX94 342 aa16.69■□□□□ 0.26
ZKSCAN1-204ENST00000482979 POLLQ9UGP5 575 aa16.69■□□□□ 0.26
ZKSCAN1-204ENST00000482979 NSFL1CQ9UNZ2 370 aaKnown RBP16.69■□□□□ 0.26
ZKSCAN1-204ENST00000482979 WDR33Q9C0J8 1336 aaKnown RBP16.69■□□□□ 0.26
ZKSCAN1-204ENST00000482979 GPR101Q96P66 508 aaPredicted RBP16.68■□□□□ 0.26
ZKSCAN1-204ENST00000482979 SEC31BQ9NQW1 1179 aa16.68■□□□□ 0.26
ZKSCAN1-204ENST00000482979 HDAC5Q9UQL6 1122 aa16.68■□□□□ 0.26
ZKSCAN1-204ENST00000482979 CDHR2Q9BYE9 1310 aa16.68■□□□□ 0.26
ZKSCAN1-204ENST00000482979 THSD7BQ9C0I4 1608 aa16.67■□□□□ 0.26
ZKSCAN1-204ENST00000482979 RIMBP2O15034 1052 aa16.67■□□□□ 0.26
ZKSCAN1-204ENST00000482979 TNIP1Q15025 636 aa16.67■□□□□ 0.26
ZKSCAN1-204ENST00000482979 WASHC4Q2M389 1173 aa16.67■□□□□ 0.26
ZKSCAN1-204ENST00000482979 GLIS2Q9BZE0 524 aaPredicted RBP16.67■□□□□ 0.26
ZKSCAN1-204ENST00000482979 BICC1Q9H694 974 aaKnown RBP16.67■□□□□ 0.26
ZKSCAN1-204ENST00000482979 DBNDD1Q9H9R9 158 aa16.67■□□□□ 0.26
ZKSCAN1-204ENST00000482979 PGAP2Q9UHJ9 254 aa16.67■□□□□ 0.26
ZKSCAN1-204ENST00000482979 ZBTB12Q9Y330 459 aaPredicted RBP16.67■□□□□ 0.26
ZKSCAN1-204ENST00000482979 PCDHB15Q9Y5E8 787 aa16.67■□□□□ 0.26
ZKSCAN1-204ENST00000482979 EPHA10Q5JZY3 1008 aa16.66■□□□□ 0.26
ZKSCAN1-204ENST00000482979 CEP85Q6P2H3 762 aa16.66■□□□□ 0.26
ZKSCAN1-204ENST00000482979 KAZALD1Q96I82 304 aa16.66■□□□□ 0.26
ZKSCAN1-204ENST00000482979 KCNQ5Q9NR82 932 aa16.66■□□□□ 0.26
ZKSCAN1-204ENST00000482979 PPP4R2Q9NY27 417 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms