RNA–Protein interactions for RNA: ENST00000482458.1

STK40-208, Transcript of serine/threonine kinase 40, human

TSL 3

Gene STK40, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STK40-208	ENST00000482458	CFAP44	Q96MT7	982 aa		32.81	■■■□□ 2.84
STK40-208	ENST00000482458	RGS19	P49795	217 aa		32.8	■■■□□ 2.84
STK40-208	ENST00000482458	DCPS	Q96C86	337 aa	Known RBP	32.8	■■■□□ 2.84
STK40-208	ENST00000482458	ADM5	C9JUS6	153 aa		32.79	■■■□□ 2.84
STK40-208	ENST00000482458	GBA2	Q9HCG7	927 aa	Predicted RBP	32.79	■■■□□ 2.84
STK40-208	ENST00000482458	RGMB	Q6NW40	437 aa		32.78	■■■□□ 2.84
STK40-208	ENST00000482458	RIC3	Q7Z5B4	369 aa		32.78	■■■□□ 2.84
STK40-208	ENST00000482458	C2orf69	Q8N8R5	385 aa		32.78	■■■□□ 2.84
STK40-208	ENST00000482458	ZC3H12C	Q9C0D7	883 aa	Known RBP	32.78	■■■□□ 2.84
STK40-208	ENST00000482458	ADAMTS8	Q9UP79	889 aa		32.78	■■■□□ 2.84
STK40-208	ENST00000482458	CASP8AP2	Q9UKL3	1982 aa		32.78	■■■□□ 2.84
STK40-208	ENST00000482458	DGKZ	Q13574	1117 aa		32.77	■■■□□ 2.84
STK40-208	ENST00000482458	MBIP	Q9NS73	344 aa		32.77	■■■□□ 2.84
STK40-208	ENST00000482458	GOLGA2	Q08379	1002 aa		32.76	■■■□□ 2.83
STK40-208	ENST00000482458	DDX10	Q13206	875 aa	Known RBP	32.76	■■■□□ 2.83
STK40-208	ENST00000482458	KIF4B	Q2VIQ3	1234 aa		32.76	■■■□□ 2.83
STK40-208	ENST00000482458	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.76	■■■□□ 2.83
STK40-208	ENST00000482458	FAM155A	B1AL88	458 aa	Predicted RBP	32.75	■■■□□ 2.83
STK40-208	ENST00000482458	SEC31B	Q9NQW1	1179 aa		32.75	■■■□□ 2.83
STK40-208	ENST00000482458	PODXL2	Q9NZ53	605 aa		32.75	■■■□□ 2.83
STK40-208	ENST00000482458		G3V3G9	751 aa		32.74	■■■□□ 2.83
STK40-208	ENST00000482458	UFL1	O94874	794 aa		32.74	■■■□□ 2.83
STK40-208	ENST00000482458	VIL1	P09327	827 aa	Known RBP	32.74	■■■□□ 2.83
STK40-208	ENST00000482458	DCAF8	Q5TAQ9	597 aa		32.74	■■■□□ 2.83
STK40-208	ENST00000482458	HSP90B1	P14625	803 aa	Known RBP	32.73	■■■□□ 2.83
STK40-208	ENST00000482458	CCDC102A	Q96A19	550 aa		32.73	■■■□□ 2.83
STK40-208	ENST00000482458	GGA3	Q9NZ52	723 aa		32.73	■■■□□ 2.83
STK40-208	ENST00000482458	ANKIB1	Q9P2G1	1089 aa		32.73	■■■□□ 2.83
STK40-208	ENST00000482458	ZNF157	P51786	506 aa	Predicted RBP	32.72	■■■□□ 2.83
STK40-208	ENST00000482458	SULF1	Q8IWU6	871 aa		32.72	■■■□□ 2.83
STK40-208	ENST00000482458	PHAX	Q9H814	394 aa	Known RBP	32.72	■■■□□ 2.83
STK40-208	ENST00000482458	GGA1	Q9UJY5	639 aa		32.72	■■■□□ 2.83
STK40-208	ENST00000482458	KIF23	Q02241	960 aa	Predicted RBP	32.71	■■■□□ 2.83
STK40-208	ENST00000482458	MYD88	Q99836	296 aa		32.71	■■■□□ 2.83
STK40-208	ENST00000482458	ASTN2	O75129	1339 aa	Predicted RBP	32.7	■■■□□ 2.82
STK40-208	ENST00000482458	POLR2A	P24928	1970 aa	Known RBP	32.69	■■■□□ 2.82
STK40-208	ENST00000482458	SCN9A	Q15858	1988 aa		32.69	■■■□□ 2.82
STK40-208	ENST00000482458	ZNF853	P0CG23	659 aa		32.69	■■■□□ 2.82
STK40-208	ENST00000482458	CCDC152	Q4G0S7	254 aa		32.69	■■■□□ 2.82
STK40-208	ENST00000482458	ELL2	O00472	640 aa	Predicted RBP	32.68	■■■□□ 2.82
STK40-208	ENST00000482458	SAGE1	Q9NXZ1	904 aa		32.68	■■■□□ 2.82
STK40-208	ENST00000482458	SLC34A2	O95436	690 aa		32.67	■■■□□ 2.82
STK40-208	ENST00000482458	PCCA	P05165	728 aa	Predicted RBP	32.67	■■■□□ 2.82
STK40-208	ENST00000482458	CCDC191	Q8NCU4	936 aa		32.67	■■■□□ 2.82
STK40-208	ENST00000482458	CDCA5	Q96FF9	252 aa		32.67	■■■□□ 2.82
STK40-208	ENST00000482458	CCDC85A	Q96PX6	553 aa	Predicted RBP	32.67	■■■□□ 2.82
STK40-208	ENST00000482458	PDE8A	O60658	829 aa		32.66	■■■□□ 2.82
STK40-208	ENST00000482458	ZNF280A	P59817	542 aa	Predicted RBP	32.66	■■■□□ 2.82
STK40-208	ENST00000482458	RSBN1L	Q6PCB5	846 aa	Predicted RBP	32.66	■■■□□ 2.82
STK40-208	ENST00000482458	JARID2	Q92833	1246 aa	Predicted RBP	32.66	■■■□□ 2.82
STK40-208	ENST00000482458	IFT57	Q9NWB7	429 aa		32.66	■■■□□ 2.82
STK40-208	ENST00000482458	AGBL3	Q8NEM8	1001 aa		32.65	■■■□□ 2.82
STK40-208	ENST00000482458	CWC25	Q9NXE8	425 aa	Predicted RBP	32.65	■■■□□ 2.82
STK40-208	ENST00000482458	SLC10A3	P09131	477 aa		32.64	■■■□□ 2.82
STK40-208	ENST00000482458	ANGEL2	Q5VTE6	544 aa	Known RBP	32.64	■■■□□ 2.82
STK40-208	ENST00000482458	RNF186	Q9NXI6	227 aa		32.64	■■■□□ 2.82
STK40-208	ENST00000482458	ZNF609	O15014	1411 aa		32.63	■■■□□ 2.81
STK40-208	ENST00000482458	TRPA1	O75762	1119 aa		32.63	■■■□□ 2.81
STK40-208	ENST00000482458	GNAI1	P63096	354 aa		32.63	■■■□□ 2.81
STK40-208	ENST00000482458	SCARF1	Q14162	830 aa		32.63	■■■□□ 2.81
STK40-208	ENST00000482458	XDH	P47989	1333 aa		32.62	■■■□□ 2.81
STK40-208	ENST00000482458	ANKRD18A	Q8IVF6	992 aa		32.62	■■■□□ 2.81
STK40-208	ENST00000482458	CALD1	Q05682	793 aa	Known RBP	32.61	■■■□□ 2.81
STK40-208	ENST00000482458	METTL22	Q9BUU2	404 aa	Predicted RBP	32.61	■■■□□ 2.81
STK40-208	ENST00000482458	APAF1	O14727	1248 aa		32.6	■■■□□ 2.81
STK40-208	ENST00000482458	CSRNP1	Q96S65	589 aa		32.6	■■■□□ 2.81
STK40-208	ENST00000482458	GML	Q99445	158 aa		32.6	■■■□□ 2.81
STK40-208	ENST00000482458	DDX58	O95786	925 aa	Known RBP	32.59	■■■□□ 2.81
STK40-208	ENST00000482458	USP17L8	P0C7I0	530 aa		32.59	■■■□□ 2.81
STK40-208	ENST00000482458	ATP2B4	P23634	1241 aa		32.59	■■■□□ 2.81
STK40-208	ENST00000482458	C8orf58	Q8NAV2	365 aa		32.59	■■■□□ 2.81
STK40-208	ENST00000482458	MYOZ2	Q9NPC6	264 aa		32.58	■■■□□ 2.81
STK40-208	ENST00000482458	USP17L3	A6NCW0	530 aa		32.57	■■■□□ 2.8
STK40-208	ENST00000482458	USP17L4	A6NCW7	530 aa		32.57	■■■□□ 2.8
STK40-208	ENST00000482458	USP17L1	Q7RTZ2	530 aa		32.57	■■■□□ 2.8
STK40-208	ENST00000482458	RASAL3	Q86YV0	1011 aa		32.57	■■■□□ 2.8
STK40-208	ENST00000482458	CCDC30	Q5VVM6	783 aa		32.56	■■■□□ 2.8
STK40-208	ENST00000482458	PODN	Q7Z5L7	613 aa		32.56	■■■□□ 2.8
STK40-208	ENST00000482458	FKBP1B	P68106	108 aa		32.55	■■■□□ 2.8
STK40-208	ENST00000482458	CDC5L	Q99459	802 aa	Known RBP	32.55	■■■□□ 2.8
STK40-208	ENST00000482458	MAP3K2	Q9Y2U5	619 aa		32.55	■■■□□ 2.8
STK40-208	ENST00000482458	PITPNM2	Q9BZ72	1349 aa		32.54	■■■□□ 2.8
STK40-208	ENST00000482458	CTSW	P56202	376 aa		32.54	■■■□□ 2.8
STK40-208	ENST00000482458	REM2	Q8IYK8	340 aa	Predicted RBP	32.54	■■■□□ 2.8
STK40-208	ENST00000482458	PSME4	Q14997	1843 aa		32.54	■■■□□ 2.8
STK40-208	ENST00000482458	CHMP4A	Q9BY43	222 aa		32.53	■■■□□ 2.8
STK40-208	ENST00000482458	WTIP	A6NIX2	430 aa	Predicted RBP	32.52	■■■□□ 2.8
STK40-208	ENST00000482458	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.52	■■■□□ 2.8
STK40-208	ENST00000482458	SCAF8	Q9UPN6	1271 aa	Known RBP	32.52	■■■□□ 2.8
STK40-208	ENST00000482458	AKAP11	Q9UKA4	1901 aa		32.51	■■■□□ 2.8
STK40-208	ENST00000482458	PAPPA2	Q9BXP8	1791 aa		32.51	■■■□□ 2.79
STK40-208	ENST00000482458	MED23	Q9ULK4	1368 aa		32.5	■■■□□ 2.79
STK40-208	ENST00000482458	IGKV5-2	P06315	115 aa		32.5	■■■□□ 2.79
STK40-208	ENST00000482458	KSR2	Q6VAB6	950 aa		32.5	■■■□□ 2.79
STK40-208	ENST00000482458	MOB2	Q70IA6	237 aa		32.5	■■■□□ 2.79
STK40-208	ENST00000482458	TTLL11	Q8NHH1	800 aa		32.5	■■■□□ 2.79
STK40-208	ENST00000482458	MINPP1	Q9UNW1	487 aa		32.5	■■■□□ 2.79
STK40-208	ENST00000482458	PI4KAP2	A4QPH2	592 aa		32.49	■■■□□ 2.79
STK40-208	ENST00000482458	SOX10	P56693	466 aa		32.49	■■■□□ 2.79
STK40-208	ENST00000482458	CTU1	Q7Z7A3	348 aa	Known RBP	32.49	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms