RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 POTEJP0CG39 1038 aa15.06■□□□□ 0
HMGN1-213ENST00000482192 ITGA6P23229 1130 aa15.06■□□□□ 0
HMGN1-213ENST00000482192 SCNN1DP51172 638 aa15.06■□□□□ 0
HMGN1-213ENST00000482192 TNIP1Q15025 636 aa15.06■□□□□ 0
HMGN1-213ENST00000482192 FAM161AQ3B820 660 aa15.06■□□□□ 0
HMGN1-213ENST00000482192 EAPPQ56P03 285 aaPredicted RBP15.06■□□□□ 0
HMGN1-213ENST00000482192 CIAPIN1Q6FI81 312 aa15.06■□□□□ 0
HMGN1-213ENST00000482192 BSDC1Q9NW68 430 aaPredicted RBP15.06■□□□□ 0
HMGN1-213ENST00000482192 GGA1Q9UJY5 639 aa15.06■□□□□ 0
HMGN1-213ENST00000482192 IGHMBP2P38935 993 aaKnown RBP15.05■□□□□ -0
HMGN1-213ENST00000482192 BCL2L13Q9BXK5 485 aa15.05■□□□□ -0
HMGN1-213ENST00000482192 ZC3H12CQ9C0D7 883 aaKnown RBP15.05■□□□□ -0
HMGN1-213ENST00000482192 SMC4Q9NTJ3 1288 aa15.05■□□□□ -0
HMGN1-213ENST00000482192 C9orf78Q9NZ63 289 aaPredicted RBP15.05■□□□□ -0
HMGN1-213ENST00000482192 YDJCA8MPS7 323 aa15.04■□□□□ -0
HMGN1-213ENST00000482192 RAD17O75943 681 aa15.04■□□□□ -0
HMGN1-213ENST00000482192 ATP2B4P23634 1241 aa15.04■□□□□ -0
HMGN1-213ENST00000482192 FOXO4P98177 505 aa15.04■□□□□ -0
HMGN1-213ENST00000482192 GPR101Q96P66 508 aaPredicted RBP15.04■□□□□ -0
HMGN1-213ENST00000482192 DBNDD1Q9H9R9 158 aa15.04■□□□□ -0
HMGN1-213ENST00000482192 GPRC5DQ9NZD1 345 aa15.04■□□□□ -0
HMGN1-213ENST00000482192 ADAMTSL1Q8N6G6 1762 aa15.03■□□□□ -0
HMGN1-213ENST00000482192 ANKRD18BA2A2Z9 1011 aa15.03■□□□□ -0
HMGN1-213ENST00000482192 ECE2O60344 883 aa15.03■□□□□ -0
HMGN1-213ENST00000482192 EPS15P42566 896 aa15.03■□□□□ -0
HMGN1-213ENST00000482192 GMPSP49915 693 aaPredicted RBP15.03■□□□□ -0
HMGN1-213ENST00000482192 MPHOSPH8Q99549 860 aa15.03■□□□□ -0
HMGN1-213ENST00000482192 MINPP1Q9UNW1 487 aa15.03■□□□□ -0
HMGN1-213ENST00000482192 CLEC11AQ9Y240 323 aa15.03■□□□□ -0
HMGN1-213ENST00000482192 G3V3G9 751 aa15.02■□□□□ -0
HMGN1-213ENST00000482192 IFIT5Q13325 482 aaKnown RBP15.02■□□□□ -0
HMGN1-213ENST00000482192 DOK7Q18PE1 504 aa15.02■□□□□ -0
HMGN1-213ENST00000482192 DCAF8Q5TAQ9 597 aa15.02■□□□□ -0
HMGN1-213ENST00000482192 USP50Q70EL3 339 aaPredicted RBP15.02■□□□□ -0
HMGN1-213ENST00000482192 CHMP3Q9Y3E7 222 aa15.02■□□□□ -0
HMGN1-213ENST00000482192 MED23Q9ULK4 1368 aa15.01□□□□□ -0.01
HMGN1-213ENST00000482192 UTYO14607 1347 aa15.01□□□□□ -0.01
HMGN1-213ENST00000482192 LMBR1LQ6UX01 489 aa15.01□□□□□ -0.01
HMGN1-213ENST00000482192 ANKRD2Q9GZV1 360 aa15.01□□□□□ -0.01
HMGN1-213ENST00000482192 ADARB2Q9NS39 739 aaKnown RBP15.01□□□□□ -0.01
HMGN1-213ENST00000482192 NBPF7P0C2Y1 421 aaPredicted RBP15□□□□□ -0.01
HMGN1-213ENST00000482192 CCT4P50991 539 aaKnown RBP15□□□□□ -0.01
HMGN1-213ENST00000482192 HTRA3P83110 453 aa15□□□□□ -0.01
HMGN1-213ENST00000482192 HNRNPUQ00839 825 aaKnown RBP eCLIP15□□□□□ -0.01
HMGN1-213ENST00000482192 CCDC57Q2TAC2 916 aa15□□□□□ -0.01
HMGN1-213ENST00000482192 EPHA10Q5JZY3 1008 aa15□□□□□ -0.01
HMGN1-213ENST00000482192 LEMD3Q9Y2U8 911 aa15□□□□□ -0.01
HMGN1-213ENST00000482192 SPEF2Q9C093 1822 aa15□□□□□ -0.01
HMGN1-213ENST00000482192 PASKQ96RG2 1323 aa14.99□□□□□ -0.01
HMGN1-213ENST00000482192 PSMD14O00487 310 aa14.99□□□□□ -0.01
HMGN1-213ENST00000482192 RPS12P25398 132 aaKnown RBP14.99□□□□□ -0.01
HMGN1-213ENST00000482192 BRPF1P55201 1214 aaPredicted RBP14.99□□□□□ -0.01
HMGN1-213ENST00000482192 MAP1SQ66K74 1059 aaPredicted RBP14.99□□□□□ -0.01
HMGN1-213ENST00000482192 CNTROBQ8N137 903 aa14.99□□□□□ -0.01
HMGN1-213ENST00000482192 DNAJC5GQ8N7S2 189 aa14.99□□□□□ -0.01
HMGN1-213ENST00000482192 DPF2Q92785 391 aa14.99□□□□□ -0.01
HMGN1-213ENST00000482192 ZNF804BA4D1E1 1349 aa14.98□□□□□ -0.01
HMGN1-213ENST00000482192 H7C1D1 291 aa14.98□□□□□ -0.01
HMGN1-213ENST00000482192 ITGBL1O95965 494 aaPredicted RBP14.98□□□□□ -0.01
HMGN1-213ENST00000482192 CHRNDQ07001 517 aa14.98□□□□□ -0.01
HMGN1-213ENST00000482192 TAF7LQ5H9L4 462 aa14.98□□□□□ -0.01
HMGN1-213ENST00000482192 PODNQ7Z5L7 613 aa14.98□□□□□ -0.01
HMGN1-213ENST00000482192 MICALL2Q8IY33 904 aa14.98□□□□□ -0.01
HMGN1-213ENST00000482192 SUCLG2Q96I99 432 aa14.98□□□□□ -0.01
HMGN1-213ENST00000482192 KCNQ5Q9NR82 932 aa14.98□□□□□ -0.01
HMGN1-213ENST00000482192 CNOT7Q9UIV1 285 aaKnown RBP14.98□□□□□ -0.01
HMGN1-213ENST00000482192 NOB1Q9ULX3 412 aaKnown RBP14.98□□□□□ -0.01
HMGN1-213ENST00000482192 ZBTB12Q9Y330 459 aaPredicted RBP14.98□□□□□ -0.01
HMGN1-213ENST00000482192 KIF16BQ96L93 1317 aa14.97□□□□□ -0.01
HMGN1-213ENST00000482192 WTIPA6NIX2 430 aaPredicted RBP14.97□□□□□ -0.01
HMGN1-213ENST00000482192 KCNJ4P48050 445 aa14.97□□□□□ -0.01
HMGN1-213ENST00000482192 RARSP54136 660 aaKnown RBP14.97□□□□□ -0.01
HMGN1-213ENST00000482192 KLRG1Q96E93 195 aa14.97□□□□□ -0.01
HMGN1-213ENST00000482192 KAZALD1Q96I82 304 aa14.97□□□□□ -0.01
HMGN1-213ENST00000482192 API5Q9BZZ5 524 aaKnown RBP14.97□□□□□ -0.01
HMGN1-213ENST00000482192 CREBZFQ9NS37 354 aa14.97□□□□□ -0.01
HMGN1-213ENST00000482192 ZNF609O15014 1411 aa14.96□□□□□ -0.01
HMGN1-213ENST00000482192 VIL1P09327 827 aaKnown RBP14.96□□□□□ -0.01
HMGN1-213ENST00000482192 RABL6Q3YEC7 729 aaPredicted RBP14.96□□□□□ -0.01
HMGN1-213ENST00000482192 LDHAL6AQ6ZMR3 332 aa14.96□□□□□ -0.01
HMGN1-213ENST00000482192 COA1Q9GZY4 146 aa14.96□□□□□ -0.01
HMGN1-213ENST00000482192 USP44Q9H0E7 712 aa14.96□□□□□ -0.01
HMGN1-213ENST00000482192 BICC1Q9H694 974 aaKnown RBP14.96□□□□□ -0.01
HMGN1-213ENST00000482192 ZC3H15Q8WU90 426 aaKnown RBP14.95□□□□□ -0.02
HMGN1-213ENST00000482192 ARHGAP45Q92619 1136 aa14.95□□□□□ -0.02
HMGN1-213ENST00000482192 ZNF594Q96JF6 807 aaPredicted RBP14.95□□□□□ -0.02
HMGN1-213ENST00000482192 CNNM1Q9NRU3 951 aa14.95□□□□□ -0.02
HMGN1-213ENST00000482192 SHTN1A0MZ66 631 aa14.94□□□□□ -0.02
HMGN1-213ENST00000482192 USP17L3A6NCW0 530 aa14.94□□□□□ -0.02
HMGN1-213ENST00000482192 USP17L4A6NCW7 530 aa14.94□□□□□ -0.02
HMGN1-213ENST00000482192 TMEM88BA6NKF7 163 aa14.94□□□□□ -0.02
HMGN1-213ENST00000482192 RSBN1LQ6PCB5 846 aaPredicted RBP14.94□□□□□ -0.02
HMGN1-213ENST00000482192 USP17L1Q7RTZ2 530 aa14.94□□□□□ -0.02
HMGN1-213ENST00000482192 TXNRD3Q86VQ6 643 aa14.94□□□□□ -0.02
HMGN1-213ENST00000482192 ANKRD44Q8N8A2 993 aa14.94□□□□□ -0.02
HMGN1-213ENST00000482192 AGBL3Q8NEM8 1001 aa14.94□□□□□ -0.02
HMGN1-213ENST00000482192 TRPM4Q8TD43 1214 aa14.94□□□□□ -0.02
HMGN1-213ENST00000482192 PGAP2Q9UHJ9 254 aa14.94□□□□□ -0.02
HMGN1-213ENST00000482192 TAF5LO75529 589 aa14.93□□□□□ -0.02
HMGN1-213ENST00000482192 KLRK1P26718 216 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms