RNA–Protein interactions for RNA: ENST00000482143.5

TSPAN1-207, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 827 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-207ENST00000482143 ZNF296Q8WUU4 475 aaPredicted RBP16.87■□□□□ 0.29
TSPAN1-207ENST00000482143 TSPYL4Q9UJ04 414 aa16.87■□□□□ 0.29
TSPAN1-207ENST00000482143 SCN9AQ15858 1988 aa16.87■□□□□ 0.29
TSPAN1-207ENST00000482143 ZNF428Q96B54 188 aa16.86■□□□□ 0.29
TSPAN1-207ENST00000482143 KCNQ5Q9NR82 932 aa16.86■□□□□ 0.29
TSPAN1-207ENST00000482143 PSME4Q14997 1843 aa16.85■□□□□ 0.29
TSPAN1-207ENST00000482143 TMPOP42166 694 aaKnown RBP16.85■□□□□ 0.29
TSPAN1-207ENST00000482143 FKBP1BP68106 108 aa16.85■□□□□ 0.29
TSPAN1-207ENST00000482143 TTLL12Q14166 644 aaPredicted RBP16.85■□□□□ 0.29
TSPAN1-207ENST00000482143 ANGEL2Q5VTE6 544 aaKnown RBP16.85■□□□□ 0.29
TSPAN1-207ENST00000482143 ASTN2O75129 1339 aaPredicted RBP16.85■□□□□ 0.29
TSPAN1-207ENST00000482143 RTL9Q8NET4 1388 aa16.85■□□□□ 0.29
TSPAN1-207ENST00000482143 RIPK4P57078 832 aa16.84■□□□□ 0.29
TSPAN1-207ENST00000482143 GPSM2P81274 684 aa16.84■□□□□ 0.29
TSPAN1-207ENST00000482143 RALBP1Q15311 655 aa16.84■□□□□ 0.29
TSPAN1-207ENST00000482143 FBXO46Q6PJ61 603 aaPredicted RBP16.84■□□□□ 0.29
TSPAN1-207ENST00000482143 COPS6Q7L5N1 327 aa16.84■□□□□ 0.29
TSPAN1-207ENST00000482143 NECTIN2Q92692 538 aa16.84■□□□□ 0.29
TSPAN1-207ENST00000482143 ZC3H12CQ9C0D7 883 aaKnown RBP16.84■□□□□ 0.29
TSPAN1-207ENST00000482143 POLLQ9UGP5 575 aa16.84■□□□□ 0.29
TSPAN1-207ENST00000482143 TCIRG1Q13488 830 aa16.83■□□□□ 0.28
TSPAN1-207ENST00000482143 SCARF1Q14162 830 aa16.83■□□□□ 0.28
TSPAN1-207ENST00000482143 XAGE3Q8WTP9 111 aa16.83■□□□□ 0.28
TSPAN1-207ENST00000482143 CELF1Q92879 486 aaKnown RBP16.83■□□□□ 0.28
TSPAN1-207ENST00000482143 HABP4Q5JVS0 413 aaKnown RBP16.82■□□□□ 0.28
TSPAN1-207ENST00000482143 GPR25O00155 361 aa16.81■□□□□ 0.28
TSPAN1-207ENST00000482143 CHL1O00533 1208 aa16.81■□□□□ 0.28
TSPAN1-207ENST00000482143 VIL1P09327 827 aaKnown RBP16.81■□□□□ 0.28
TSPAN1-207ENST00000482143 MKRN3Q13064 507 aaKnown RBP16.81■□□□□ 0.28
TSPAN1-207ENST00000482143 TBC1D16Q8TBP0 767 aa16.81■□□□□ 0.28
TSPAN1-207ENST00000482143 ANKIB1Q9P2G1 1089 aa16.81■□□□□ 0.28
TSPAN1-207ENST00000482143 COL4A1P02462 1669 aa16.81■□□□□ 0.28
TSPAN1-207ENST00000482143 UBE2Q2LH0YL09 131 aa16.8■□□□□ 0.28
TSPAN1-207ENST00000482143 FKTNO75072 461 aa16.8■□□□□ 0.28
TSPAN1-207ENST00000482143 UFL1O94874 794 aa16.8■□□□□ 0.28
TSPAN1-207ENST00000482143 NF2P35240 595 aa16.8■□□□□ 0.28
TSPAN1-207ENST00000482143 LMOD3Q0VAK6 560 aa16.8■□□□□ 0.28
TSPAN1-207ENST00000482143 SREBF2Q12772 1141 aa16.8■□□□□ 0.28
TSPAN1-207ENST00000482143 RTL5Q5HYW3 569 aaPredicted RBP16.8■□□□□ 0.28
TSPAN1-207ENST00000482143 MOB2Q70IA6 237 aa16.8■□□□□ 0.28
TSPAN1-207ENST00000482143 TRIM35Q9UPQ4 493 aa16.8■□□□□ 0.28
TSPAN1-207ENST00000482143 RSBN1LQ6PCB5 846 aaPredicted RBP16.79■□□□□ 0.28
TSPAN1-207ENST00000482143 AGBL3Q8NEM8 1001 aa16.79■□□□□ 0.28
TSPAN1-207ENST00000482143 FAM89AQ96GI7 184 aa16.79■□□□□ 0.28
TSPAN1-207ENST00000482143 MYOZ2Q9NPC6 264 aa16.79■□□□□ 0.28
TSPAN1-207ENST00000482143 PITPNM2Q9BZ72 1349 aa16.78■□□□□ 0.28
TSPAN1-207ENST00000482143 USP17L8P0C7I0 530 aa16.78■□□□□ 0.28
TSPAN1-207ENST00000482143 KRT24Q2M2I5 525 aa16.78■□□□□ 0.28
TSPAN1-207ENST00000482143 SCAF8Q9UPN6 1271 aaKnown RBP16.78■□□□□ 0.28
TSPAN1-207ENST00000482143 RBBP6Q7Z6E9 1792 aaKnown RBP16.78■□□□□ 0.28
TSPAN1-207ENST00000482143 MYBBP1AQ9BQG0 1328 aaKnown RBP16.77■□□□□ 0.28
TSPAN1-207ENST00000482143 TM4SF4P48230 202 aa16.77■□□□□ 0.28
TSPAN1-207ENST00000482143 ZNF280AP59817 542 aaPredicted RBP16.77■□□□□ 0.28
TSPAN1-207ENST00000482143 RPS8P62241 208 aaKnown RBP16.77■□□□□ 0.28
TSPAN1-207ENST00000482143 SF3B3Q15393 1217 aaKnown RBP16.77■□□□□ 0.28
TSPAN1-207ENST00000482143 NOM1Q5C9Z4 860 aaKnown RBP16.77■□□□□ 0.28
TSPAN1-207ENST00000482143 GGA1Q9UJY5 639 aa16.77■□□□□ 0.28
TSPAN1-207ENST00000482143 PRAMEF18Q5VWM3 479 aa16.76■□□□□ 0.27
TSPAN1-207ENST00000482143 SPEF2Q9C093 1822 aa16.75■□□□□ 0.27
TSPAN1-207ENST00000482143 ATP5J2-PTCD1G3V325 749 aa16.75■□□□□ 0.27
TSPAN1-207ENST00000482143 HOXB7P09629 217 aa16.75■□□□□ 0.27
TSPAN1-207ENST00000482143 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.75■□□□□ 0.27
TSPAN1-207ENST00000482143 TRIM17Q9Y577 477 aa16.75■□□□□ 0.27
TSPAN1-207ENST00000482143 ZNF609O15014 1411 aa16.74■□□□□ 0.27
TSPAN1-207ENST00000482143 IRS4O14654 1257 aaPredicted RBP16.74■□□□□ 0.27
TSPAN1-207ENST00000482143 PRKG1Q13976 671 aa16.74■□□□□ 0.27
TSPAN1-207ENST00000482143 INTS3Q68E01 1043 aaKnown RBP16.74■□□□□ 0.27
TSPAN1-207ENST00000482143 CCDC146Q8IYE0 955 aa16.74■□□□□ 0.27
TSPAN1-207ENST00000482143 PLBD2Q8NHP8 589 aa16.74■□□□□ 0.27
TSPAN1-207ENST00000482143 RUNDC1Q96C34 613 aa16.74■□□□□ 0.27
TSPAN1-207ENST00000482143 ISCA1Q9BUE6 129 aa16.74■□□□□ 0.27
TSPAN1-207ENST00000482143 CHPF2Q9P2E5 772 aa16.74■□□□□ 0.27
TSPAN1-207ENST00000482143 USP17L3A6NCW0 530 aa16.73■□□□□ 0.27
TSPAN1-207ENST00000482143 USP17L4A6NCW7 530 aa16.73■□□□□ 0.27
TSPAN1-207ENST00000482143 ALDH1A1P00352 501 aa16.73■□□□□ 0.27
TSPAN1-207ENST00000482143 USP17L1Q7RTZ2 530 aa16.73■□□□□ 0.27
TSPAN1-207ENST00000482143 ARMC9Q7Z3E5 817 aa16.73■□□□□ 0.27
TSPAN1-207ENST00000482143 OGFOD1Q8N543 542 aa16.73■□□□□ 0.27
TSPAN1-207ENST00000482143 FBXW7Q969H0 707 aa16.73■□□□□ 0.27
TSPAN1-207ENST00000482143 PODXL2Q9NZ53 605 aa16.73■□□□□ 0.27
TSPAN1-207ENST00000482143 POTEFA5A3E0 1075 aa16.72■□□□□ 0.27
TSPAN1-207ENST00000482143 HSP90B1P14625 803 aaKnown RBP16.72■□□□□ 0.27
TSPAN1-207ENST00000482143 NBPF9Q3BBW0 867 aa16.72■□□□□ 0.27
TSPAN1-207ENST00000482143 ANKRD13DQ6ZTN6 518 aa16.72■□□□□ 0.27
TSPAN1-207ENST00000482143 NEUROD2Q15784 382 aa16.71■□□□□ 0.27
TSPAN1-207ENST00000482143 SEC31BQ9NQW1 1179 aa16.71■□□□□ 0.27
TSPAN1-207ENST00000482143 ADAMTS8Q9UP79 889 aa16.71■□□□□ 0.27
TSPAN1-207ENST00000482143 XDHP47989 1333 aa16.7■□□□□ 0.26
TSPAN1-207ENST00000482143 MYH3P11055 1940 aa16.7■□□□□ 0.26
TSPAN1-207ENST00000482143 ZNF853P0CG23 659 aa16.7■□□□□ 0.26
TSPAN1-207ENST00000482143 DDX10Q13206 875 aaKnown RBP16.7■□□□□ 0.26
TSPAN1-207ENST00000482143 TRIM28Q13263 835 aaKnown RBP16.7■□□□□ 0.26
TSPAN1-207ENST00000482143 HDGFL1Q5TGJ6 251 aa16.7■□□□□ 0.26
TSPAN1-207ENST00000482143 CFHR5Q9BXR6 569 aa16.7■□□□□ 0.26
TSPAN1-207ENST00000482143 R3HDMLQ9H3Y0 253 aa16.7■□□□□ 0.26
TSPAN1-207ENST00000482143 DBF4Q9UBU7 674 aaPredicted RBP16.7■□□□□ 0.26
TSPAN1-207ENST00000482143 LAS1LQ9Y4W2 734 aaKnown RBP16.7■□□□□ 0.26
TSPAN1-207ENST00000482143 ZNF646O15015 1829 aaPredicted RBP16.69■□□□□ 0.26
TSPAN1-207ENST00000482143 FXR1P51114 621 aaKnown RBP eCLIP16.69■□□□□ 0.26
TSPAN1-207ENST00000482143 PTPN12Q05209 780 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms