RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 CACNA1FO60840 1977 aa14.93□□□□□ -0.02
GARNL3-217ENST00000481875 SCN9AQ15858 1988 aa14.93□□□□□ -0.02
GARNL3-217ENST00000481875 APAF1O14727 1248 aa14.92□□□□□ -0.02
GARNL3-217ENST00000481875 CA12O43570 354 aa14.92□□□□□ -0.02
GARNL3-217ENST00000481875 PCCAP05165 728 aaPredicted RBP14.92□□□□□ -0.02
GARNL3-217ENST00000481875 GOLGA2Q08379 1002 aa14.92□□□□□ -0.02
GARNL3-217ENST00000481875 EYA3Q99504 573 aa14.92□□□□□ -0.02
GARNL3-217ENST00000481875 COL4A1P02462 1669 aa14.92□□□□□ -0.02
GARNL3-217ENST00000481875 CELF2O95319 508 aaKnown RBP14.91□□□□□ -0.02
GARNL3-217ENST00000481875 GPSM2P81274 684 aa14.91□□□□□ -0.02
GARNL3-217ENST00000481875 CYP4F22Q6NT55 531 aa14.91□□□□□ -0.02
GARNL3-217ENST00000481875 RIC3Q7Z5B4 369 aa14.91□□□□□ -0.02
GARNL3-217ENST00000481875 MICALL2Q8IY33 904 aa14.91□□□□□ -0.02
GARNL3-217ENST00000481875 FAM9BQ8IZU0 186 aa14.91□□□□□ -0.02
GARNL3-217ENST00000481875 TBC1D16Q8TBP0 767 aa14.91□□□□□ -0.02
GARNL3-217ENST00000481875 TRPM4Q8TD43 1214 aa14.91□□□□□ -0.02
GARNL3-217ENST00000481875 GLIS2Q9BZE0 524 aaPredicted RBP14.91□□□□□ -0.02
GARNL3-217ENST00000481875 SPINK5Q9NQ38 1064 aaPredicted RBP14.91□□□□□ -0.02
GARNL3-217ENST00000481875 MYH3P11055 1940 aa14.9□□□□□ -0.02
GARNL3-217ENST00000481875 PSMD14O00487 310 aa14.9□□□□□ -0.02
GARNL3-217ENST00000481875 PDE8AO60658 829 aa14.9□□□□□ -0.02
GARNL3-217ENST00000481875 VIL1P09327 827 aaKnown RBP14.9□□□□□ -0.02
GARNL3-217ENST00000481875 BRPF1P55201 1214 aaPredicted RBP14.9□□□□□ -0.02
GARNL3-217ENST00000481875 BEGAINQ9BUH8 593 aa14.9□□□□□ -0.02
GARNL3-217ENST00000481875 METTL22Q9BUU2 404 aaPredicted RBP14.9□□□□□ -0.02
GARNL3-217ENST00000481875 PHAXQ9H814 394 aaKnown RBP14.9□□□□□ -0.02
GARNL3-217ENST00000481875 RTL9Q8NET4 1388 aa14.89□□□□□ -0.03
GARNL3-217ENST00000481875 DDX58O95786 925 aaKnown RBP14.89□□□□□ -0.03
GARNL3-217ENST00000481875 CCDC27Q2M243 656 aa14.89□□□□□ -0.03
GARNL3-217ENST00000481875 CCDC152Q4G0S7 254 aa14.89□□□□□ -0.03
GARNL3-217ENST00000481875 CCDC30Q5VVM6 783 aa14.89□□□□□ -0.03
GARNL3-217ENST00000481875 C8orf58Q8NAV2 365 aa14.89□□□□□ -0.03
GARNL3-217ENST00000481875 C6orf229H3BNL8 230 aa14.88□□□□□ -0.03
GARNL3-217ENST00000481875 ECE2O60344 883 aa14.88□□□□□ -0.03
GARNL3-217ENST00000481875 ZC3H12CQ9C0D7 883 aaKnown RBP14.88□□□□□ -0.03
GARNL3-217ENST00000481875 DBNDD1Q9H9R9 158 aa14.88□□□□□ -0.03
GARNL3-217ENST00000481875 CWC25Q9NXE8 425 aaPredicted RBP14.88□□□□□ -0.03
GARNL3-217ENST00000481875 ZBTB12Q9Y330 459 aaPredicted RBP14.88□□□□□ -0.03
GARNL3-217ENST00000481875 SHTN1A0MZ66 631 aa14.87□□□□□ -0.03
GARNL3-217ENST00000481875 NOGQ13253 232 aa14.87□□□□□ -0.03
GARNL3-217ENST00000481875 SAMD7Q7Z3H4 446 aa14.87□□□□□ -0.03
GARNL3-217ENST00000481875 AGBL3Q8NEM8 1001 aa14.87□□□□□ -0.03
GARNL3-217ENST00000481875 SEC31BQ9NQW1 1179 aa14.87□□□□□ -0.03
GARNL3-217ENST00000481875 CASP8AP2Q9UKL3 1982 aa14.86□□□□□ -0.03
GARNL3-217ENST00000481875 RIMBP2O15034 1052 aa14.86□□□□□ -0.03
GARNL3-217ENST00000481875 ZNF280AP59817 542 aaPredicted RBP14.86□□□□□ -0.03
GARNL3-217ENST00000481875 RTL5Q5HYW3 569 aaPredicted RBP14.86□□□□□ -0.03
GARNL3-217ENST00000481875 KSR2Q6VAB6 950 aa14.86□□□□□ -0.03
GARNL3-217ENST00000481875 ABHD8Q96I13 439 aa14.86□□□□□ -0.03
GARNL3-217ENST00000481875 MYD88Q99836 296 aa14.86□□□□□ -0.03
GARNL3-217ENST00000481875 KCNQ5Q9NR82 932 aa14.86□□□□□ -0.03
GARNL3-217ENST00000481875 GGA1Q9UJY5 639 aa14.86□□□□□ -0.03
GARNL3-217ENST00000481875 ELL2O00472 640 aaPredicted RBP14.85□□□□□ -0.03
GARNL3-217ENST00000481875 AOC2O75106 756 aa14.85□□□□□ -0.03
GARNL3-217ENST00000481875 EGFRP00533 1210 aa14.85□□□□□ -0.03
GARNL3-217ENST00000481875 PAXIP1Q6ZW49 1069 aaPredicted RBP14.85□□□□□ -0.03
GARNL3-217ENST00000481875 KRT26Q7Z3Y9 468 aa14.85□□□□□ -0.03
GARNL3-217ENST00000481875 PODNQ7Z5L7 613 aa14.85□□□□□ -0.03
GARNL3-217ENST00000481875 USP48Q86UV5 1035 aa14.85□□□□□ -0.03
GARNL3-217ENST00000481875 ZNF428Q96B54 188 aa14.85□□□□□ -0.03
GARNL3-217ENST00000481875 GMLQ99445 158 aa14.85□□□□□ -0.03
GARNL3-217ENST00000481875 ANKIB1Q9P2G1 1089 aa14.85□□□□□ -0.03
GARNL3-217ENST00000481875 XDHP47989 1333 aa14.85□□□□□ -0.03
GARNL3-217ENST00000481875 IGKV5-2P06315 115 aa14.84□□□□□ -0.03
GARNL3-217ENST00000481875 MMP14P50281 582 aa14.84□□□□□ -0.03
GARNL3-217ENST00000481875 POLA2Q14181 598 aa14.84□□□□□ -0.03
GARNL3-217ENST00000481875 DOK7Q18PE1 504 aa14.84□□□□□ -0.03
GARNL3-217ENST00000481875 DCPSQ96C86 337 aaKnown RBP14.84□□□□□ -0.03
GARNL3-217ENST00000481875 BSDC1Q9NW68 430 aaPredicted RBP14.84□□□□□ -0.03
GARNL3-217ENST00000481875 MAP3K2Q9Y2U5 619 aa14.84□□□□□ -0.03
GARNL3-217ENST00000481875 IL16Q14005 1332 aa14.84□□□□□ -0.03
GARNL3-217ENST00000481875 FAM155AB1AL88 458 aaPredicted RBP14.83□□□□□ -0.04
GARNL3-217ENST00000481875 UFL1O94874 794 aa14.83□□□□□ -0.04
GARNL3-217ENST00000481875 ATP2B4P23634 1241 aa14.83□□□□□ -0.04
GARNL3-217ENST00000481875 RGS19P49795 217 aa14.83□□□□□ -0.04
GARNL3-217ENST00000481875 HUNKP57058 714 aa14.83□□□□□ -0.04
GARNL3-217ENST00000481875 TBC1D10BQ4KMP7 808 aaPredicted RBP14.83□□□□□ -0.04
GARNL3-217ENST00000481875 RSBN1LQ6PCB5 846 aaPredicted RBP14.83□□□□□ -0.04
GARNL3-217ENST00000481875 ANKRD18AQ8IVF6 992 aa14.83□□□□□ -0.04
GARNL3-217ENST00000481875 TSPYL6Q8N831 410 aa14.83□□□□□ -0.04
GARNL3-217ENST00000481875 TTLL11Q8NHH1 800 aa14.83□□□□□ -0.04
GARNL3-217ENST00000481875 CCDC102AQ96A19 550 aa14.83□□□□□ -0.04
GARNL3-217ENST00000481875 CDC5LQ99459 802 aaKnown RBP14.83□□□□□ -0.04
GARNL3-217ENST00000481875 AKAP11Q9UKA4 1901 aa14.83□□□□□ -0.04
GARNL3-217ENST00000481875 PI4KAP2A4QPH2 592 aa14.82□□□□□ -0.04
GARNL3-217ENST00000481875 CTSWP56202 376 aa14.82□□□□□ -0.04
GARNL3-217ENST00000481875 KIF4BQ2VIQ3 1234 aa14.82□□□□□ -0.04
GARNL3-217ENST00000481875 RGMBQ6NW40 437 aa14.82□□□□□ -0.04
GARNL3-217ENST00000481875 WWC1Q8IX03 1113 aa14.82□□□□□ -0.04
GARNL3-217ENST00000481875 PI4KAP1Q8N8J0 262 aa14.82□□□□□ -0.04
GARNL3-217ENST00000481875 C2orf69Q8N8R5 385 aa14.82□□□□□ -0.04
GARNL3-217ENST00000481875 PLA2G12BQ9BX93 195 aa14.82□□□□□ -0.04
GARNL3-217ENST00000481875 GBA2Q9HCG7 927 aaPredicted RBP14.82□□□□□ -0.04
GARNL3-217ENST00000481875 PITPNM2Q9BZ72 1349 aa14.82□□□□□ -0.04
GARNL3-217ENST00000481875 ZNF646O15015 1829 aaPredicted RBP14.82□□□□□ -0.04
GARNL3-217ENST00000481875 H7C1W4 665 aa14.81□□□□□ -0.04
GARNL3-217ENST00000481875 FKBP1BP68106 108 aa14.81□□□□□ -0.04
GARNL3-217ENST00000481875 NEXNQ0ZGT2 675 aa14.81□□□□□ -0.04
GARNL3-217ENST00000481875 GRM1Q13255 1194 aa14.81□□□□□ -0.04
GARNL3-217ENST00000481875 SULF1Q8IWU6 871 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms