RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 IL15P40933 162 aaPredicted RBP25.7■■□□□ 1.7
VPS16-207ENST00000481812 G3BP1Q13283 466 aaKnown RBP eCLIP25.7■■□□□ 1.7
VPS16-207ENST00000481812 SOGA3Q5TF21 947 aa25.7■■□□□ 1.7
VPS16-207ENST00000481812 ATG9AQ7Z3C6 839 aa25.7■■□□□ 1.7
VPS16-207ENST00000481812 PUS3Q9BZE2 481 aaKnown RBP25.7■■□□□ 1.7
VPS16-207ENST00000481812 TMX4Q9H1E5 349 aaPredicted RBP25.7■■□□□ 1.7
VPS16-207ENST00000481812 MINPP1Q9UNW1 487 aa25.7■■□□□ 1.7
VPS16-207ENST00000481812 SRCAPQ6ZRS2 3230 aa25.69■■□□□ 1.7
VPS16-207ENST00000481812 MROH5Q6ZUA9 1318 aa25.69■■□□□ 1.7
VPS16-207ENST00000481812 LRRC24Q50LG9 513 aa25.69■■□□□ 1.7
VPS16-207ENST00000481812 A0A1B0GUL6 1792 aa25.69■■□□□ 1.7
VPS16-207ENST00000481812 ANKRD2Q9GZV1 360 aa25.68■■□□□ 1.7
VPS16-207ENST00000481812 SIL1Q9H173 461 aa25.68■■□□□ 1.7
VPS16-207ENST00000481812 RAB11FIP3O75154 756 aa25.67■■□□□ 1.7
VPS16-207ENST00000481812 ERC1Q8IUD2 1116 aa25.67■■□□□ 1.7
VPS16-207ENST00000481812 PODXL2Q9NZ53 605 aa25.67■■□□□ 1.7
VPS16-207ENST00000481812 CHRNDQ07001 517 aa25.66■■□□□ 1.7
VPS16-207ENST00000481812 GCC1Q96CN9 775 aa25.66■■□□□ 1.7
VPS16-207ENST00000481812 BCS1LQ9Y276 419 aa25.66■■□□□ 1.7
VPS16-207ENST00000481812 SNED1Q8TER0 1413 aa25.65■■□□□ 1.7
VPS16-207ENST00000481812 LTBP1Q14766 1721 aa25.65■■□□□ 1.7
VPS16-207ENST00000481812 XDHP47989 1333 aa25.64■■□□□ 1.7
VPS16-207ENST00000481812 C21orf2O43822 256 aa25.64■■□□□ 1.7
VPS16-207ENST00000481812 IGHDP01880 384 aa25.64■■□□□ 1.7
VPS16-207ENST00000481812 CCDC93Q567U6 631 aa25.64■■□□□ 1.7
VPS16-207ENST00000481812 RTKN2Q8IZC4 609 aa25.64■■□□□ 1.7
VPS16-207ENST00000481812 VGLL2Q8N8G2 317 aa25.64■■□□□ 1.7
VPS16-207ENST00000481812 PPP4R2Q9NY27 417 aa25.64■■□□□ 1.7
VPS16-207ENST00000481812 CEP126Q9P2H0 1117 aa25.64■■□□□ 1.7
VPS16-207ENST00000481812 EXOC6BQ9Y2D4 811 aa25.64■■□□□ 1.7
VPS16-207ENST00000481812 FER1L6Q2WGJ9 1857 aa25.64■■□□□ 1.69
VPS16-207ENST00000481812 OS9Q13438 667 aaPredicted RBP25.63■■□□□ 1.69
VPS16-207ENST00000481812 METTL24Q5JXM2 366 aa25.63■■□□□ 1.69
VPS16-207ENST00000481812 SMC5Q8IY18 1101 aa25.63■■□□□ 1.69
VPS16-207ENST00000481812 SASH1O94885 1247 aa25.62■■□□□ 1.69
VPS16-207ENST00000481812 PDE8BO95263 885 aa25.62■■□□□ 1.69
VPS16-207ENST00000481812 MPNDQ8N594 471 aa25.62■■□□□ 1.69
VPS16-207ENST00000481812 KIF1BPQ96EK5 621 aa25.62■■□□□ 1.69
VPS16-207ENST00000481812 LEMD3Q9Y2U8 911 aa25.62■■□□□ 1.69
VPS16-207ENST00000481812 GPSM2P81274 684 aa25.61■■□□□ 1.69
VPS16-207ENST00000481812 RTFDC1Q9BY42 306 aaPredicted RBP25.61■■□□□ 1.69
VPS16-207ENST00000481812 GPR108Q9NPR9 543 aa25.61■■□□□ 1.69
VPS16-207ENST00000481812 ANKIB1Q9P2G1 1089 aa25.61■■□□□ 1.69
VPS16-207ENST00000481812 NSFL1CQ9UNZ2 370 aaKnown RBP25.61■■□□□ 1.69
VPS16-207ENST00000481812 ATP2B4P23634 1241 aa25.6■■□□□ 1.69
VPS16-207ENST00000481812 UBE4AQ14139 1066 aa25.6■■□□□ 1.69
VPS16-207ENST00000481812 RHPN1Q8TCX5 695 aa25.6■■□□□ 1.69
VPS16-207ENST00000481812 TFCP2Q12800 502 aa25.59■■□□□ 1.69
VPS16-207ENST00000481812 OLFM4Q6UX06 510 aa25.59■■□□□ 1.69
VPS16-207ENST00000481812 DPP8Q6V1X1 898 aaPredicted RBP25.59■■□□□ 1.69
VPS16-207ENST00000481812 CCDC136Q96JN2 1154 aa25.59■■□□□ 1.69
VPS16-207ENST00000481812 PSMD1Q99460 953 aa25.59■■□□□ 1.69
VPS16-207ENST00000481812 ZNF219Q9P2Y4 722 aaPredicted RBP25.59■■□□□ 1.69
VPS16-207ENST00000481812 AKAP2Q9Y2D5 859 aa25.59■■□□□ 1.69
VPS16-207ENST00000481812 SUPT20HQ8NEM7 779 aa25.58■■□□□ 1.69
VPS16-207ENST00000481812 HELBQ8NG08 1087 aaPredicted RBP25.58■■□□□ 1.69
VPS16-207ENST00000481812 LRRCC1Q9C099 1032 aa25.58■■□□□ 1.69
VPS16-207ENST00000481812 GGA1Q9UJY5 639 aa25.58■■□□□ 1.69
VPS16-207ENST00000481812 WWC3Q9ULE0 1092 aa25.58■■□□□ 1.69
VPS16-207ENST00000481812 LTBP3Q9NS15 1303 aa25.58■■□□□ 1.69
VPS16-207ENST00000481812 DUOX1Q9NRD9 1551 aa25.57■■□□□ 1.68
VPS16-207ENST00000481812 TAF5LO75529 589 aa25.57■■□□□ 1.68
VPS16-207ENST00000481812 FGFR2P21802 821 aa25.57■■□□□ 1.68
VPS16-207ENST00000481812 PUM3Q15397 648 aaKnown RBP25.57■■□□□ 1.68
VPS16-207ENST00000481812 SLC51AQ86UW1 340 aa25.57■■□□□ 1.68
VPS16-207ENST00000481812 VPS33BQ9H267 617 aa25.57■■□□□ 1.68
VPS16-207ENST00000481812 YBX3P16989 372 aaKnown RBP eCLIP25.56■■□□□ 1.68
VPS16-207ENST00000481812 FKBP4Q02790 459 aaKnown RBP eCLIP25.56■■□□□ 1.68
VPS16-207ENST00000481812 C15orf52Q6ZUT6 534 aaKnown RBP25.56■■□□□ 1.68
VPS16-207ENST00000481812 TBC1D16Q8TBP0 767 aa25.56■■□□□ 1.68
VPS16-207ENST00000481812 ZNF804BA4D1E1 1349 aa25.56■■□□□ 1.68
VPS16-207ENST00000481812 KDM2BQ8NHM5 1336 aa25.56■■□□□ 1.68
VPS16-207ENST00000481812 CENPQQ7L2Z9 268 aaPredicted RBP25.55■■□□□ 1.68
VPS16-207ENST00000481812 LPIN2Q92539 896 aa25.55■■□□□ 1.68
VPS16-207ENST00000481812 POLLQ9UGP5 575 aa25.55■■□□□ 1.68
VPS16-207ENST00000481812 GRIN3BO60391 1043 aa25.54■■□□□ 1.68
VPS16-207ENST00000481812 UFL1O94874 794 aa25.54■■□□□ 1.68
VPS16-207ENST00000481812 ATP2B3Q16720 1220 aa25.54■■□□□ 1.68
VPS16-207ENST00000481812 EYA3Q99504 573 aa25.54■■□□□ 1.68
VPS16-207ENST00000481812 ARAP2Q8WZ64 1704 aa25.54■■□□□ 1.68
VPS16-207ENST00000481812 IFIT1P09914 478 aaKnown RBP25.53■■□□□ 1.68
VPS16-207ENST00000481812 KCNJ4P48050 445 aa25.53■■□□□ 1.68
VPS16-207ENST00000481812 GPR162Q16538 588 aa25.53■■□□□ 1.68
VPS16-207ENST00000481812 TNNI3KQ59H18 835 aa25.53■■□□□ 1.68
VPS16-207ENST00000481812 CLASRPQ8N2M8 674 aaKnown RBP25.53■■□□□ 1.68
VPS16-207ENST00000481812 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.53■■□□□ 1.68
VPS16-207ENST00000481812 FPGT-TNNI3KV9GXZ4 949 aa25.53■■□□□ 1.68
VPS16-207ENST00000481812 C6orf229H3BNL8 230 aa25.52■■□□□ 1.68
VPS16-207ENST00000481812 NFKBIEO00221 500 aa25.52■■□□□ 1.68
VPS16-207ENST00000481812 SLC5A1P13866 664 aa25.52■■□□□ 1.68
VPS16-207ENST00000481812 TAOK3Q9H2K8 898 aa25.52■■□□□ 1.68
VPS16-207ENST00000481812 GOLGB1Q14789 3259 aaKnown RBP25.52■■□□□ 1.68
VPS16-207ENST00000481812 IRS2Q9Y4H2 1338 aa25.52■■□□□ 1.68
VPS16-207ENST00000481812 MED23Q9ULK4 1368 aa25.52■■□□□ 1.68
VPS16-207ENST00000481812 ZNF609O15014 1411 aa25.52■■□□□ 1.68
VPS16-207ENST00000481812 A0A1B0GUL7 405 aa25.51■■□□□ 1.67
VPS16-207ENST00000481812 APBB1O00213 710 aa25.51■■□□□ 1.67
VPS16-207ENST00000481812 ANKRD45Q5TZF3 282 aa25.51■■□□□ 1.67
VPS16-207ENST00000481812 PELP1Q8IZL8 1130 aaKnown RBP25.51■■□□□ 1.67
VPS16-207ENST00000481812 NUCB1Q02818 461 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms