RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 TRIM27P14373 513 aa13.4□□□□□ -0.26
SSBP1-210ENST00000481508 ALDH1B1P30837 517 aa13.4□□□□□ -0.26
SSBP1-210ENST00000481508 LBX1P52954 281 aa13.4□□□□□ -0.26
SSBP1-210ENST00000481508 FOXO4P98177 505 aa13.4□□□□□ -0.26
SSBP1-210ENST00000481508 TTLL11Q8NHH1 800 aa13.4□□□□□ -0.26
SSBP1-210ENST00000481508 FRAT1Q92837 279 aaPredicted RBP13.4□□□□□ -0.26
SSBP1-210ENST00000481508 SUCLG2Q96I99 432 aa13.4□□□□□ -0.26
SSBP1-210ENST00000481508 PLA2G12BQ9BX93 195 aa13.4□□□□□ -0.26
SSBP1-210ENST00000481508 PRDM10Q9NQV6 1147 aa13.4□□□□□ -0.26
SSBP1-210ENST00000481508 KIF16BQ96L93 1317 aa13.39□□□□□ -0.27
SSBP1-210ENST00000481508 DDX46Q7L014 1031 aaKnown RBP13.39□□□□□ -0.27
SSBP1-210ENST00000481508 API5Q9BZZ5 524 aaKnown RBP13.39□□□□□ -0.27
SSBP1-210ENST00000481508 GREM2Q9H772 168 aa13.39□□□□□ -0.27
SSBP1-210ENST00000481508 FARP1Q9Y4F1 1045 aaPredicted RBP13.39□□□□□ -0.27
SSBP1-210ENST00000481508 CASP8AP2Q9UKL3 1982 aa13.39□□□□□ -0.27
SSBP1-210ENST00000481508 UTYO14607 1347 aa13.39□□□□□ -0.27
SSBP1-210ENST00000481508 CNTNAP1P78357 1384 aa13.38□□□□□ -0.27
SSBP1-210ENST00000481508 MLLT1Q03111 559 aaPredicted RBP13.38□□□□□ -0.27
SSBP1-210ENST00000481508 CCDC93Q567U6 631 aa13.38□□□□□ -0.27
SSBP1-210ENST00000481508 CLUAP1Q96AJ1 413 aa13.38□□□□□ -0.27
SSBP1-210ENST00000481508 USP44Q9H0E7 712 aa13.38□□□□□ -0.27
SSBP1-210ENST00000481508 ATP6V0A2Q9Y487 856 aa13.38□□□□□ -0.27
SSBP1-210ENST00000481508 CSF1RP07333 972 aa13.37□□□□□ -0.27
SSBP1-210ENST00000481508 POTEIP0CG38 1075 aa13.37□□□□□ -0.27
SSBP1-210ENST00000481508 POTEJP0CG39 1038 aa13.37□□□□□ -0.27
SSBP1-210ENST00000481508 RLBP1P12271 317 aa13.37□□□□□ -0.27
SSBP1-210ENST00000481508 CCDC152Q4G0S7 254 aa13.37□□□□□ -0.27
SSBP1-210ENST00000481508 ATF7IPQ6VMQ6 1270 aa13.37□□□□□ -0.27
SSBP1-210ENST00000481508 ARHGAP45Q92619 1136 aa13.37□□□□□ -0.27
SSBP1-210ENST00000481508 ZNF277Q9NRM2 450 aaPredicted RBP13.37□□□□□ -0.27
SSBP1-210ENST00000481508 C9orf78Q9NZ63 289 aaPredicted RBP13.37□□□□□ -0.27
SSBP1-210ENST00000481508 LTBP3Q9NS15 1303 aa13.37□□□□□ -0.27
SSBP1-210ENST00000481508 RTL9Q8NET4 1388 aa13.36□□□□□ -0.27
SSBP1-210ENST00000481508 POTECB2RU33 542 aa13.36□□□□□ -0.27
SSBP1-210ENST00000481508 CTCFP49711 727 aaPredicted RBP13.36□□□□□ -0.27
SSBP1-210ENST00000481508 ANKRD44Q8N8A2 993 aa13.36□□□□□ -0.27
SSBP1-210ENST00000481508 TAOK3Q9H2K8 898 aa13.36□□□□□ -0.27
SSBP1-210ENST00000481508 THSD7BQ9C0I4 1608 aa13.35□□□□□ -0.27
SSBP1-210ENST00000481508 CCDC85CA6NKD9 419 aa13.35□□□□□ -0.27
SSBP1-210ENST00000481508 BBOX1O75936 387 aa13.35□□□□□ -0.27
SSBP1-210ENST00000481508 VEGFAP15692 232 aaPredicted RBP13.35□□□□□ -0.27
SSBP1-210ENST00000481508 CCT4P50991 539 aaKnown RBP13.35□□□□□ -0.27
SSBP1-210ENST00000481508 RPS8P62241 208 aaKnown RBP13.35□□□□□ -0.27
SSBP1-210ENST00000481508 GPSM2P81274 684 aa13.35□□□□□ -0.27
SSBP1-210ENST00000481508 FKBP4Q02790 459 aaKnown RBP eCLIP13.35□□□□□ -0.27
SSBP1-210ENST00000481508 SOGA3Q5TF21 947 aa13.35□□□□□ -0.27
SSBP1-210ENST00000481508 ZKSCAN2Q63HK3 967 aa13.35□□□□□ -0.27
SSBP1-210ENST00000481508 INTS3Q68E01 1043 aaKnown RBP13.35□□□□□ -0.27
SSBP1-210ENST00000481508 LMBR1LQ6UX01 489 aa13.35□□□□□ -0.27
SSBP1-210ENST00000481508 SP8Q8IXZ3 490 aa13.35□□□□□ -0.27
SSBP1-210ENST00000481508 TMEM57Q8N5G2 664 aa13.35□□□□□ -0.27
SSBP1-210ENST00000481508 MEIS3Q99687 375 aa13.35□□□□□ -0.27
SSBP1-210ENST00000481508 CREBZFQ9NS37 354 aa13.35□□□□□ -0.27
SSBP1-210ENST00000481508 RCAN3Q9UKA8 241 aa13.35□□□□□ -0.27
SSBP1-210ENST00000481508 GLTPD2A6NH11 291 aa13.34□□□□□ -0.27
SSBP1-210ENST00000481508 PLIN1O60240 522 aa13.34□□□□□ -0.27
SSBP1-210ENST00000481508 HSP90B1P14625 803 aaKnown RBP13.34□□□□□ -0.27
SSBP1-210ENST00000481508 LMNB1P20700 586 aa13.34□□□□□ -0.27
SSBP1-210ENST00000481508 ITGA6P23229 1130 aa13.34□□□□□ -0.27
SSBP1-210ENST00000481508 AIDAQ96BJ3 306 aa13.34□□□□□ -0.27
SSBP1-210ENST00000481508 BICC1Q9H694 974 aaKnown RBP13.34□□□□□ -0.27
SSBP1-210ENST00000481508 WTIPA6NIX2 430 aaPredicted RBP13.33□□□□□ -0.28
SSBP1-210ENST00000481508 IPO8O15397 1037 aaKnown RBP13.33□□□□□ -0.28
SSBP1-210ENST00000481508 HSPA8P11142 646 aaKnown RBP13.33□□□□□ -0.28
SSBP1-210ENST00000481508 VEGFBP49765 207 aa13.33□□□□□ -0.28
SSBP1-210ENST00000481508 ANKRD18AQ8IVF6 992 aa13.33□□□□□ -0.28
SSBP1-210ENST00000481508 RTKN2Q8IZC4 609 aa13.33□□□□□ -0.28
SSBP1-210ENST00000481508 ZNF594Q96JF6 807 aaPredicted RBP13.33□□□□□ -0.28
SSBP1-210ENST00000481508 GPR101Q96P66 508 aaPredicted RBP13.33□□□□□ -0.28
SSBP1-210ENST00000481508 CHMP3Q9Y3E7 222 aa13.33□□□□□ -0.28
SSBP1-210ENST00000481508 SCN4AP35499 1836 aa13.32□□□□□ -0.28
SSBP1-210ENST00000481508 RABL6Q3YEC7 729 aaPredicted RBP13.32□□□□□ -0.28
SSBP1-210ENST00000481508 CC2D2BQ6DHV5 1058 aa13.32□□□□□ -0.28
SSBP1-210ENST00000481508 MPNDQ8N594 471 aa13.32□□□□□ -0.28
SSBP1-210ENST00000481508 PANK1Q8TE04 598 aa13.32□□□□□ -0.28
SSBP1-210ENST00000481508 PSMD1Q99460 953 aa13.32□□□□□ -0.28
SSBP1-210ENST00000481508 SCN9AQ15858 1988 aa13.32□□□□□ -0.28
SSBP1-210ENST00000481508 ZNF646O15015 1829 aaPredicted RBP13.32□□□□□ -0.28
SSBP1-210ENST00000481508 ADAMTSL1Q8N6G6 1762 aa13.31□□□□□ -0.28
SSBP1-210ENST00000481508 IARSP41252 1262 aaKnown RBP13.31□□□□□ -0.28
SSBP1-210ENST00000481508 AOC3Q16853 763 aa13.31□□□□□ -0.28
SSBP1-210ENST00000481508 DPP8Q6V1X1 898 aaPredicted RBP13.31□□□□□ -0.28
SSBP1-210ENST00000481508 CDC5LQ99459 802 aaKnown RBP13.31□□□□□ -0.28
SSBP1-210ENST00000481508 RTFDC1Q9BY42 306 aaPredicted RBP13.31□□□□□ -0.28
SSBP1-210ENST00000481508 POLLQ9UGP5 575 aa13.31□□□□□ -0.28
SSBP1-210ENST00000481508 LRRFIP2Q9Y608 721 aaKnown RBP13.31□□□□□ -0.28
SSBP1-210ENST00000481508 ZNF541Q9H0D2 1346 aa13.31□□□□□ -0.28
SSBP1-210ENST00000481508 ANKRD18BA2A2Z9 1011 aa13.3□□□□□ -0.28
SSBP1-210ENST00000481508 GABBR2O75899 941 aa13.3□□□□□ -0.28
SSBP1-210ENST00000481508 UBTFL1P0CB47 393 aaPredicted RBP13.3□□□□□ -0.28
SSBP1-210ENST00000481508 C20orf194Q5TEA3 1177 aa13.3□□□□□ -0.28
SSBP1-210ENST00000481508 TMC4Q7Z404 712 aa13.3□□□□□ -0.28
SSBP1-210ENST00000481508 DZIP1LQ8IYY4 767 aaKnown RBP13.3□□□□□ -0.28
SSBP1-210ENST00000481508 KLHDC4Q8TBB5 520 aa13.3□□□□□ -0.28
SSBP1-210ENST00000481508 WBP1LQ9NX94 342 aa13.3□□□□□ -0.28
SSBP1-210ENST00000481508 MINPP1Q9UNW1 487 aa13.3□□□□□ -0.28
SSBP1-210ENST00000481508 NSFL1CQ9UNZ2 370 aaKnown RBP13.3□□□□□ -0.28
SSBP1-210ENST00000481508 ZC3H4Q9UPT8 1303 aaKnown RBP13.3□□□□□ -0.28
SSBP1-210ENST00000481508 PSME4Q14997 1843 aa13.29□□□□□ -0.28
SSBP1-210ENST00000481508 RFX5P48382 616 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms