RNA–Protein interactions for RNA: ENST00000481205.5

RTN1-206, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 3,169 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-206ENST00000481205 SLAIN2Q9P270 581 aa6.59□□□□□ -1.35
RTN1-206ENST00000481205 KIF3AQ9Y496 699 aa6.59□□□□□ -1.35
RTN1-206ENST00000481205 TNS3Q68CZ2 1445 aa6.59□□□□□ -1.35
RTN1-206ENST00000481205 CYP27B1O15528 508 aa6.59□□□□□ -1.35
RTN1-206ENST00000481205 CAPN2P17655 700 aa6.59□□□□□ -1.35
RTN1-206ENST00000481205 TSR1Q2NL82 804 aaKnown RBP6.59□□□□□ -1.35
RTN1-206ENST00000481205 RINLQ6ZS11 566 aa6.59□□□□□ -1.35
RTN1-206ENST00000481205 CHAMP1Q96JM3 812 aa6.59□□□□□ -1.35
RTN1-206ENST00000481205 UPF3BQ9BZI7 483 aaKnown RBP6.59□□□□□ -1.35
RTN1-206ENST00000481205 USP44Q9H0E7 712 aa6.59□□□□□ -1.35
RTN1-206ENST00000481205 LRRFIP2Q9Y608 721 aaKnown RBP6.59□□□□□ -1.35
RTN1-206ENST00000481205 MRVI1Q9Y6F6 885 aa6.59□□□□□ -1.35
RTN1-206ENST00000481205 KDM6AO15550 1401 aaPredicted RBP6.59□□□□□ -1.36
RTN1-206ENST00000481205 SYCE3A1L190 88 aa6.59□□□□□ -1.36
RTN1-206ENST00000481205 PI4KAP2A4QPH2 592 aa6.59□□□□□ -1.36
RTN1-206ENST00000481205 MBD3O95983 291 aa6.59□□□□□ -1.36
RTN1-206ENST00000481205 CYP2E1P05181 493 aaPredicted RBP6.59□□□□□ -1.36
RTN1-206ENST00000481205 GTF2A1P52655 376 aaPredicted RBP6.59□□□□□ -1.36
RTN1-206ENST00000481205 C1QBPQ07021 282 aaKnown RBP6.59□□□□□ -1.36
RTN1-206ENST00000481205 CCDC96Q2M329 555 aa6.59□□□□□ -1.36
RTN1-206ENST00000481205 PI4KAP1Q8N8J0 262 aa6.59□□□□□ -1.36
RTN1-206ENST00000481205 NFATC2IPQ8NCF5 419 aa6.59□□□□□ -1.36
RTN1-206ENST00000481205 RNF214Q8ND24 703 aa6.59□□□□□ -1.36
RTN1-206ENST00000481205 PPP1R9BQ96SB3 815 aa6.59□□□□□ -1.36
RTN1-206ENST00000481205 OSBPL3Q9H4L5 887 aa6.59□□□□□ -1.36
RTN1-206ENST00000481205 RBM28Q9NW13 759 aaKnown RBP6.59□□□□□ -1.36
RTN1-206ENST00000481205 COL16A1Q07092 1604 aaPredicted RBP6.59□□□□□ -1.36
RTN1-206ENST00000481205 IBTKQ9P2D0 1353 aaPredicted RBP6.58□□□□□ -1.36
RTN1-206ENST00000481205 SURF6O75683 361 aaKnown RBP6.58□□□□□ -1.36
RTN1-206ENST00000481205 NBPF7P0C2Y1 421 aaPredicted RBP6.58□□□□□ -1.36
RTN1-206ENST00000481205 RFC5P40937 340 aa6.58□□□□□ -1.36
RTN1-206ENST00000481205 ATP8B2P98198 1209 aa6.58□□□□□ -1.36
RTN1-206ENST00000481205 VAC14Q08AM6 782 aa6.58□□□□□ -1.36
RTN1-206ENST00000481205 AMOTQ4VCS5 1084 aa6.58□□□□□ -1.36
RTN1-206ENST00000481205 RAPGEF4Q8WZA2 1011 aa6.58□□□□□ -1.36
RTN1-206ENST00000481205 SYAP1Q96A49 352 aaPredicted RBP6.58□□□□□ -1.36
RTN1-206ENST00000481205 SRCIN1Q9C0H9 1055 aa6.58□□□□□ -1.36
RTN1-206ENST00000481205 RBSNQ9H1K0 784 aa6.58□□□□□ -1.36
RTN1-206ENST00000481205 PARP4Q9UKK3 1724 aaKnown RBP6.58□□□□□ -1.36
RTN1-206ENST00000481205 PLEKHG2Q9H7P9 1386 aa6.58□□□□□ -1.36
RTN1-206ENST00000481205 PITPNM1O00562 1244 aa6.58□□□□□ -1.36
RTN1-206ENST00000481205 GIGYF1O75420 1035 aaPredicted RBP6.58□□□□□ -1.36
RTN1-206ENST00000481205 ZKSCAN8Q15776 578 aaPredicted RBP6.58□□□□□ -1.36
RTN1-206ENST00000481205 NRAPQ86VF7 1730 aa6.58□□□□□ -1.36
RTN1-206ENST00000481205 MAP4K4O95819 1239 aaPredicted RBP6.57□□□□□ -1.36
RTN1-206ENST00000481205 PHKG2P15735 406 aa6.57□□□□□ -1.36
RTN1-206ENST00000481205 CHMLP26374 656 aa6.57□□□□□ -1.36
RTN1-206ENST00000481205 AIMP1Q12904 312 aaKnown RBP6.57□□□□□ -1.36
RTN1-206ENST00000481205 NUTM1Q86Y26 1132 aa6.57□□□□□ -1.36
RTN1-206ENST00000481205 ADCY9O60503 1353 aa6.57□□□□□ -1.36
RTN1-206ENST00000481205 PKD1L3Q7Z443 1732 aa6.57□□□□□ -1.36
RTN1-206ENST00000481205 KDM3BQ7LBC6 1761 aa6.57□□□□□ -1.36
RTN1-206ENST00000481205 TULP2O00295 520 aa6.57□□□□□ -1.36
RTN1-206ENST00000481205 TSHZ1Q6ZSZ6 1077 aa6.57□□□□□ -1.36
RTN1-206ENST00000481205 GPT2Q8TD30 523 aa6.57□□□□□ -1.36
RTN1-206ENST00000481205 PRDM11Q9NQV5 511 aa6.57□□□□□ -1.36
RTN1-206ENST00000481205 BSDC1Q9NW68 430 aaPredicted RBP6.57□□□□□ -1.36
RTN1-206ENST00000481205 PALD1Q9ULE6 856 aa6.57□□□□□ -1.36
RTN1-206ENST00000481205 ZDHHC9Q9Y397 364 aa6.57□□□□□ -1.36
RTN1-206ENST00000481205 SHANK3Q9BYB0 1731 aa6.57□□□□□ -1.36
RTN1-206ENST00000481205 SIPA1L3O60292 1781 aaPredicted RBP6.57□□□□□ -1.36
RTN1-206ENST00000481205 TATP17735 454 aaPredicted RBP6.57□□□□□ -1.36
RTN1-206ENST00000481205 POLD1P28340 1107 aa6.57□□□□□ -1.36
RTN1-206ENST00000481205 TDO2P48775 406 aa6.57□□□□□ -1.36
RTN1-206ENST00000481205 CWF19L2Q2TBE0 894 aaKnown RBP6.57□□□□□ -1.36
RTN1-206ENST00000481205 LRSAM1Q6UWE0 723 aa6.57□□□□□ -1.36
RTN1-206ENST00000481205 REM2Q8IYK8 340 aaPredicted RBP6.57□□□□□ -1.36
RTN1-206ENST00000481205 TSC1Q92574 1164 aa6.57□□□□□ -1.36
RTN1-206ENST00000481205 STRN4Q9NRL3 753 aa6.57□□□□□ -1.36
RTN1-206ENST00000481205 TMEM63CQ9P1W3 806 aa6.57□□□□□ -1.36
RTN1-206ENST00000481205 ROBO1Q9Y6N7 1651 aa6.56□□□□□ -1.36
RTN1-206ENST00000481205 MPHOSPH10O00566 681 aaKnown RBP6.56□□□□□ -1.36
RTN1-206ENST00000481205 MYL6BP14649 208 aa6.56□□□□□ -1.36
RTN1-206ENST00000481205 C9orf131Q5VYM1 1079 aa6.56□□□□□ -1.36
RTN1-206ENST00000481205 MRRFQ96E11 262 aaKnown RBP6.56□□□□□ -1.36
RTN1-206ENST00000481205 ZNF496Q96IT1 587 aaPredicted RBP6.56□□□□□ -1.36
RTN1-206ENST00000481205 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.56□□□□□ -1.36
RTN1-206ENST00000481205 HMX1Q9NP08 348 aaPredicted RBP6.56□□□□□ -1.36
RTN1-206ENST00000481205 BABAM1Q9NWV8 329 aa6.56□□□□□ -1.36
RTN1-206ENST00000481205 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.56□□□□□ -1.36
RTN1-206ENST00000481205 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.56□□□□□ -1.36
RTN1-206ENST00000481205 SRGAP3O43295 1099 aa6.56□□□□□ -1.36
RTN1-206ENST00000481205 LMOD1P29536 600 aaPredicted RBP6.56□□□□□ -1.36
RTN1-206ENST00000481205 BEND3Q5T5X7 828 aa6.56□□□□□ -1.36
RTN1-206ENST00000481205 JARID2Q92833 1246 aaPredicted RBP6.56□□□□□ -1.36
RTN1-206ENST00000481205 USP16Q9Y5T5 823 aa6.56□□□□□ -1.36
RTN1-206ENST00000481205 TNNT1P13805 278 aa6.55□□□□□ -1.36
RTN1-206ENST00000481205 SOS2Q07890 1332 aaPredicted RBP6.55□□□□□ -1.36
RTN1-206ENST00000481205 ZNF790Q6PG37 636 aa6.55□□□□□ -1.36
RTN1-206ENST00000481205 LARP1Q6PKG0 1096 aaKnown RBP6.55□□□□□ -1.36
RTN1-206ENST00000481205 TOM1L2Q6ZVM7 507 aa6.55□□□□□ -1.36
RTN1-206ENST00000481205 PPP1R42Q7Z4L9 355 aa6.55□□□□□ -1.36
RTN1-206ENST00000481205 UNC5CLQ8IV45 518 aa6.55□□□□□ -1.36
RTN1-206ENST00000481205 DNAAF4Q8WXU2 420 aa6.55□□□□□ -1.36
RTN1-206ENST00000481205 PIK3R5Q8WYR1 880 aa6.55□□□□□ -1.36
RTN1-206ENST00000481205 SLC52A2Q9HAB3 445 aa6.55□□□□□ -1.36
RTN1-206ENST00000481205 HEG1Q9ULI3 1381 aa6.55□□□□□ -1.36
RTN1-206ENST00000481205 MAP3K2Q9Y2U5 619 aa6.55□□□□□ -1.36
RTN1-206ENST00000481205 WDR33Q9C0J8 1336 aaKnown RBP6.55□□□□□ -1.36
RTN1-206ENST00000481205 BRD1O95696 1058 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms